Literature DB >> 24616508

Testing Turing's theory of morphogenesis in chemical cells.

Nathan Tompkins1, Ning Li, Camille Girabawe, Michael Heymann, G Bard Ermentrout, Irving R Epstein, Seth Fraden.   

Abstract

Alan Turing, in "The Chemical Basis of Morphogenesis" [Turing AM (1952) Philos Trans R Soc Lond 237(641):37-72], described how, in circular arrays of identical biological cells, diffusion can interact with chemical reactions to generate up to six periodic spatiotemporal chemical structures. Turing proposed that one of these structures, a stationary pattern with a chemically determined wavelength, is responsible for differentiation. We quantitatively test Turing's ideas in a cellular chemical system consisting of an emulsion of aqueous droplets containing the Belousov-Zhabotinsky oscillatory chemical reactants, dispersed in oil, and demonstrate that reaction-diffusion processes lead to chemical differentiation, which drives physical morphogenesis in chemical cells. We observe five of the six structures predicted by Turing. In 2D hexagonal arrays, a seventh structure emerges, incompatible with Turing's original model, which we explain by modifying the theory to include heterogeneity.

Keywords:  chemical dynamics; chemical oscillations; nonlinear dynamics; pattern formation

Year:  2014        PMID: 24616508      PMCID: PMC3970514          DOI: 10.1073/pnas.1322005111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

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Journal:  Phys Rev Lett       Date:  2001-11-07       Impact factor: 9.161

2.  Excitatory and inhibitory coupling in a one-dimensional array of Belousov-Zhabotinsky micro-oscillators: theory.

Authors:  Vladimir K Vanag; Irving R Epstein
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-12-27

Review 3.  Computational approaches to developmental patterning.

Authors:  Luis G Morelli; Koichiro Uriu; Saúl Ares; Andrew C Oates
Journal:  Science       Date:  2012-04-13       Impact factor: 47.728

4.  Experimental evidence of a sustained standing Turing-type nonequilibrium chemical pattern.

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Journal:  Phys Rev Lett       Date:  1990-06-11       Impact factor: 9.161

5.  Concentration wave propagation in two-dimensional liquid-phase self-oscillating system.

Authors:  A N Zaikin; A M Zhabotinsky
Journal:  Nature       Date:  1970-02-07       Impact factor: 49.962

6.  Complex patterns in reactive microemulsions: self-organized nanostructures?

Authors:  Irving R Epstein; Vladimir K Vanag
Journal:  Chaos       Date:  2005-12       Impact factor: 3.642

Review 7.  Self-organization in cell biology: a brief history.

Authors:  Eric Karsenti
Journal:  Nat Rev Mol Cell Biol       Date:  2008-03       Impact factor: 94.444

8.  Biocompatible surfactants for water-in-fluorocarbon emulsions.

Authors:  C Holtze; A C Rowat; J J Agresti; J B Hutchison; F E Angilè; C H J Schmitz; S Köster; H Duan; K J Humphry; R A Scanga; J S Johnson; D Pisignano; D A Weitz
Journal:  Lab Chip       Date:  2008-09-02       Impact factor: 6.799

9.  An experimental design method leading to chemical Turing patterns.

Authors:  Judit Horváth; István Szalai; Patrick De Kepper
Journal:  Science       Date:  2009-05-08       Impact factor: 47.728

10.  Developmental biology. The Turing model comes of molecular age.

Authors:  Philip K Maini; Ruth E Baker; Cheng-Ming Chuong
Journal:  Science       Date:  2006-12-01       Impact factor: 63.714

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  32 in total

1.  Configurable NOR gate arrays from Belousov-Zhabotinsky micro-droplets.

Authors:  A L Wang; J M Gold; N Tompkins; M Heymann; K I Harrington; S Fraden
Journal:  Eur Phys J Spec Top       Date:  2016-02-29       Impact factor: 2.707

2.  Creation and perturbation of planar networks of chemical oscillators.

Authors:  Nathan Tompkins; Matthew Carl Cambria; Adam L Wang; Michael Heymann; Seth Fraden
Journal:  Chaos       Date:  2015-06       Impact factor: 3.642

Review 3.  The Cognitive Lens: a primer on conceptual tools for analysing information processing in developmental and regenerative morphogenesis.

Authors:  Santosh Manicka; Michael Levin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-06-10       Impact factor: 6.237

4.  Wavenumber selection in coupled transport equations.

Authors:  Arnd Scheel; Angela Stevens
Journal:  J Math Biol       Date:  2017-02-21       Impact factor: 2.259

Review 5.  Reaction-diffusion processes at the nano- and microscales.

Authors:  Irving R Epstein; Bing Xu
Journal:  Nat Nanotechnol       Date:  2016-04       Impact factor: 39.213

6.  Hanging droplets from liquid surfaces.

Authors:  Ganhua Xie; Joe Forth; Shipei Zhu; Brett A Helms; Paul D Ashby; Ho Cheung Shum; Thomas P Russell
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-27       Impact factor: 11.205

7.  Synthesis and materialization of a reaction-diffusion French flag pattern.

Authors:  Anton S Zadorin; Yannick Rondelez; Guillaume Gines; Vadim Dilhas; Georg Urtel; Adrian Zambrano; Jean-Christophe Galas; André Estevez-Torres
Journal:  Nat Chem       Date:  2017-05-01       Impact factor: 24.427

8.  The grasshopper problem.

Authors:  Olga Goulko; Adrian Kent
Journal:  Proc Math Phys Eng Sci       Date:  2017-11-22       Impact factor: 2.704

9.  Collective Growth in a Small Cell Network.

Authors:  Jasmin Imran Alsous; Paul Villoutreix; Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2017-08-31       Impact factor: 10.834

10.  Redox Is a Global Biodevice Information Processing Modality.

Authors:  Eunkyoung Kim; Jinyang Li; Mijeong Kang; Deanna L Kelly; Shuo Chen; Alessandra Napolitano; Lucia Panzella; Xiaowen Shi; Kun Yan; Si Wu; Jana Shen; William E Bentley; Gregory F Payne
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2019-04-29       Impact factor: 10.961

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