Literature DB >> 15567864

Rise and fall of the Beringian steppe bison.

Beth Shapiro1, Alexei J Drummond, Andrew Rambaut, Michael C Wilson, Paul E Matheus, Andrei V Sher, Oliver G Pybus, M Thomas P Gilbert, Ian Barnes, Jonas Binladen, Eske Willerslev, Anders J Hansen, Gennady F Baryshnikov, James A Burns, Sergei Davydov, Jonathan C Driver, Duane G Froese, C Richard Harington, Grant Keddie, Pavel Kosintsev, Michael L Kunz, Larry D Martin, Robert O Stephenson, John Storer, Richard Tedford, Sergei Zimov, Alan Cooper.   

Abstract

The widespread extinctions of large mammals at the end of the Pleistocene epoch have often been attributed to the depredations of humans; here we present genetic evidence that questions this assumption. We used ancient DNA and Bayesian techniques to reconstruct a detailed genetic history of bison throughout the late Pleistocene and Holocene epochs. Our analyses depict a large diverse population living throughout Beringia until around 37,000 years before the present, when the population's genetic diversity began to decline dramatically. The timing of this decline correlates with environmental changes associated with the onset of the last glacial cycle, whereas archaeological evidence does not support the presence of large populations of humans in Eastern Beringia until more than 15,000 years later.

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Year:  2004        PMID: 15567864     DOI: 10.1126/science.1101074

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  159 in total

1.  Does history repeat itself? Wavelets and the phylodynamics of influenza A.

Authors:  Jennifer A Tom; Janet S Sinsheimer; Marc A Suchard
Journal:  Mol Biol Evol       Date:  2011-12-08       Impact factor: 16.240

2.  Evaluating the impact of post-mortem damage in ancient DNA: a theoretical approach.

Authors:  Martyna Molak; Simon Y W Ho
Journal:  J Mol Evol       Date:  2011-11-20       Impact factor: 2.395

3.  A Bayesian phylogenetic method to estimate unknown sequence ages.

Authors:  Beth Shapiro; Simon Y W Ho; Alexei J Drummond; Marc A Suchard; Oliver G Pybus; Andrew Rambaut
Journal:  Mol Biol Evol       Date:  2010-10-01       Impact factor: 16.240

4.  Life and extinction of megafauna in the ice-age Arctic.

Authors:  Daniel H Mann; Pamela Groves; Richard E Reanier; Benjamin V Gaglioti; Michael L Kunz; Beth Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

5.  Using ancient DNA and coalescent-based methods to infer extinction.

Authors:  Dan Chang; Beth Shapiro
Journal:  Biol Lett       Date:  2016-02       Impact factor: 3.703

6.  Pre-whaling genetic diversity and population ecology in eastern Pacific gray whales: insights from ancient DNA and stable isotopes.

Authors:  S Elizabeth Alter; Seth D Newsome; Stephen R Palumbi
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

7.  Evaluating bacterial pathogen DNA preservation in museum osteological collections.

Authors:  Ian Barnes; Mark G Thomas
Journal:  Proc Biol Sci       Date:  2006-03-22       Impact factor: 5.349

8.  Ancient DNA reveals Holocene loss of genetic diversity in a South American rodent.

Authors:  Yvonne L Chan; Eileen A Lacey; Oliver P Pearson; Elizabeth A Hadly
Journal:  Biol Lett       Date:  2005-12-22       Impact factor: 3.703

9.  Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA.

Authors:  M Stiller; R E Green; M Ronan; J F Simons; L Du; W He; M Egholm; J M Rothberg; S G Keates; S G Keats; N D Ovodov; E E Antipina; G F Baryshnikov; Y V Kuzmin; A A Vasilevski; G E Wuenschell; J Termini; M Hofreiter; V Jaenicke-Després; S Pääbo
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-25       Impact factor: 11.205

Review 10.  Ancient population genomics and the study of evolution.

Authors:  M Parks; S Subramanian; C Baroni; M C Salvatore; G Zhang; C D Millar; D M Lambert
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

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