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Literature DB >> 24664318

A requiem to the nuclear matrix: from a controversial concept to 3D organization of the nucleus.

S V Razin¹, O V Iarovaia, Y S Vassetzky.

Abstract

The first papers coining the term "nuclear matrix" were published 40 years ago. Here, we review the data obtained during the nuclear matrix studies and discuss the contribution of this controversial concept to our current understanding of nuclear architecture and three-dimensional organization of genome.

Mesh：

Substances：
Proteins

Year: 2014 PMID： 24664318 DOI： 10.1007/s00412-014-0459-8

Source DB: PubMed Journal: Chromosoma ISSN： 0009-5915 Impact factor: 4.316

128 in total

1. INMP, a novel intranuclear matrix protein related to the family of intermediate filament-like proteins: molecular cloning and sequence analysis.

Authors: K Menz; N Radomski; E Jost
Journal: Biochim Biophys Acta Date: 1996-11-11

2. [Localization of regions of DNA attachment to the nuclear skeleton within chicken alpha-globin genes in functionally active and functionally inactive nuclei].

Authors: S V Razin; J Rzeszowska-Wolny; J Moreau; K Scherrer
Journal: Mol Biol (Mosk) Date: 1985 Mar-Apr

3. Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites.

Authors: P N Cockerill; W T Garrard
Journal: Cell Date: 1986-01-31 Impact factor: 41.582

4. Chromatin dynamics in living cells: identification of oscillatory motion.

Authors: Artem Pliss; Kishore S Malyavantham; Sambit Bhattacharya; Ronald Berezney
Journal: J Cell Physiol Date: 2013-03 Impact factor: 6.384

5. Isolation and characterization of the nuclear matrix in Friend erythroleukemia cells: chromatin and hnRNA interactions with the nuclear matrix.

Authors: B H Long; C Y Huang; A O Pogo
Journal: Cell Date: 1979-12 Impact factor: 41.582

6. Replication origins are attached to the nuclear skeleton.

Authors: S V Razin; M G Kekelidze; E M Lukanidin; K Scherrer; G P Georgiev
Journal: Nucleic Acids Res Date: 1986-10-24 Impact factor: 16.971

7. The similarity of DNA sequences remaining bound to scaffold upon nuclease treatment of interphase nuclei and metaphase chromosomes.

Authors: S V Razin; V L Mantieva; G P Georgiev
Journal: Nucleic Acids Res Date: 1979-11-24 Impact factor: 16.971

8. In situ localization of DNA topoisomerase II, a major polypeptide component of the Drosophila nuclear matrix fraction.

Authors: M Berrios; N Osheroff; P A Fisher
Journal: Proc Natl Acad Sci U S A Date: 1985-06 Impact factor: 11.205

A requiem to the nuclear matrix: from a controversial concept to 3D organization of the nucleus.

1. INMP, a novel intranuclear matrix protein related to the family of intermediate filament-like proteins: molecular cloning and sequence analysis.

2. [Localization of regions of DNA attachment to the nuclear skeleton within chicken alpha-globin genes in functionally active and functionally inactive nuclei].

3. Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites.

4. Chromatin dynamics in living cells: identification of oscillatory motion.

5. Isolation and characterization of the nuclear matrix in Friend erythroleukemia cells: chromatin and hnRNA interactions with the nuclear matrix.

6. Replication origins are attached to the nuclear skeleton.

7. The similarity of DNA sequences remaining bound to scaffold upon nuclease treatment of interphase nuclei and metaphase chromosomes.

8. In situ localization of DNA topoisomerase II, a major polypeptide component of the Drosophila nuclear matrix fraction.

9. Characterization of nuclear structures containing superhelical DNA.

10. NMPdb: Database of Nuclear Matrix Proteins.

Review 1. PML nuclear bodies: assembly and oxidative stress-sensitive sumoylation.

Review 2. Regulation of transcription by long noncoding RNAs.

Review 3. Non-coding RNAs in chromatin folding and nuclear organization.

Review 4. Dynamics of double strand breaks and chromosomal translocations.

5. Regulatory Elements in Vectors for Efficient Generation of Cell Lines Producing Target Proteins.

6. The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes.

7. CK2-Dependent Phosphorylation of the Brg1 Chromatin Remodeling Enzyme Occurs during Mitosis.

Review 8. SATB1-mediated chromatin landscape in T cells.

9. Tight DNA-protein complexes isolated from barley seedlings are rich in potential guanine quadruplex sequences.

10. The Long Linker Region of Telomere-Binding Protein TRF2 Is Responsible for Interactions with Lamins.