| Literature DB >> 24637620 |
Marie Austdal1, Ragnhild Bergene Skråstad2, Astrid Solberg Gundersen3, Rigmor Austgulen4, Ann-Charlotte Iversen4, Tone Frost Bathen5.
Abstract
OBJECTIVE: To explore the potential of magnetic resonance (MR) metabolomics for study of preeclampsia, for improved phenotyping and elucidating potential clues to etiology and pathogenesis.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24637620 PMCID: PMC3956817 DOI: 10.1371/journal.pone.0091923
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Serum metabolite concentrations.
| Metabolite (μM) | PE | PC | NP | p-value |
| Histidine | 90±26 | 72±21 | 57±12 | 0.036 |
| Formate | 19±4 | 25±4 | 22±2 | 0.059 |
| Glycerol | 146±37 | 105±34 | 92±29 | 0.059 |
| Alanine | 251±39 | 303±82 | 223±31 | 0.059 |
| Lactate | 907±306 | 1094±252 | 774±179 | 0.094 |
| Creatine | 42±14 | 30±7 | 35±7 | >0.05 |
| Glucose | 2455±623 | 3005±656 | 2922±466 | >0.05 |
| Glycine | 135±31 | 142±20 | 176±52 | >0.05 |
| Valine | 132±26 | 155±31 | 161±26 | >0.05 |
| Acetate | 22±4 | 26±9 | 32±16 | >0.05 |
| Citrate | 81±18 | 70±19 | 63±13 | >0.05 |
| Phenylalanine | 38±7 | 37±10 | 34±4 | >0.05 |
| Glutamine | 366±95 | 375±81 | 410±60 | >0.05 |
| 3-Hydroxybutyrate | 80±58 | 47±13 | 51±34 | >0.05 |
| Tyrosine | 34±8 | 39±8 | 39±10 | >0.05 |
| Glutamate | 94±28 | 106±35 | 95±37 | >0.05 |
| Creatinine | 54±6 | 50±7 | 53±7 | >0.05 |
| Leucine | 116±18 | 114±28 | 109±25 | >0.05 |
| 2-Methylglutarate | 11±3 | 12±2 | 11±4 | >0.05 |
Values given as mean±SD. PE: Women with preeclampsia. PC: Pregnant controls. NP: Non-pregnant controls.
*Significantly different metabolite concentration between PE and PC with a cutoff value at p = 0.05 after Benjamini-Hochberg correction using the Kruskal-Wallis test for nonparametric distributions of concentrations for three independent groups.
Significantly different metabolite concentration between PC and NP.
Characteristics of study participants.
| Data | PE | PC | NP | p-value |
| n (samples) | 10 | 10 | 10 | - |
| Age (years) | 29.5 (22–39) | 32.6 (28–39) | 30.7 (24–39) | >0.05 |
| GA at sampling (week) | 35.9 (21.7–37.9) | 35.2 (18.6–37.4) | N/A | >0.05 |
| GA at onset (week) | 33.2 (21.4–36.9) | N/A | N/A | - |
| BP sys. (mmHg) | 163 (143–174) | 120(100–191) | N/A | 0.000 |
| BP dia. (mmHg) | 104 (96–111) | 78 (60–96) | N/A | 0.000 |
| Proteinuria | 3 (1–4) | 0.1 (0–1) | N/A | 0.000 |
Values are given as median (min-max). PE: Women with preeclampsia. PC: Pregnant controls. NP: Non-pregnant controls. GA: Gestational age. BP: Blood pressure. Dia: Diastolic. Sys: Systolic. N/A: Not applicable. Statistical p-values computed by Kruskal-Wallis independent samples test.
Proteinuria measured with dipstick.
Figure 1Results from urine analysis.
Results from Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA) of urine samples from women with preeclampsia (PE, pregnant controls (PC) and non-pregnant controls (NP). A) Typical high resolution NMR spectrum of urine from a PE subject, most abundant metabolites annotated. B) PCA score plot separating all three groups in two dimensions. C) Loading Variables (LV) 1 and 2 of the PLS-DA used to create a model discriminating between PE and PC groups. Arrow direction indicates increased metabolite level. D) Scores on LV1 and LV2 showing a clustering of early onset PE samples (marked by arrows). TMAO: Trimethylamine-N-Oxide.
Urine metabolite concentrations.
| Metabolite (μM/mM creatinine) | PE | PC | NP | p-value |
| Glycine | 260±150 | 498±219 | 138±79 | 0.000 |
| p-Cresol Sulfate | 6.2±4,3 | 39±13 | 30±10 | 0.000 |
| Alanine | 67±57 | 86±51 | 21±5 | 0.000 |
| Threonine | 84±102 | 94±48 | 20±5 | 0.000 |
| Choline | 41±50 | 10±4 | 5.3±2.7 | 0.004 |
| Hippurate | 88±61 | 265±144 | 280±188 | 0.004 |
| Histidine | 153±129 | 266±100 | 79±42 | 0.004 |
| Asparagine | 31±42 | 47±24 | 13±7 | 0.004 |
| Isobutyrate | 21±8 | 13±7 | 6±7 | 0.004 |
| Lactate | 36±27 | 73±137 | 9.6±4.4 | 0.004 |
| Citrate | 203±107 | 473±136 | 371±217 | 0.004 |
| Leucine | 9.4±4.8 | 8.0±1.6 | 5.0±1.3 | 0.010 |
| Dimethylamine | 66±13 | 41±7 | 40±18 | 0.015 |
| Trigonelline | 6.3±4.9 | 16±15 | 29±22 | 0.015 |
| 2-Oxoglutarate | 36±23 | 40±9 | 13±10 | 0.016 |
| Ethanolamine | 75±24 | 66±19 | 44±12 | 0.018 |
| Isoleucine | 6.3±3.8 | 5.2±1.2 | 3.1±1.1 | 0.018 |
| cis-Aconitate | 37±15 | 39±12 | 25±5 | 0.018 |
| Creatine | 131±118 | 76±138 | 23±25 | 0.041 |
| Glutamine | 114±88 | 121±37 | 70±20 | 0.041 |
| Glucose | 38±71 | 75±44 | 35± 15 | 0.049 |
| Valine | 7.6±6.7 | 6.1±2.0 | 3.8±1.4 | >0.05 |
| Tyrosine | 28±19 | 23±12 | 14±6 | >0.05 |
| N-N-Dimethylglycine | 6.0±4.0 | 5.3±3.0 | 3.3±1.7 | >0.05 |
| Malonate | 58±49 | 156±187 | 72±105 | >0.05 |
| Uracil | 8.0±3.8 | 10.2±2.8 | 7.1±3.2 | >0.05 |
| N-Phenylacetylglycine | 41±29 | 71±35 | 57±24 | >0.05 |
| Betaine | 12±8 | 15±13 | 8.0±5.2 | >0.05 |
| 2-Methylglutarate | 11±7 | 16±9 | 6.9±3.2 | >0.05 |
| Guanidoacetate | 70±77 | 77±41 | 63±39 | >0.05 |
| Formate | 23±12 | 35±18 | 23±13 | >0.05 |
| 3-Hydroxybutyrate | 9.3±7.9 | 16±15 | 16±25 | >0.05 |
| Acetate | 8.5±5.8 | 11±5 | 12±9 | >0.05 |
| Urea | 2957±1211 | 2251±1077 | 2795±1845 | >0.05 |
| 2-Hydroxybutyrate | 8.0±3.5 | 7.4±1.2 | 5.9±1.3 | >0.05 |
| Pyruvate | 7.8±4.9 | 15±15 | 6.3±2.1 | >0.05 |
| TMAO | 67±58 | 54±54 | 66±78 | >0.05 |
| Creatinine | 30 ±38 | 21±13 | 26±14 | >0.05 |
| o-Acetylcholine | 2.1±3.1 | 1.7±2.1 | 1.4±0.8 | >0.05 |
| π-Methylhistidine | 46±55 | 48±67 | 50±56 | >0.05 |
| Phenylalanine | 17±13 | 15±8 | 14±5 | >0.05 |
Values given as mean [metabolite/creatinine]±sample standard deviation. PE: Women with preeclampsia. PC: Pregnant controls. NP: Non-pregnant controls. TMAO: Trimethylamine-N-Oxide.
As suggested by Chenomx, may instead be phenylacetylglutamine.
Absolute creatinine concentration – not corrected for dilution.
*Significantly different metabolite concentration between PE and PC with a cutoff value at p = 0.05 after Benjamini-Hochberg correction using the Kruskal-Wallis test for nonparametric distributions of concentrations for three independent groups.
Significantly different metabolite concentration between PC and NP.
Figure 2Results from serum analysis.
Results from Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA) on the spectra of serum samples from women with preeclampsia (PE), pregnant controls (PC) and non-pregnant controls (NP). ppm: parts per million, resonance frequency of metabolite. A) Typical highly resolved serum CPMG (lipids suppressed) and LEDBPG (small metabolites suppressed) spectra from a woman with PE with some annotated metabolites. B) Scores plot and loading profile of the PCA separating CPMG spectra of the three groups. C) Scores plot and Loading Variable (LV) 1 from the PLS-DA of CPMG spectra showing class discrimination based on lipid level, where women with PE clearly have higher levels of total lipids in the serum compared to pregnant controls D) Score plot and LV1 of the LEDBPG showing distinction between PE and PC groups based on lipoprotein distribution. LV1 shows higher levels of VLDL-LDL and lower levels of HDL. VLDL: very low density lipoproteins. LDL: low density lipoproteins. HDL: high density lipoproteins.
PLS-DA Classification of samples as healthy pregnant or from women with preeclampsia.
| Input | LVs | Classification accuracy | Sensitivity | Specificity | AUC | p |
| Urine spectra | 2 | 95% | 0.9 | 1 | 0.90 | 0.001 |
| Serum CPMG spectra | 4 | 90% | 0.8 | 1 | 0.86 | 0.002 |
| Serum LEDBPG spectra | 4 | 90% | 1 | 0.8 | 0.70 | 0.001 |
The sensitivity is for detecting a preeclampsia sample using Partial Least Squares Discriminant Analysis. Classification accuracy, sensitivity and specificity are from the leave-one-out cross validation. The p-value is from permutation testing the model with 1000 repeats. LVs: number of loading variables in model. AUC: Area under the Receiver Operator Characteristic curve. CPMG: Lipid-suppressed. LEDBPG: Low molecular weight metabolite suppressed.