Literature DB >> 24613019

Ultra-high-throughput screening method for the directed evolution of glucose oxidase.

Raluca Ostafe1, Radivoje Prodanovic2, Jovana Nazor3, Rainer Fischer4.   

Abstract

Glucose oxidase (GOx) is used in many industrial processes that could benefit from improved versions of the enzyme. Some improvements like higher activity under physiological conditions and thermal stability could be useful for GOx applications in biosensors and biofuel cells. Directed evolution is one of the currently available methods to engineer improved GOx variants. Here, we describe an ultra-high-throughput screening system for sorting the best enzyme variants generated by directed evolution that incorporates several methodological refinements: flow cytometry, in vitro compartmentalization, yeast surface display, fluorescent labeling of the expressed enzyme, delivery of glucose substrate to the reaction mixture through the oil phase, and covalent labeling of the cells with fluorescein-tyramide. The method enables quantitative screening of gene libraries to identify clones with improved activity and it also allows cells to be selected based not only on the overall activity but also on the specific activity of the enzyme.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24613019     DOI: 10.1016/j.chembiol.2014.01.010

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  16 in total

1.  Yeast Surface Display for Protein Engineering: Library Generation, Screening, and Affinity Maturation.

Authors:  Byong H Kang; Brianna M Lax; K Dane Wittrup
Journal:  Methods Mol Biol       Date:  2022

2.  Developing a cell-bound detection system for the screening of oxidase activity using the fluorescent peroxide sensor roGFP2-Orp1.

Authors:  P L Herzog; E Borghi; M W Traxlmayr; C Obinger; H D Sikes; C K Peterbauer
Journal:  Protein Eng Des Sel       Date:  2020-09-14       Impact factor: 1.650

Review 3.  Advances in the directed evolution of proteins.

Authors:  Michael D Lane; Burckhard Seelig
Journal:  Curr Opin Chem Biol       Date:  2014-10-11       Impact factor: 8.822

4.  Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase.

Authors:  Dušan Petrović; David Frank; Shina Caroline Lynn Kamerlin; Kurt Hoffmann; Birgit Strodel
Journal:  ACS Catal       Date:  2017-08-01       Impact factor: 13.084

Review 5.  Improvement Strategies, Cost Effective Production, and Potential Applications of Fungal Glucose Oxidase (GOD): Current Updates.

Authors:  Manish K Dubey; Andleeb Zehra; Mohd Aamir; Mukesh Meena; Laxmi Ahirwal; Siddhartha Singh; Shruti Shukla; Ram S Upadhyay; Ruben Bueno-Mari; Vivek K Bajpai
Journal:  Front Microbiol       Date:  2017-06-13       Impact factor: 5.640

6.  A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries.

Authors:  Radivoje Prodanović; W Lloyd Ung; Karla Ilić Đurđić; Rainer Fischer; David A Weitz; Raluca Ostafe
Journal:  Molecules       Date:  2020-05-22       Impact factor: 4.411

7.  Ultra-high throughput functional enrichment of large monoamine oxidase (MAO-N) libraries by fluorescence activated cell sorting.

Authors:  Joanna C Sadler; Andrew Currin; Douglas B Kell
Journal:  Analyst       Date:  2018-09-24       Impact factor: 4.616

8.  Identification and Structural Analysis of Amino Acid Substitutions that Increase the Stability and Activity of Aspergillus niger Glucose Oxidase.

Authors:  Julia Marín-Navarro; Nicole Roupain; David Talens-Perales; Julio Polaina
Journal:  PLoS One       Date:  2015-12-07       Impact factor: 3.240

9.  Enhanced Thermostability of Glucose Oxidase through Computer-Aided Molecular Design.

Authors:  Xiaoyan Ning; Yanli Zhang; Tiantian Yuan; Qingbin Li; Jian Tian; Weishi Guan; Bo Liu; Wei Zhang; Xinxin Xu; Yuhong Zhang
Journal:  Int J Mol Sci       Date:  2018-01-31       Impact factor: 5.923

10.  High-throughput analysis and protein engineering using microcapillary arrays.

Authors:  Bob Chen; Sungwon Lim; Arvind Kannan; Spencer C Alford; Fanny Sunden; Daniel Herschlag; Ivan K Dimov; Thomas M Baer; Jennifer R Cochran
Journal:  Nat Chem Biol       Date:  2015-12-07       Impact factor: 15.040

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