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Literature DB >> 24681722

Cancer genomes: discerning drivers from passengers.

Vivien Marx¹.
1. Nature and Nature Methods.

Abstract

Entities: Disease

Year: 2014 PMID： 24681722 DOI： 10.1038/nmeth.2891

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

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9 in total

1. Accumulation of driver and passenger mutations during tumor progression.

Authors: Ivana Bozic; Tibor Antal; Hisashi Ohtsuki; Hannah Carter; Dewey Kim; Sining Chen; Rachel Karchin; Kenneth W Kinzler; Bert Vogelstein; Martin A Nowak
Journal: Proc Natl Acad Sci U S A Date: 2010-09-27 Impact factor: 11.205

2. Comment on "The consensus coding sequences of human breast and colorectal cancers".

Authors: Gad Getz; Holger Höfling; Jill P Mesirov; Todd R Golub; Matthew Meyerson; Robert Tibshirani; Eric S Lander
Journal: Science Date: 2007-09-14 Impact factor: 47.728

3. Computational approaches to identify functional genetic variants in cancer genomes.

Authors: Abel Gonzalez-Perez; Ville Mustonen; Boris Reva; Graham R S Ritchie; Pau Creixell; Rachel Karchin; Miguel Vazquez; J Lynn Fink; Karin S Kassahn; John V Pearson; Gary D Bader; Paul C Boutros; Lakshmi Muthuswamy; B F Francis Ouellette; Jüri Reimand; Rune Linding; Tatsuhiro Shibata; Alfonso Valencia; Adam Butler; Serge Dronov; Paul Flicek; Nick B Shannon; Hannah Carter; Li Ding; Chris Sander; Josh M Stuart; Lincoln D Stein; Nuria Lopez-Bigas
Journal: Nat Methods Date: 2013-08 Impact factor: 28.547

Review 4. Cancer genome landscapes.

Authors: Bert Vogelstein; Nickolas Papadopoulos; Victor E Velculescu; Shibin Zhou; Luis A Diaz; Kenneth W Kinzler
Journal: Science Date: 2013-03-29 Impact factor: 47.728

5. Highly recurrent TERT promoter mutations in human melanoma.

Authors: Franklin W Huang; Eran Hodis; Mary Jue Xu; Gregory V Kryukov; Lynda Chin; Levi A Garraway
Journal: Science Date: 2013-01-24 Impact factor: 47.728

6. Genome sequencing identifies a basis for everolimus sensitivity.

Authors: Gopa Iyer; Aphrothiti J Hanrahan; Matthew I Milowsky; Hikmat Al-Ahmadie; Sasinya N Scott; Manickam Janakiraman; Mono Pirun; Chris Sander; Nicholas D Socci; Irina Ostrovnaya; Agnes Viale; Adriana Heguy; Luke Peng; Timothy A Chan; Bernard Bochner; Dean F Bajorin; Michael F Berger; Barry S Taylor; David B Solit
Journal: Science Date: 2012-08-23 Impact factor: 47.728

7. Discovery and saturation analysis of cancer genes across 21 tumour types.

Authors: Michael S Lawrence; Petar Stojanov; Craig H Mermel; James T Robinson; Levi A Garraway; Todd R Golub; Matthew Meyerson; Stacey B Gabriel; Eric S Lander; Gad Getz
Journal: Nature Date: 2014-01-05 Impact factor: 49.962

8. Comprehensive identification of mutational cancer driver genes across 12 tumor types.

Authors: David Tamborero; Abel Gonzalez-Perez; Christian Perez-Llamas; Jordi Deu-Pons; Cyriac Kandoth; Jüri Reimand; Michael S Lawrence; Gad Getz; Gary D Bader; Li Ding; Nuria Lopez-Bigas
Journal: Sci Rep Date: 2013-10-02 Impact factor: 4.379

9. IntOGen-mutations identifies cancer drivers across tumor types.

Authors: Abel Gonzalez-Perez; Christian Perez-Llamas; Jordi Deu-Pons; David Tamborero; Michael P Schroeder; Alba Jene-Sanz; Alberto Santos; Nuria Lopez-Bigas
Journal: Nat Methods Date: 2013-09-15 Impact factor: 28.547

9 in total

13 in total

Review 1. Genomics in acute lymphoblastic leukaemia: insights and treatment implications.

Authors: Kathryn G Roberts; Charles G Mullighan
Journal: Nat Rev Clin Oncol Date: 2015-03-17 Impact factor: 66.675

2. Truncation- and motif-based pan-cancer analysis reveals tumor-suppressing kinases.

Authors: Andrew M Hudson; Natalie L Stephenson; Cynthia Li; Eleanor Trotter; Adam J Fletcher; Gitta Katona; Patrycja Bieniasz-Krzywiec; Matthew Howell; Chris Wirth; Simon Furney; Crispin J Miller; John Brognard
Journal: Sci Signal Date: 2018-04-17 Impact factor: 8.192

3. Quantifying gene selection in cancer through protein functional alteration bias.

Authors: Nadav Brandes; Nathan Linial; Michal Linial
Journal: Nucleic Acids Res Date: 2019-07-26 Impact factor: 16.971

4. p53 aberrations in low grade endometrioid carcinoma of the endometrium with nodal metastases: possible insights on pathogenesis discerned from immunohistochemistry.

Authors: Oluwole Fadare; Vinita Parkash
Journal: Diagn Pathol Date: 2017-11-14 Impact factor: 2.644

5. A data mining approach for identifying pathway-gene biomarkers for predicting clinical outcome: A case study of erlotinib and sorafenib.

Authors: David G Covell
Journal: PLoS One Date: 2017-08-08 Impact factor: 3.240

6. Pan-Cancer Mutational and Transcriptional Analysis of the Integrator Complex.

Authors: Antonio Federico; Monica Rienzo; Ciro Abbondanza; Valerio Costa; Alfredo Ciccodicola; Amelia Casamassimi
Journal: Int J Mol Sci Date: 2017-04-29 Impact factor: 5.923

7. Non-coding cancer driver candidates identified with a sample- and position-specific model of the somatic mutation rate.

Authors: Malene Juul; Johanna Bertl; Qianyun Guo; Morten Muhlig Nielsen; Michał Świtnicki; Henrik Hornshøj; Tobias Madsen; Asger Hobolth; Jakob Skou Pedersen
Journal: Elife Date: 2017-03-31 Impact factor: 8.140