Literature DB >> 24639531

Extinct New Zealand megafauna were not in decline before human colonization.

Morten Erik Allentoft1, Rasmus Heller, Charlotte L Oskam, Eline D Lorenzen, Marie L Hale, M Thomas P Gilbert, Christopher Jacomb, Richard N Holdaway, Michael Bunce.   

Abstract

The extinction of New Zealand's moa (Aves: Dinornithiformes) followed the arrival of humans in the late 13th century and was the final event of the prehistoric Late Quaternary megafauna extinctions. Determining the state of the moa populations in the pre-extinction period is fundamental to understanding the causes of the event. We sampled 281 moa individuals and combined radiocarbon dating with ancient DNA analyses to help resolve the extinction debate and gain insights into moa biology. The samples, which were predominantly from the last 4,000 years preceding the extinction, represent four sympatric moa species excavated from five adjacent fossil deposits. We characterized the moa assemblage using mitochondrial DNA and nuclear microsatellite markers developed specifically for moa. Although genetic diversity differed significantly among the four species, we found that the millennia preceding the extinction were characterized by a remarkable degree of genetic stability in all species, with no loss of heterozygosity and no shifts in allele frequencies over time. The extinction event itself was too rapid to be manifested in the moa gene pools. Contradicting previous claims of a decline in moa before Polynesian settlement in New Zealand, our findings indicate that the populations were large and stable before suddenly disappearing. This interpretation is supported by approximate Bayesian computation analyses. Our analyses consolidate the disappearance of moa as the most rapid, human-facilitated megafauna extinction documented to date.

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Year:  2014        PMID: 24639531      PMCID: PMC3977255          DOI: 10.1073/pnas.1314972111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

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Authors:  J K Pritchard; M Stephens; P Donnelly
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2.  Rise and fall of the Beringian steppe bison.

Authors:  Beth Shapiro; Alexei J Drummond; Andrew Rambaut; Michael C Wilson; Paul E Matheus; Andrei V Sher; Oliver G Pybus; M Thomas P Gilbert; Ian Barnes; Jonas Binladen; Eske Willerslev; Anders J Hansen; Gennady F Baryshnikov; James A Burns; Sergei Davydov; Jonathan C Driver; Duane G Froese; C Richard Harington; Grant Keddie; Pavel Kosintsev; Michael L Kunz; Larry D Martin; Robert O Stephenson; John Storer; Richard Tedford; Sergei Zimov; Alan Cooper
Journal:  Science       Date:  2004-11-26       Impact factor: 47.728

3.  Cortical growth marks reveal extended juvenile development in New Zealand moa.

Authors:  Samuel T Turvey; Owen R Green; Richard N Holdaway
Journal:  Nature       Date:  2005-06-16       Impact factor: 49.962

4.  jModelTest: phylogenetic model averaging.

Authors:  David Posada
Journal:  Mol Biol Evol       Date:  2008-04-08       Impact factor: 16.240

5.  The evolutionary history of the extinct ratite moa and New Zealand Neogene paleogeography.

Authors:  M Bunce; T H Worthy; M J Phillips; R N Holdaway; E Willerslev; J Haile; B Shapiro; R P Scofield; A Drummond; P J J Kamp; A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-18       Impact factor: 11.205

6.  Microsatellite genotyping reveals end-Pleistocene decline in mammoth autosomal genetic variation.

Authors:  Veronica Nyström; Joanne Humphrey; Pontus Skoglund; Niall J McKeown; Sergey Vartanyan; Paul W Shaw; Kerstin Lidén; Mattias Jakobsson; Ian Barnes; Anders Angerbjörn; Adrian Lister; Love Dalén
Journal:  Mol Ecol       Date:  2012-03-23       Impact factor: 6.185

7.  Species-specific responses of Late Quaternary megafauna to climate and humans.

Authors:  Eline D Lorenzen; David Nogués-Bravo; Ludovic Orlando; Jaco Weinstock; Jonas Binladen; Katharine A Marske; Andrew Ugan; Michael K Borregaard; M Thomas P Gilbert; Rasmus Nielsen; Simon Y W Ho; Ted Goebel; Kelly E Graf; David Byers; Jesper T Stenderup; Morten Rasmussen; Paula F Campos; Jennifer A Leonard; Klaus-Peter Koepfli; Duane Froese; Grant Zazula; Thomas W Stafford; Kim Aaris-Sørensen; Persaram Batra; Alan M Haywood; Joy S Singarayer; Paul J Valdes; Gennady Boeskorov; James A Burns; Sergey P Davydov; James Haile; Dennis L Jenkins; Pavel Kosintsev; Tatyana Kuznetsova; Xulong Lai; Larry D Martin; H Gregory McDonald; Dick Mol; Morten Meldgaard; Kasper Munch; Elisabeth Stephan; Mikhail Sablin; Robert S Sommer; Taras Sipko; Eric Scott; Marc A Suchard; Alexei Tikhonov; Rane Willerslev; Robert K Wayne; Alan Cooper; Michael Hofreiter; Andrei Sher; Beth Shapiro; Carsten Rahbek; Eske Willerslev
Journal:  Nature       Date:  2011-11-02       Impact factor: 49.962

8.  Pleistocene to Holocene extinction dynamics in giant deer and woolly mammoth.

Authors:  A J Stuart; P A Kosintsev; T F G Higham; A M Lister
Journal:  Nature       Date:  2004-10-07       Impact factor: 49.962

9.  Profiling the dead: generating microsatellite data from fossil bones of extinct megafauna--protocols, problems, and prospects.

Authors:  Morten E Allentoft; Charlotte Oskam; Jayne Houston; Marie L Hale; M Thomas P Gilbert; Morten Rasmussen; Peter Spencer; Christopher Jacomb; Eske Willerslev; Richard N Holdaway; Michael Bunce
Journal:  PLoS One       Date:  2011-01-31       Impact factor: 3.240

10.  Using classical population genetics tools with heterochroneous data: time matters!

Authors:  Frantz Depaulis; Ludovic Orlando; Catherine Hänni
Journal:  PLoS One       Date:  2009-05-14       Impact factor: 3.240

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  15 in total

1.  Ancient DNA microsatellite analyses of the extinct New Zealand giant moa (Dinornis robustus) identify relatives within a single fossil site.

Authors:  M E Allentoft; R Heller; R N Holdaway; M Bunce
Journal:  Heredity (Edinb)       Date:  2015-06-03       Impact factor: 3.821

2.  Unique parasite aDNA in moa coprolites from New Zealand suggests mass parasite extinctions followed human-induced megafauna extinctions.

Authors:  Kevin D Lafferty; Skylar R Hopkins
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-13       Impact factor: 11.205

Review 3.  Human evolution: a tale from ancient genomes.

Authors:  Bastien Llamas; Eske Willerslev; Ludovic Orlando
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-02-05       Impact factor: 6.237

4.  Genetic evidence for post-glacial expansion from a southern refugium in the eastern moa (Emeus crassus).

Authors:  Alexander J F Verry; Kieren J Mitchell; Nicolas J Rawlence
Journal:  Biol Lett       Date:  2022-05-11       Impact factor: 3.812

5.  Moa diet fits the bill: virtual reconstruction incorporating mummified remains and prediction of biomechanical performance in avian giants.

Authors:  Marie R G Attard; Laura A B Wilson; Trevor H Worthy; Paul Scofield; Peter Johnston; William C H Parr; Stephen Wroe
Journal:  Proc Biol Sci       Date:  2016-01-13       Impact factor: 5.349

6.  Invader or resident? Ancient-DNA reveals rapid species turnover in New Zealand little penguins.

Authors:  Stefanie Grosser; Nicolas J Rawlence; Christian N K Anderson; Ian W G Smith; R Paul Scofield; Jonathan M Waters
Journal:  Proc Biol Sci       Date:  2016-02-10       Impact factor: 5.349

7.  The demography of extinction in eastern North American birds.

Authors:  Brian Tilston Smith; Marcelo Gehara; Michael G Harvey
Journal:  Proc Biol Sci       Date:  2021-02-03       Impact factor: 5.349

8.  Ancient DNA preserved in small bone fragments from the P.W. Lund collection.

Authors:  Frederik V Seersholm; Kasper Lykke Hansen; Matthew Heydenrych; Anders J Hansen; Michael Bunce; Morten E Allentoft
Journal:  Ecol Evol       Date:  2021-02-05       Impact factor: 2.912

9.  Ancient and contemporary DNA reveal a pre-human decline but no population bottleneck associated with recent human persecution in the kea (Nestor notabilis).

Authors:  Nicolas Dussex; Nicolas J Rawlence; Bruce C Robertson
Journal:  PLoS One       Date:  2015-02-26       Impact factor: 3.240

10.  Humans and climate change drove the Holocene decline of the brown bear.

Authors:  Jörg Albrecht; Kamil A Bartoń; Nuria Selva; Robert S Sommer; Jon E Swenson; Richard Bischof
Journal:  Sci Rep       Date:  2017-09-04       Impact factor: 4.379

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