Literature DB >> 24670990

Conversion of a Rhizopus chinensis lipase into an esterase by lid swapping.

Xiao-Wei Yu1, Shan-Shan Zhu2, Rong Xiao3, Yan Xu1.   

Abstract

In an effort to explore the feasibility of converting a lipase into an esterase by modifying the lid region, we designed and characterized two novel Rhizopus chinensis lipase variants by lid swapping. The substrate specificity of an R. chinensis lipase was successfully modified toward water-soluble substrates, that is, turned into an esterase, by replacing the hydrophobic lid with a hydrophilic lid from ferulic acid esterase from Aspergillus niger Meanwhile, as a comparison, the lid of R. chinensis lipase was replaced by a hydrophobic lid from Rhizomucor miehei lipase, which did not alter its substrate specificity but led to a 5.4-fold higher catalytic efficiency (k*cat/K*m) toward p-nitrophenyl laurate. Based on the analysis of structure-function relationships, it suggests that the amphipathic nature of the lid is very important for the substrate specificity. This study provides new insight into the structural basis of lipase specificities and a way to tune the substrate preference of lipases.
Copyright © 2014 by the American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  chain-length specificity • chimera • domain exchange

Mesh:

Substances:

Year:  2014        PMID: 24670990      PMCID: PMC4031936          DOI: 10.1194/jlr.M043950

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


  28 in total

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3.  Understanding the plasticity of the alpha/beta hydrolase fold: lid swapping on the Candida antarctica lipase B results in chimeras with interesting biocatalytic properties.

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Journal:  Chembiochem       Date:  2009-02-13       Impact factor: 3.164

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Journal:  J Biochem       Date:  1996-09       Impact factor: 3.387

5.  Simultaneous introduction of multiple mutations using overlap extension PCR.

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Journal:  Biotechniques       Date:  1997-01       Impact factor: 1.993

6.  Theoretical investigation of the dynamics of the active site lid in Rhizomucor miehei lipase.

Authors:  G H Peters; O H Olsen; A Svendsen; R C Wade
Journal:  Biophys J       Date:  1996-07       Impact factor: 4.033

7.  Automated protein structure modeling with SWISS-MODEL Workspace and the Protein Model Portal.

Authors:  Lorenza Bordoli; Torsten Schwede
Journal:  Methods Mol Biol       Date:  2012

8.  Enhancing thermostability of a Rhizomucor miehei lipase by engineering a disulfide bond and displaying on the yeast cell surface.

Authors:  Zhen-lin Han; Shuang-yan Han; Sui-ping Zheng; Ying Lin
Journal:  Appl Microbiol Biotechnol       Date:  2009-06-17       Impact factor: 4.813

9.  Catalysis at the interface: the anatomy of a conformational change in a triglyceride lipase.

Authors:  U Derewenda; A M Brzozowski; D M Lawson; Z S Derewenda
Journal:  Biochemistry       Date:  1992-02-11       Impact factor: 3.162

Review 10.  Distinction between esterases and lipases: comparative biochemical properties of sequence-related carboxylesterases.

Authors:  H Chahinian; L Sarda
Journal:  Protein Pept Lett       Date:  2009       Impact factor: 1.890

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  6 in total

1.  Semi-rational evolution of the 3-(3-hydroxyalkanoyloxy)alkanoate (HAA) synthase RhlA to improve rhamnolipid production in Pseudomonas aeruginosa and Burkholderia glumae.

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Journal:  FEBS J       Date:  2019-06-21       Impact factor: 5.542

Review 2.  Cold Active Lipases: Biocatalytic Tools for Greener Technology.

Authors:  Nutan Mhetras; Vidhyashri Mapare; Digambar Gokhale
Journal:  Appl Biochem Biotechnol       Date:  2021-02-05       Impact factor: 2.926

Review 3.  The Lid Domain in Lipases: Structural and Functional Determinant of Enzymatic Properties.

Authors:  Faez Iqbal Khan; Dongming Lan; Rabia Durrani; Weiqian Huan; Zexin Zhao; Yonghua Wang
Journal:  Front Bioeng Biotechnol       Date:  2017-03-09

4.  N-terminal domain replacement changes an archaeal monoacylglycerol lipase into a triacylglycerol lipase.

Authors:  Surabhi Soni; Sneha S Sathe; Rutuja R Sheth; Prince Tiwari; Rajesh-Kumar N Vadgama; Annamma Anil Odaneth; Arvind M Lali; Sanjeev K Chandrayan
Journal:  Biotechnol Biofuels       Date:  2019-05-06       Impact factor: 6.040

5.  Characterization of an Aspergillus niger for Efficient Fatty Acid Ethyl Ester Synthesis in Aqueous Phase and the Molecular Mechanism.

Authors:  Youqiang Xu; Huiqin Huang; Hongyun Lu; Mengqin Wu; Mengwei Lin; Chunsheng Zhang; Zhigang Zhao; Weiwei Li; Chengnan Zhang; Xiuting Li; Baoguo Sun
Journal:  Front Microbiol       Date:  2022-02-21       Impact factor: 5.640

6.  Improving the Thermostability of Rhizopus chinensis Lipase Through Site-Directed Mutagenesis Based on B-Factor Analysis.

Authors:  Zhanbao Jiang; Chengbo Zhang; Minyuan Tang; Bo Xu; Lili Wang; Wen Qian; Jiandong He; Zhihong Zhao; Qian Wu; Yuelin Mu; Junmei Ding; Rui Zhang; Zunxi Huang; Nanyu Han
Journal:  Front Microbiol       Date:  2020-03-03       Impact factor: 5.640

  6 in total

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