Literature DB >> 3774556

Replication origins are attached to the nuclear skeleton.

S V Razin, M G Kekelidze, E M Lukanidin, K Scherrer, G P Georgiev.   

Abstract

DNA fragments containing replication origins (oriDNA) were isolated from a chicken erythroblast cell line by a modified procedure of Zannis-Hadjopoulos et al. and studied in the renaturation reaction driven by either total or nuclear matrix DNA (nmDNA) from the same cells or from mature erythrocytes. We found that the unique sequences of nmDNA from erythroblasts (5 kb long) represented a specific subset of sequences constituting about a quarter of total DNA unique sequences, while the erythrocyte nmDNA 5 kb fragments constitute only about one tenth of total unique DNA and all are recovered among erythroblast nmDNA. Virtually all oriDNA sequences are present in the fraction of erythrocyte nmDNA. Thereafter, the putative positions of replication origins within the alpha-globine gene domain have been mapped by hybridization experiments. They were found to coincide with the previously established positions of permanent sites of DNA attachment to the nuclear matrix.

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Year:  1986        PMID: 3774556      PMCID: PMC311844          DOI: 10.1093/nar/14.20.8189

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  20 in total

1.  [Localization of regions of DNA attachment to the nuclear skeleton within chicken alpha-globin genes in functionally active and functionally inactive nuclei].

Authors:  S V Razin; J Rzeszowska-Wolny; J Moreau; K Scherrer
Journal:  Mol Biol (Mosk)       Date:  1985 Mar-Apr

2.  The association of transcribed genes with the nuclear matrix of Drosophila cells during heat shock.

Authors:  D Small; B Nelkin; B Vogelstein
Journal:  Nucleic Acids Res       Date:  1985-04-11       Impact factor: 16.971

3.  Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold.

Authors:  J Mirkovitch; M E Mirault; U K Laemmli
Journal:  Cell       Date:  1984-11       Impact factor: 41.582

4.  The spatial organization of sequences involved in initiation and termination of eukaryotic DNA replication.

Authors:  P R Cook; J Lang
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

5.  Attachment of origins of replication to the nuclear matrix and the chromosomal scaffold.

Authors:  H M van der Velden; G van Willigen; R H Wetzels; F Wanka
Journal:  FEBS Lett       Date:  1984-06-04       Impact factor: 4.124

6.  Effects of psoralen on replicon size and mean rate of DNA synthesis in partially synchronized cells of Pisum sativum L.

Authors:  D Francis; N D Davies; J A Bryant; S G Hughes; D R Sibson; P N Fitchett
Journal:  Exp Cell Res       Date:  1985-06       Impact factor: 3.905

7.  Identification of a nuclear protein matrix.

Authors:  R Berezney; D S Coffey
Journal:  Biochem Biophys Res Commun       Date:  1974-10-23       Impact factor: 3.575

8.  The similarity of DNA sequences remaining bound to scaffold upon nuclease treatment of interphase nuclei and metaphase chromosomes.

Authors:  S V Razin; V L Mantieva; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

9.  Lesions induced in DNA by ultraviolet light are repaired at the nuclear cage.

Authors:  S J McCready; P R Cook
Journal:  J Cell Sci       Date:  1984-08       Impact factor: 5.285

10.  Nuclear matrix. Isolation and characterization of a framework structure from rat liver nuclei.

Authors:  R Berezney; D S Coffey
Journal:  J Cell Biol       Date:  1977-06       Impact factor: 10.539

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  40 in total

1.  Gene positional changes relative to the nuclear substructure correlate with the proliferating status of hepatocytes during liver regeneration.

Authors:  Apolinar Maya-Mendoza; Rolando Hernández-Muñoz; Patricio Gariglio; Armando Aranda-Anzaldo
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

2.  Molecular structure and regulatory potential of a T-DNA integration site in petunia.

Authors:  Antje Dietz-Pfeilstetter; Nicola Arndt; Volker Kay; Jürgen Bode
Journal:  Transgenic Res       Date:  2003-02       Impact factor: 2.788

3.  Organization of specific DNA sequence elements in the region of the replication origin and matrix attachment site in the chicken alpha-globin gene domain.

Authors:  W A Krajewski; S V Razin
Journal:  Mol Gen Genet       Date:  1992-11

4.  Direct repeats at nuclear matrix-associated DNA regions and their putative control function in the replicating eukaryotic genome.

Authors:  R J Opstelten; J M Clement; F Wanka
Journal:  Chromosoma       Date:  1989-12       Impact factor: 4.316

5.  Transcription of the alpha globin gene domain in normal and AEV-transformed chicken erythroblasts: mapping of giant globin-specific RNA including embryonic and adult genes.

Authors:  F Broders; K Scherrer
Journal:  Mol Gen Genet       Date:  1987-09

6.  Characteristic of the silencer located in the CpG-rich region upstream of the cluster of chicken alpha-globin genes.

Authors:  D B Klochkov; E S Ioudinkova; S V Razin
Journal:  Dokl Biochem Biophys       Date:  2004 Sep-Oct       Impact factor: 0.788

7.  A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain.

Authors:  Denis Klochkov; Héctor Rincón-Arano; Elena S Ioudinkova; Viviana Valadez-Graham; Alexey Gavrilov; Félix Recillas-Targa; Sergey V Razin
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

8.  A scaffold-associated DNA region is located downstream of the pea plastocyanin gene.

Authors:  R E Slatter; P Dupree; J C Gray
Journal:  Plant Cell       Date:  1991-11       Impact factor: 11.277

9.  The chromatin structure of Saccharomyces cerevisiae autonomously replicating sequences changes during the cell division cycle.

Authors:  J A Brown; S G Holmes; M M Smith
Journal:  Mol Cell Biol       Date:  1991-10       Impact factor: 4.272

10.  The sequence-specific nuclear matrix binding factor F6 is a chicken GATA-like protein.

Authors:  Y S Vassetzky; C V De Moura Gallo; A N Bogdanova; S V Razin; K Scherrer
Journal:  Mol Gen Genet       Date:  1993-04
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