| Literature DB >> 24637774 |
Masaya Sato1, Mayuko Kondo1, Ryosuke Tateishi1, Naoto Fujiwara1, Naoya Kato2, Haruhiko Yoshida1, Masataka Taguri3, Kazuhiko Koike1.
Abstract
BACKGROUND & AIMS: IL28B polymorphisms were shown to be strongly associated with the response to interferon therapy in chronic hepatitis C (CHC) and spontaneous viral clearance. However, little is known about how these polymorphisms affect the natural course of the disease. Thus, we conducted the present meta-analysis to assess the impact of IL28B polymorphisms on disease progression.Entities:
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Year: 2014 PMID: 24637774 PMCID: PMC3956722 DOI: 10.1371/journal.pone.0091822
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Literature search and study selection process.
Twenty-eight individual studies that met all of the inclusion and exclusion criteria.
Main characteristics of all studies included in the meta-analysis.
| First author (year) | Ref. | Population ethnicity, region | IL-28B SNP rsID, Allele | Outcome measure F(Fibrosis) A(Activity) S(Steatosis) | Patients | HCV genotype | Genotype for patients rs12979860 | Genotype for patients rs8099917 | ||||
| Male | Female | Total | CC | CT/TT | TT | TG/GG | ||||||
| Abe (2010) |
| Asian, Japan | rs8099917 T/G | F, A: Inuyama | 212 | 152 | 364 | 1/2 | 265 | 99 | ||
| Honda (2010) |
| Asian, Japan | rs8099917 T/G | F, A: Inuyama | 58 | 33 | 91 | 1 | 60 | 31 | ||
| Lotrich (2010) |
| Mixed (African-American/Caucasian), USA | rs12979860 C/T | F: Ishak | 101 | 32 | 133 | 1/2 | 57 | 76 | ||
| Monte (2010) |
| Caucasian, Spain | rs12979860 C/T | F: Scheuer | 166 | 117 | 283 | 1–4 | 129 | 154 | ||
| Thompson (2010) |
| Mixed (African-American/Caucasian/Asian/Hispanic), USA | rs12979860 C/T | F: METAVIR | 986 | 642 | 1628 | 1 | 538 | 1090 | ||
| Bochud (2011) |
| Caucasian, Switzerland | rs12979860 C/T rs8099917 T/G | F: Ishak, A: ALT S: Histological finding | 163 | 79 | 242 | 1–3 | 90 | 150 | 150 | 92 |
| Dill MT (2011) |
| Caucasian, Switzerland | rs12979860 C/T rs8099917 T/G | F, A: METAVIR | 30 | 79 | 109 | 1–4 | 33 | 96 | 52 | 57 |
| Fabris (2011) |
| Caucasian, Italy | rs12979860 C/T | F: Ishak | N.A | N.A | 434 | 1–4 | 133 | 301 | ||
| Falleti (2011) |
| Caucasian, Italy | rs12979860 C/T | F: Ishak | 357 | 272 | 629 | 1–4 | 205 | 424 | ||
| Kurosaki (2011) |
| Asian, Japan | rs8099917 T/G | F: METAVIR S: Histological finding | 250 | 246 | 496 | 1 | 269 | 106 | ||
| Lagging (2011) |
| Caucasian, Sweden | rs12979860 C/T rs8099917 T/G | F: Ishak S: Histological finding | 169 | 83 | 252 | 1–4 | 93 | 159 | 153 | 99 |
| Lin (2011) |
| Asian, Taiwan | rs12979860 C/T rs8099917 T/G | F: METAVIR | 123 | 68 | 191 | 1 | 171 | 20 | 170 | 21 |
| Lindh (2011)-1 |
| Mixed (Caucasian/Asian), Sweden | rs12979860 C/T rs8099917 T/G | F: Batts Ludwig | 67 | 43 | 110 | 1 | 38 | 72 | 66 | 44 |
| Lindh (2011)-2 |
| Caucasian, Sweden | rs12979860 C/T | F: Ishak | 204 | 137 | 341 | 2/3 | 150 | 191 | ||
| Marabita (2011) |
| Caucasian, Italy | rs12979860 C/T rs8099917 T/G | F: Ishak | 129 | 118 | 247 | 1–4 | 88 | 159 | 131 | 116 |
| Miyamura (2011) |
| Asian, Japan | rs8099917 T/G | F, A: Inuyama | 37 | 42 | 79 | 1 | 53 | 26 | ||
| Moghaddam(2011) |
| Caucasian, Norway | rs12979860 C/T rs8099917 T/G | F: APRI score | 166 | 115 | 281 | 3 | 129 | 152 | 201 | 80 |
| Rueda (2011) |
| Caucasian, Spain | rs12979860 C/T | F, A: Scheuer | 246 | 177 | 423 | 1–4 | 83 | 184 | ||
| Tillman (2011) |
| Mixed (African-American/Caucasian/Asian), USA | rs12979860 C/T rs8099917 T/G | S: Histological finding | 215 | 110 | 325 | 1 | 88 | 237 | 97 | 67 |
| Yu (2011) |
| Asian, Taiwan | rs8099917 T/G | F: Knodell and Scheuer | 264 | 218 | 482 | 2 | 315 | 34 | ||
| Asahina (2011) |
| Asian, Japan | rs12979860 C/T rs8099917 T/G | F: Inuyama | 28 | 60 | 88 | 1 | 54 | 34 | 54 | 34 |
| Bochud (2012) |
| Caucasian, Switzerland | rs12979860 C/T rs8099917 T/G | F, A: METAVIR | 870 | 657 | 1527 | 1–4 | 534 | 993 | 855 | 672 |
| Mach (2012) |
| Slav: Poland | rs12979860 C/T | F: Batts Ludwig | 82 | 60 | 142 | 1 | 38 | 104 | ||
| Miyashita (2012) |
| Asian, Japan | rs8099917 T/G | F, A: Desmet | 88 | 132 | 220 | 1/2 | 155 | 63 | ||
| Ohnishi (2012) |
| Asian, Japan | rs8099917 T/G | S: Histological finding | 83 | 70 | 153 | 1 | 116 | 37 | ||
| Rembeck (2012) |
| Caucasian, Sweden | rs12979860 C/T | F: Ishak | 199 | 140 | 339 | 2/3 | 144 | 179 | ||
| Tolmane (2012) |
| Caucasian, Latvia | rs12979860 C/T | F: Knodell histology activity index S: Histological finding | 84 | 58 | 142 | 1–3 | 41 | 80 | ||
| Toyoda (2012) |
| Asian, Japan | rs8099917 T/G | F, A: METAVIR | 139 | 133 | 272 | 1 | 187 | 59 | ||
*Patients included in the original study.
Thus, patients without information regarding IL28B polymorphism were also included.
APRI, aminotransferase platelet ratio index.
Figure 2Forest plot of the IL28B genotypes and the risk of severe fibrosis.
(a) rs12979860 in all patients, (b) rs8099917 in all patients, (c) rs12979860 in treatment-naïve patients, and (d) rs8099917 in treatment-naïve patients.
Figure 3Forest plot of the IL28B genotypes and the risk of severe inflammation activity.
(a) rs12979860 and (b) rs8099917. (c) rs12979860 in treatment-naïve patients, and (d) rs8099917 in treatment-naïve patients.
Meta-regression analysis between each continuous variable among the studies (only treatment- naïve patients were included) and the effect (log odds ratio) of IL28B polymorphisms on inflammation activity.
| Variables | Slope | Standard error | P-value |
| Proportion of patients with genotype 1 or 4 virus, per 1% increase | |||
| rs12979860 | 2.992 | 1.497 | 0.046 |
| Proportion of male patients, per 1% increase | |||
| rs12979860 | −2.963 | 5.802 | 0.610 |
| Proportion of Caucasian patients, per 1% increase | |||
| rs12979860 | − | − | − |
| Proportion of African-American patients, per 1% increase | |||
| rs12979860 | − | − | − |
| Proportion of Asian patients, per 1% increase | |||
| rs12979860 | − | − | − |
*Positive (negative) slope values indicate that the proportions of patients with the rs12979860 CC genotype with severe inflammation activity are increasing (decreasing) as the values of each contentious variable (proportions of genotype 1 or 4 virus, male, or each race) is increasing.
We could not perform meta-regression analyses for these outcomes because only caucasian patients were included in all 3 studies included in this analysis.
Figure 4Forest plot of the IL28B genotypes and the risk of hepatic steatosis.
(a) rs12979860 and (b) rs8099917. (c) rs12979860 in treatment-naïve patients, and (d) rs8099917 in treatment-naïve patients.
Meta-regression analysis between each continuous variable among the studies and the effect (log odds ratio) of IL28B polymorphisms on steatosis.
| Variables | Slope | Standard error | P-value |
| Proportion of patients with genotype 1 or 4 virus, per 1% increase | |||
| rs12979860 | −4.947 | 1.086 | <0.001 |
| rs8099917 | −2.704 | 1.277 | 0.034 |
| Proportion of male patients, per 1% increase | |||
| rs12979860 | −2.899 | 16.577 | 0.861 |
| rs8099917 | 6.225 | 2.530 | 0.014 |
| Proportion of Caucasian patients, per 1% increase | |||
| rs12979860 | 7.361 | 1.569 | <0.001 |
| rs8099917 | 1.168 | 0.422 | 0.006 |
| Proportion of African-American patients, per 1% increase | |||
| rs12979860 | −8.996 | 1.918 | <0.001 |
| rs8099917 | 0.142 | 2.147 | 0.947 |
| Proportion of Asian patients, per 1% increase | |||
| rs12979860 | − | − | − |
| rs8099917 | −1.049 | 0.398 | 0.008 |
*Positive (negative) slope values indicate that the proportions of patients with the rs12979860 CC or rs8099917 TT genotypes with severe steatosis are increasing (decreasing) as the values of each contentious variable (proportions of genotype 1 or 4 virus, male, or each race) is increasing.
We could not perform a meta-regression analysis for this outcome because only one patient was included in the corresponding studies.
Figure 5Meta-regression plot for log odds ratios in rates of patients with severe hepatic steatosis by proportion of males (%) in rs8099917.