Literature DB >> 22499940

Computational approaches to developmental patterning.

Luis G Morelli1, Koichiro Uriu, Saúl Ares, Andrew C Oates.   

Abstract

Computational approaches are breaking new ground in understanding how embryos form. Here, we discuss recent studies that couple precise measurements in the embryo with appropriately matched modeling and computational methods to investigate classic embryonic patterning strategies. We include signaling gradients, activator-inhibitor systems, and coupled oscillators, as well as emerging paradigms such as tissue deformation. Parallel progress in theory and experiment will play an increasingly central role in deciphering developmental patterning.

Mesh:

Year:  2012        PMID: 22499940     DOI: 10.1126/science.1215478

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  31 in total

Review 1.  Applying evolutionary genetics to developmental toxicology and risk assessment.

Authors:  Maxwell C K Leung; Andrew C Procter; Jared V Goldstone; Jonathan Foox; Robert DeSalle; Carolyn J Mattingly; Mark E Siddall; Alicia R Timme-Laragy
Journal:  Reprod Toxicol       Date:  2017-03-04       Impact factor: 3.143

Review 2.  From morphogen to morphogenesis and back.

Authors:  Darren Gilmour; Martina Rembold; Maria Leptin
Journal:  Nature       Date:  2017-01-18       Impact factor: 49.962

3.  Data-driven modeling reveals cell behaviors controlling self-organization during Myxococcus xanthus development.

Authors:  Christopher R Cotter; Heinz-Bernd Schüttler; Oleg A Igoshin; Lawrence J Shimkets
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-22       Impact factor: 11.205

Review 4.  Wnt signaling in skin development, homeostasis, and disease.

Authors:  Xinhong Lim; Roel Nusse
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-02-01       Impact factor: 10.005

5.  Testing Turing's theory of morphogenesis in chemical cells.

Authors:  Nathan Tompkins; Ning Li; Camille Girabawe; Michael Heymann; G Bard Ermentrout; Irving R Epstein; Seth Fraden
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-10       Impact factor: 11.205

6.  The role of self-organization in developmental evolution.

Authors:  Joseph E Hannon Bozorgmehr
Journal:  Theory Biosci       Date:  2014-04-16       Impact factor: 1.919

Review 7.  Extracellular matrix motion and early morphogenesis.

Authors:  Rajprasad Loganathan; Brenda J Rongish; Christopher M Smith; Michael B Filla; Andras Czirok; Bertrand Bénazéraf; Charles D Little
Journal:  Development       Date:  2016-06-15       Impact factor: 6.868

8.  The ecological basis of morphogenesis: branching patterns in swarming colonies of bacteria.

Authors:  Pan Deng; Laura de Vargas Roditi; Dave van Ditmarsch; Joao B Xavier
Journal:  New J Phys       Date:  2014-01       Impact factor: 3.729

9.  Spatiotemporal control of cell cycle acceleration during axolotl spinal cord regeneration.

Authors:  Emanuel Cura Costa; Leo Otsuki; Aida Rodrigo Albors; Elly M Tanaka; Osvaldo Chara
Journal:  Elife       Date:  2021-05-14       Impact factor: 8.140

10.  A model of filiform hair distribution on the cricket cercus.

Authors:  Jeffrey J Heys; Prathish K Rajaraman; Tomas Gedeon; John P Miller
Journal:  PLoS One       Date:  2012-10-04       Impact factor: 3.240

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