Literature DB >> 24670208

A general and enantioselective approach to pentoses: a rapid synthesis of PSI-6130, the nucleoside core of sofosbuvir.

Manuel Peifer1, Raphaëlle Berger, Valerie W Shurtleff, Jay C Conrad, David W C MacMillan.   

Abstract

An efficient route towards biologically relevant pentose derivatives is described. The de novo synthetic strategy features an enantioselective α-oxidation reaction enabled by a chiral amine in conjunction with copper(II) catalysis. A subsequent Mukaiyama aldol coupling allows for the incorporation of a wide array of modular two-carbon fragments. Lactone intermediates accessed via this route provide a useful platform for elaboration, as demonstrated by the preparation of a variety of C-nucleosides and fluorinated pentoses. Finally, this work has facilitated expedient syntheses of pharmaceutically active compounds currently in clinical use.

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Year:  2014        PMID: 24670208      PMCID: PMC4210058          DOI: 10.1021/ja502205q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


Carbohydrates represent compounds of both vast abundance and fundamental biological importance. Within this class, five-carbon saccharides (pentoses) are perhaps most readily recognized as the structural monomers composing the backbones of DNA and RNA, which enable the replication, transcription, and translation of genetic information. In addition, the ribose derivative adenosine triphosphate (ATP) represents the molecular unit of energy, while a variety of other elaborated pentoses serve as cofactors crucial to enzyme function.[1] It is not surprising, therefore, that nucleoside frameworks are found at the core of many pharmaceutically active compounds and that significant research effort has been expended to gain synthetic access to non-natural pentose analogs.[2] The most common strategy to build enantioenriched nucleosides is to employ natural sugars as starting materials;[3] however, these protocols are typically protracted by the need to discriminate among four chemically similar hydroxyl groups, which further limits opportunities for the incorporation of unnatural moieties and stereochemical information. Clearly, an attractive alternative would involve a de novo synthetic sequence that rapidly and enantioselectively couples prefabricated fragments and is amenable to broad diversification of functional groups and nucleoside stereochemistry.[4−6] In 2004, our group described a two-step synthesis of orthogonally protected hexoses applying an enantioselective proline-catalyzed aldol coupling followed by a Lewis acid-mediated, diastereoselective Mukaiyama aldol reaction (eq 1). This approach allows for the rapid and asymmetric construction of gluco-, manno-, and allo-configured carbohydrates from simple starting materials.[7] We questioned whether a similar strategy might provide access to their 5-carbon, nucleoside counterparts, beginning with the enantioselective catalytic production of an α,β-dioxygenated aldehyde (eq 2). By analogy to our hexose synthesis, we envisioned that this enantioenriched aldehyde could undergo aldol coupling to build the requisite nucleoside skeleton. Importantly, such a strategy would employ catalysis-derived starting materials in place of chiral pool precursors (e.g., isopropylidene-protected glyceraldehydes),[8] which have been shown to be poorly or nonselective in similar de novo nucleoside syntheses.[9] Moreover, our building blocks would be easily modified to provide a variety of differentially substituted products and would allow for preinstallation of protecting groups, thereby obviating the need for extraneous protection–deprotection sequences. Herein we describe the successful execution of these design ideals and outline a generic and enantioselective route to nucleoside architecture.
  11 in total

1.  Modern Methods of Monosaccharide Synthesis from Non-Carbohydrate Sources.

Authors:  Tomas Hudlicky; David A. Entwistle; Kevin K. Pitzer; Andrew J. Thorpe
Journal:  Chem Rev       Date:  1996-05-09       Impact factor: 60.622

2.  Two-step synthesis of carbohydrates by selective aldol reactions.

Authors:  Alan B Northrup; David W C MacMillan
Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

3.  A general approach to the enantioselective α-oxidation of aldehydes via synergistic catalysis.

Authors:  Scott P Simonovich; Jeffrey F Van Humbeck; David W C Macmillan
Journal:  Chem Sci       Date:  2012       Impact factor: 9.825

4.  An asymmetric approach to 2-deoxynucleosides via organosulfur building blocks as chemical chameleons.

Authors:  B M Trost; C Nübling
Journal:  Carbohydr Res       Date:  1990-07-15       Impact factor: 2.104

Review 5.  The Mukaiyama aldol reaction: 40 years of continuous development.

Authors:  Jun-ichi Matsuo; Masahiro Murakami
Journal:  Angew Chem Int Ed Engl       Date:  2013-07-23       Impact factor: 15.336

6.  Concerning the mechanism of the FeCl3-catalyzed alpha-oxyamination of aldehydes: evidence for a non-SOMO activation pathway.

Authors:  Jeffrey F Van Humbeck; Scott P Simonovich; Robert R Knowles; David W C MacMillan
Journal:  J Am Chem Soc       Date:  2010-07-28       Impact factor: 15.419

7.  Design, synthesis, and antiviral activity of 2'-deoxy-2'-fluoro-2'-C-methylcytidine, a potent inhibitor of hepatitis C virus replication.

Authors:  Jeremy L Clark; Laurent Hollecker; J Christian Mason; Lieven J Stuyver; Phillip M Tharnish; Stefania Lostia; Tamara R McBrayer; Raymond F Schinazi; Kyoichi A Watanabe; Michael J Otto; Phillip A Furman; Wojciech J Stec; Steven E Patterson; Krzysztof W Pankiewicz
Journal:  J Med Chem       Date:  2005-08-25       Impact factor: 7.446

8.  Fluorinated Nucleosides: Synthesis and Biological Implication.

Authors:  Peng Liu; Ashoke Sharon; Chung K Chu
Journal:  J Fluor Chem       Date:  2008-09       Impact factor: 2.050

9.  Discovery of a β-d-2'-deoxy-2'-α-fluoro-2'-β-C-methyluridine nucleotide prodrug (PSI-7977) for the treatment of hepatitis C virus.

Authors:  Michael J Sofia; Donghui Bao; Wonsuk Chang; Jinfa Du; Dhanapalan Nagarathnam; Suguna Rachakonda; P Ganapati Reddy; Bruce S Ross; Peiyuan Wang; Hai-Ren Zhang; Shalini Bansal; Christine Espiritu; Meg Keilman; Angela M Lam; Holly M Micolochick Steuer; Congrong Niu; Michael J Otto; Phillip A Furman
Journal:  J Med Chem       Date:  2010-10-14       Impact factor: 7.446

10.  An efficient and diastereoselective synthesis of PSI-6130: a clinically efficacious inhibitor of HCV NS5B polymerase.

Authors:  Peiyuan Wang; Byoung-Kwon Chun; Suguna Rachakonda; Jinfa Du; Noshena Khan; Junxing Shi; Wojciech Stec; Darryl Cleary; Bruce S Ross; Michael J Sofia
Journal:  J Org Chem       Date:  2009-09-04       Impact factor: 4.354

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1.  Synthesis of (2S)-2-Chloro-2-fluororibolactone via Stereoselective Electrophilic Fluorination.

Authors:  Coralie De Schutter; Ozkan Sari; Steven J Coats; Franck Amblard; Raymond F Schinazi
Journal:  J Org Chem       Date:  2017-12-04       Impact factor: 4.354

2.  A Semi-Synthetic Glycoconjugate Vaccine Candidate for Carbapenem-Resistant Klebsiella pneumoniae.

Authors:  Peter H Seeberger; Claney L Pereira; Naeem Khan; Guozhi Xiao; Elizabeth Diago-Navarro; Katrin Reppe; Bastian Opitz; Bettina C Fries; Martin Witzenrath
Journal:  Angew Chem Int Ed Engl       Date:  2017-10-05       Impact factor: 15.336

Review 3.  Recent advances in the discovery of potent RNA-dependent RNA-polymerase (RdRp) inhibitors targeting viruses.

Authors:  Rahul Kumar; Sahil Mishra; Sushil K Maurya
Journal:  RSC Med Chem       Date:  2020-12-23

4.  One-electron oxidation of gemcitabine and analogs: mechanism of formation of C3' and C2' sugar radicals.

Authors:  Amitava Adhikary; Anil Kumar; Ramanjaneyulu Rayala; Ragda M Hindi; Ananya Adhikary; Stanislaw F Wnuk; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2014-10-23       Impact factor: 15.419

Review 5.  Mesenchymal Stromal Cells for Antineoplastic Drug Loading and Delivery.

Authors:  Francesco Petrella; Isabella Rimoldi; Stefania Rizzo; Lorenzo Spaggiari
Journal:  Medicines (Basel)       Date:  2017-11-23

6.  A highly diastereoselective "super silyl" governed aldol reaction: synthesis of α,β-dioxyaldehydes and 1,2,3-triols.

Authors:  Wafa Gati; Hisashi Yamamoto
Journal:  Chem Sci       Date:  2015-10-06       Impact factor: 9.825

Review 7.  Non-nucleoside structured compounds with antiviral activity-past 10 years (2010-2020).

Authors:  Marta Denel-Bobrowska; Agnieszka B Olejniczak
Journal:  Eur J Med Chem       Date:  2022-01-19       Impact factor: 7.088

8.  Efficient synthesis of antiviral agent uprifosbuvir enabled by new synthetic methods.

Authors:  Artis Klapars; John Y L Chung; John Limanto; Ralph Calabria; Louis-Charles Campeau; Kevin R Campos; Wenyong Chen; Stephen M Dalby; Tyler A Davis; Daniel A DiRocco; Alan M Hyde; Amude M Kassim; Mona Utne Larsen; Guiquan Liu; Peter E Maligres; Aaron Moment; Feng Peng; Rebecca T Ruck; Michael Shevlin; Bryon L Simmons; Zhiguo Jake Song; Lushi Tan; Timothy J Wright; Susan L Zultanski
Journal:  Chem Sci       Date:  2021-05-19       Impact factor: 9.825

Review 9.  Recent advances in synthetic approaches for medicinal chemistry of C-nucleosides.

Authors:  Kartik Temburnikar; Katherine L Seley-Radtke
Journal:  Beilstein J Org Chem       Date:  2018-04-05       Impact factor: 2.883

10.  Nucleophilic Substitution in Solution: Activation Strain Analysis of Weak and Strong Solvent Effects.

Authors:  Trevor A Hamlin; Bas van Beek; Lando P Wolters; F Matthias Bickelhaupt
Journal:  Chemistry       Date:  2018-03-24       Impact factor: 5.236

  10 in total

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