Literature DB >> 3049539

Nucleotide sequence of the xth gene of Escherichia coli K-12.

S M Saporito1, B J Smith-White, R P Cunningham.   

Abstract

The xth gene of Escherichia coli K-12, which encodes exonuclease III, has been sequenced. Exonuclease III from a cloned copy of the E. coli K-12 gene has been purified and characterized. The molecular weight (30,921), the amino-terminal amino acid sequence, and the amino acid composition of the polypeptide predicted from the nucleotide sequence are in excellent agreement with those properties determined for the purified enzyme. The xth promoter was mapped by primer extension of in vivo transcripts. Inspection of the nucleotide sequence reveals that a region of dyad symmetry which could form a hairpin stem-loop structure in RNA characteristic of a rho-dependent terminator lies immediately downstream from the xth gene.

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Year:  1988        PMID: 3049539      PMCID: PMC211488          DOI: 10.1128/jb.170.10.4542-4547.1988

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  45 in total

1.  Purification of Escherichia coli endonuclease specific for apurinic sites in DNA.

Authors:  W G Verly; E Rassart
Journal:  J Biol Chem       Date:  1975-10-25       Impact factor: 5.157

2.  Methyl methane sulfonate-sensitive mutant of Escherichia coli deficient in an endonuclease specific for apurinic sites in deoxyribonucleic acid.

Authors:  S Ljungquist; T Lindahl; P Howard-Flanders
Journal:  J Bacteriol       Date:  1976-05       Impact factor: 3.490

3.  Endonuclease II of Escherichia coli is exonuclease III.

Authors:  B Weiss
Journal:  J Biol Chem       Date:  1976-04-10       Impact factor: 5.157

4.  Properties of the main endonuclease specific for apurinic sites of Escherichia coli (endonuclease VI). Mechanism of apurinic site excision from DNA.

Authors:  F Gossard; W G Verly
Journal:  Eur J Biochem       Date:  1978-01-16

5.  Improved estimation of secondary structure in ribonucleic acids.

Authors:  I Tinoco; P N Borer; B Dengler; M D Levin; O C Uhlenbeck; D M Crothers; J Bralla
Journal:  Nat New Biol       Date:  1973-11-14

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Mutations simultaneously affecting endonuclease II and exonuclease III in Escherichia coli.

Authors:  D M Yajko; B Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1975-02       Impact factor: 11.205

8.  A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome.

Authors:  L Clarke; J Carbon
Journal:  Cell       Date:  1976-09       Impact factor: 41.582

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  33 in total

1.  Nucleotide sequence of a cDNA for an apurinic/apyrimidinic endonuclease from HeLa cells.

Authors:  X B Cheng; J Bunville; T A Patterson
Journal:  Nucleic Acids Res       Date:  1992-01-25       Impact factor: 16.971

2.  The glutamate dehydrogenase structural gene of Escherichia coli.

Authors:  R B Helling
Journal:  Mol Gen Genet       Date:  1990-09

3.  Isolation of cDNA clones encoding a human apurinic/apyrimidinic endonuclease that corrects DNA repair and mutagenesis defects in E. coli xth (exonuclease III) mutants.

Authors:  C N Robson; I D Hickson
Journal:  Nucleic Acids Res       Date:  1991-10-25       Impact factor: 16.971

4.  Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S.

Authors:  R Lange; R Hengge-Aronis
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

5.  Stationary-phase-inducible "gearbox" promoters: differential effects of katF mutations and role of sigma 70.

Authors:  D E Bohannon; N Connell; J Keener; A Tormo; M Espinosa-Urgel; M M Zambrano; R Kolter
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

6.  Nucleotide sequence of Escherichia coli katE, which encodes catalase HPII.

Authors:  I von Ossowski; M R Mulvey; P A Leco; A Borys; P C Loewen
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

7.  Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S.

Authors:  A Wise; R Brems; V Ramakrishnan; M Villarejo
Journal:  J Bacteriol       Date:  1996-05       Impact factor: 3.490

Review 8.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

9.  Cloning and expression of APE, the cDNA encoding the major human apurinic endonuclease: definition of a family of DNA repair enzymes.

Authors:  B Demple; T Herman; D S Chen
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-15       Impact factor: 11.205

10.  Physical association of the 2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase of Escherichia coli and an activity nicking DNA at apurinic/apyrimidinic sites.

Authors:  T R O'Connor; J Laval
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

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