Literature DB >> 2460435

Nucleotide sequence of the nfo gene of Escherichia coli K-12.

S M Saporito1, R P Cunningham.   

Abstract

The nfo gene of Escherichia coli K-12 which encodes endonuclease IV has been sequenced. The predicted gene product has a molecular weight of 31,562, in good agreement with the size of the gene product estimated by maxicell analysis. The nfo promoter was mapped by primer extension of in vivo transcripts. Inspection of the nucleotide sequence revealed no regions of potential secondary structure corresponding to a transcriptional terminator downstream from the structural gene; however, there was a potential open reading frame immediately downstream from the nfo structural gene.

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Year:  1988        PMID: 2460435      PMCID: PMC211582          DOI: 10.1128/jb.170.11.5141-5145.1988

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  27 in total

1.  Methyl methane sulfonate-sensitive mutant of Escherichia coli deficient in an endonuclease specific for apurinic sites in deoxyribonucleic acid.

Authors:  S Ljungquist; T Lindahl; P Howard-Flanders
Journal:  J Bacteriol       Date:  1976-05       Impact factor: 3.490

2.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

3.  Cloning of uvrA, lexC and ssb genes of Escherichia coli.

Authors:  A Sancar; W D Rupp
Journal:  Biochem Biophys Res Commun       Date:  1979-09-12       Impact factor: 3.575

4.  Simple method for identification of plasmid-coded proteins.

Authors:  A Sancar; A M Hack; W D Rupp
Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

5.  Regulation of the synthesis of superoxide dismutase in Escherichia coli. Induction by methyl viologen.

Authors:  H M Hassan; I Fridovich
Journal:  J Biol Chem       Date:  1977-11-10       Impact factor: 5.157

6.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

7.  Exonuclease III of Escherichia coli K-12, an AP endonuclease.

Authors:  S G Rogers; B Weiss
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  Nucleotide sequence of the xth gene of Escherichia coli K-12.

Authors:  S M Saporito; B J Smith-White; R P Cunningham
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

9.  A new endonuclease from Escherichia coli acting at apurinic sites in DNA.

Authors:  S Ljungquist
Journal:  J Biol Chem       Date:  1977-05-10       Impact factor: 5.157

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  17 in total

1.  Forespore-specific expression of Bacillus subtilis yqfS, which encodes type IV apurinic/apyrimidinic endonuclease, a component of the base excision repair pathway.

Authors:  Norma Urtiz-Estrada; José M Salas-Pacheco; Ronald E Yasbin; Mario Pedraza-Reyes
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

2.  Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli.

Authors:  J Wu; B Weiss
Journal:  J Bacteriol       Date:  1991-05       Impact factor: 3.490

Review 3.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

4.  Role of exonuclease III and endonuclease IV in repair of pyrimidine dimers initiated by bacteriophage T4 pyrimidine dimer-DNA glycosylase.

Authors:  S M Saporito; M Gedenk; R P Cunningham
Journal:  J Bacteriol       Date:  1989-05       Impact factor: 3.490

5.  The exoA gene of Streptococcus pneumoniae and its product, a DNA exonuclease with apurinic endonuclease activity.

Authors:  A Puyet; B Greenberg; S A Lacks
Journal:  J Bacteriol       Date:  1989-05       Impact factor: 3.490

6.  Enhanced activity of adenine-DNA glycosylase (Myh) by apurinic/apyrimidinic endonuclease (Ape1) in mammalian base excision repair of an A/GO mismatch.

Authors:  H Yang; W M Clendenin; D Wong; B Demple; M M Slupska; J H Chiang; J H Miller
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

7.  Genetic definition of the Escherichia coli zwf "soxbox," the DNA binding site for SoxS-mediated induction of glucose 6-phosphate dehydrogenase in response to superoxide.

Authors:  W P Fawcett; R E Wolf
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

8.  Fumarase C, the stable fumarase of Escherichia coli, is controlled by the soxRS regulon.

Authors:  S I Liochev; I Fridovich
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

9.  A mutant endonuclease IV of Escherichia coli loses the ability to repair lethal DNA damage induced by hydrogen peroxide but not that induced by methyl methanesulfonate.

Authors:  T Izumi; K Ishizaki; M Ikenaga; S Yonei
Journal:  J Bacteriol       Date:  1992-12       Impact factor: 3.490

10.  YqfS from Bacillus subtilis is a spore protein and a new functional member of the type IV apurinic/apyrimidinic-endonuclease family.

Authors:  José M Salas-Pacheco; Norma Urtiz-Estrada; Guadalupe Martínez-Cadena; Ronald E Yasbin; Mario Pedraza-Reyes
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

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