Literature DB >> 17872428

Comment on "The consensus coding sequences of human breast and colorectal cancers".

Gad Getz1, Holger Höfling, Jill P Mesirov, Todd R Golub, Matthew Meyerson, Robert Tibshirani, Eric S Lander.   

Abstract

Sjöblom et al. (Research Article, 13 October 2006, p. 268) reported nearly 200 novel cancer genes said to have a 90% probability of being involved in colon or breast cancer. However, their analysis raises two statistical concerns. When these concerns are addressed, few genes with significantly elevated mutation rates remain. Although the biological methodology in Sjöblom et al. is sound, more samples are needed to achieve sufficient power.

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Mesh:

Year:  2007        PMID: 17872428     DOI: 10.1126/science.1138764

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  74 in total

1.  Germline PKHD1 mutations are protective against colorectal cancer.

Authors:  Christopher J Ward; Yanhong Wu; Ruth A Johnson; John R Woollard; Eric J Bergstralh; Mine S Cicek; Jason Bakeberg; Sandro Rossetti; Christina M Heyer; Gloria M Petersen; Noralene M Lindor; Stephen N Thibodeau; Peter C Harris; Vicente E Torres; Marie C Hogan; Lisa A Boardman
Journal:  Hum Genet       Date:  2011-01-28       Impact factor: 4.132

Review 2.  Emerging patterns of somatic mutations in cancer.

Authors:  Ian R Watson; Koichi Takahashi; P Andrew Futreal; Lynda Chin
Journal:  Nat Rev Genet       Date:  2013-09-11       Impact factor: 53.242

3.  PathScan: a tool for discerning mutational significance in groups of putative cancer genes.

Authors:  Michael C Wendl; John W Wallis; Ling Lin; Cyriac Kandoth; Elaine R Mardis; Richard K Wilson; Li Ding
Journal:  Bioinformatics       Date:  2011-04-14       Impact factor: 6.937

Review 4.  Clinical implications of the cancer genome.

Authors:  Laura E Macconaill; Levi A Garraway
Journal:  J Clin Oncol       Date:  2010-10-25       Impact factor: 44.544

5.  Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation.

Authors:  Guangwu Guo; Xiaojuan Sun; Chao Chen; Song Wu; Peide Huang; Zesong Li; Michael Dean; Yi Huang; Wenlong Jia; Quan Zhou; Aifa Tang; Zuoquan Yang; Xianxin Li; Pengfei Song; Xiaokun Zhao; Rui Ye; Shiqiang Zhang; Zhao Lin; Mingfu Qi; Shengqing Wan; Liangfu Xie; Fan Fan; Michael L Nickerson; Xiangjun Zou; Xueda Hu; Li Xing; Zhaojie Lv; Hongbin Mei; Shengjie Gao; Chaozhao Liang; Zhibo Gao; Jingxiao Lu; Yuan Yu; Chunxiao Liu; Lin Li; Xiaodong Fang; Zhimao Jiang; Jie Yang; Cailing Li; Xin Zhao; Jing Chen; Fang Zhang; Yongqi Lai; Zheguang Lin; Fangjian Zhou; Hao Chen; Hsiao Chang Chan; Shirley Tsang; Dan Theodorescu; Yingrui Li; Xiuqing Zhang; Jian Wang; Huanming Yang; Yaoting Gui; Jun Wang; Zhiming Cai
Journal:  Nat Genet       Date:  2013-10-13       Impact factor: 38.330

Review 6.  Making sense of cancer genomic data.

Authors:  Lynda Chin; William C Hahn; Gad Getz; Matthew Meyerson
Journal:  Genes Dev       Date:  2011-03-15       Impact factor: 11.361

7.  Somatic mutation as a mechanism of Wnt/β-catenin pathway activation in CLL.

Authors:  Lili Wang; Alex K Shalek; Mike Lawrence; Ruihua Ding; Jellert T Gaublomme; Nathalie Pochet; Petar Stojanov; Carrie Sougnez; Sachet A Shukla; Kristen E Stevenson; Wandi Zhang; Jessica Wong; Quinlan L Sievers; Bryan T MacDonald; Alexander R Vartanov; Natalie R Goldstein; Donna Neuberg; Xi He; Eric Lander; Nir Hacohen; Aviv Regev; Gad Getz; Jennifer R Brown; Hongkun Park; Catherine J Wu
Journal:  Blood       Date:  2014-04-28       Impact factor: 22.113

Review 8.  Cancer gene discovery in mouse and man.

Authors:  Jenny Mattison; Louise van der Weyden; Tim Hubbard; David J Adams
Journal:  Biochim Biophys Acta       Date:  2009-03-12

9.  Comprehensive genomic characterization defines human glioblastoma genes and core pathways.

Authors: 
Journal:  Nature       Date:  2008-09-04       Impact factor: 49.962

Review 10.  Analytical methods for inferring functional effects of single base pair substitutions in human cancers.

Authors:  William Lee; Peng Yue; Zemin Zhang
Journal:  Hum Genet       Date:  2009-05-12       Impact factor: 4.132

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