Literature DB >> 24671694

Influence of metal-peptide complexation on fragmentation and inter-fragment hydrogen migration in electron transfer dissociation.

Daiki Asakawa1, Takae Takeuchi, Asuka Yamashita, Yoshinao Wada.   

Abstract

The use of metal salts in electrospray ionization (ESI) of peptides increases the charge state of peptide ions, facilitating electron transfer dissociation (ETD) in tandem mass spectrometry. In the present study, K(+) and Ca(2+) were used as charge carriers to form multiply-charged metal-peptide complexes. ETD of the potassium- or calcium-peptide complex was initiated by transfer of an electron to a proton remote from the metal cation, and a c'-z• fragment complex, in which the c' and z• fragments were linked together via a metal cation coordinating with several amino acid residues, was formed. The presence of a metal cation in the precursor for ETD increased the lifetime of the c'-z• fragment complex, eventually generating c• and z' fragments through inter-fragment hydrogen migration. The degree of hydrogen migration was dependent on the location of the metal cation in the metal-peptide complex, but was not reconciled with conformation of the precursor ion obtained by molecular mechanics simulation. In contrast, the location of the metal cation in the intermediate suggested by the ETD spectrum was in agreement with the conformation of "proton-removed" precursors, indicating that the charge reduction of precursor ions by ETD induces conformational rearrangement during the fragmentation process.

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Year:  2014        PMID: 24671694     DOI: 10.1007/s13361-014-0855-6

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  24 in total

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Authors:  R A Zubarev; D M Horn; E K Fridriksson; N L Kelleher; N A Kruger; M A Lewis; B K Carpenter; F W McLafferty
Journal:  Anal Chem       Date:  2000-02-01       Impact factor: 6.986

2.  Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

Authors:  John E P Syka; Joshua J Coon; Melanie J Schroeder; Jeffrey Shabanowitz; Donald F Hunt
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

3.  Effects of charge state and cationizing agent on the electron capture dissociation of a peptide.

Authors:  Anthony T Iavarone; Kolja Paech; Evan R Williams
Journal:  Anal Chem       Date:  2004-04-15       Impact factor: 6.986

4.  Use of a double resonance electron capture dissociation experiment to probe fragment intermediate lifetimes.

Authors:  Cheng Lin; Jason J Cournoyer; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2006-08-09       Impact factor: 3.109

5.  Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos.

Authors:  Christian K Frese; A F Maarten Altelaar; Marco L Hennrich; Dirk Nolting; Martin Zeller; Jens Griep-Raming; Albert J R Heck; Shabaz Mohammed
Journal:  J Proteome Res       Date:  2011-04-01       Impact factor: 4.466

Review 6.  Peptide radicals and cation radicals in the gas phase.

Authors:  František Tureček; Ryan R Julian
Journal:  Chem Rev       Date:  2013-05-07       Impact factor: 60.622

7.  Influence of charge state and amino acid composition on hydrogen transfer in electron capture dissociation of peptides.

Authors:  Takashi Nishikaze; Mitsuo Takayama
Journal:  J Am Soc Mass Spectrom       Date:  2010-08-21       Impact factor: 3.109

8.  Divalent metal ion-peptide interactions probed by electron capture dissociation of trications.

Authors:  Haichuan Liu; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2006-09-06       Impact factor: 3.109

9.  Comprehensive analysis of Gly-Leu-Gly-Gly-Lys peptide dication structures and cation-radical dissociations following electron transfer: from electron attachment to backbone cleavage, ion-molecule complexes, and fragment separation.

Authors:  Robert Pepin; Kenneth J Laszlo; Bo Peng; Aleš Marek; Matthew F Bush; František Tureček
Journal:  J Phys Chem A       Date:  2013-12-18       Impact factor: 2.781

10.  Collisions or electrons? Protein sequence analysis in the 21st century.

Authors:  Joshua J Coon
Journal:  Anal Chem       Date:  2009-05-01       Impact factor: 6.986

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  6 in total

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Authors:  Mohammad A Halim; Luke MacAleese; Jérôme Lemoine; Rodolphe Antoine; Philippe Dugourd; Marion Girod
Journal:  J Am Soc Mass Spectrom       Date:  2017-10-04       Impact factor: 3.109

2.  Effects of acidic peptide size and sequence on trivalent praseodymium adduction and electron transfer dissociation mass spectrometry.

Authors:  Juliette J Commodore; Carolyn J Cassady
Journal:  J Mass Spectrom       Date:  2017-04       Impact factor: 1.982

3.  Difference of Electron Capture and Transfer Dissociation Mass Spectrometry on Ni(2+)-, Cu(2+)-, and Zn(2+)-Polyhistidine Complexes in the Absence of Remote Protons.

Authors:  Daiki Asakawa; Edwin De Pauw
Journal:  J Am Soc Mass Spectrom       Date:  2016-04-20       Impact factor: 3.109

4.  The Effects of Trivalent Lanthanide Cationization on the Electron Transfer Dissociation of Acidic Fibrinopeptide B and its Analogs.

Authors:  Juliette J Commodore; Carolyn J Cassady
Journal:  J Am Soc Mass Spectrom       Date:  2016-06-13       Impact factor: 3.109

5.  Electron transfer dissociation mass spectrometry of acidic phosphorylated peptides cationized with trivalent praseodymium.

Authors:  Juliette J Commodore; Carolyn J Cassady
Journal:  J Mass Spectrom       Date:  2018-12       Impact factor: 1.982

6.  Replacing H+ by Na+ or K+ in phosphopeptide anions and cations prevents electron capture dissociation.

Authors:  Eva-Maria Schneeberger; Kathrin Breuker
Journal:  Chem Sci       Date:  2018-07-26       Impact factor: 9.825

  6 in total

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