Literature DB >> 21639491

The use of dynamic light scattering and brownian microscopy to characterize protein aggregation.

Ye Li1, Vassiliy Lubchenko, Peter G Vekilov.   

Abstract

Dynamic light scattering (DLS) is often used to monitor aggregation in protein solutions. Here, we explore the veracity of the aggregate sizes, size distribution widths, concentrations, and lifetime resulting from DLS. We use as an example a solution of the protein lysozyme in which dense liquid clusters of radius about 100 nm reproducibly exist. We compare the results of DLS to those of brownian microscopy. We show that because of the sixth power dependence of the scattered light intensity on the size of the scatterers, DLS overestimates the mean size of the clusters. The factor of overestimation depends on the shape of the size distribution and is ∼1.6 × in the studied solution. The related underestimate of the cluster concentration is ∼10 ×. The CONTIN algorithm, often employed to process DLS data, may, in some instances, produce non-physical results. We put forth an alternative method to determine the aggregates' sizes, concentrations, and volume fractions. We show that DLS yields a reliable width of the cluster size distribution only if the cluster concentration is above 10(9) cm(-3) and their volume fraction is above 10(-6). DLS yields a lower bound of the cluster lifetime, which may be orders of magnitude lower than the real one.

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Year:  2011        PMID: 21639491     DOI: 10.1063/1.3592581

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  13 in total

1.  Lack of Dependence of the Sizes of the Mesoscopic Protein Clusters on Electrostatics.

Authors:  Maria A Vorontsova; Ho Yin Chan; Vassiliy Lubchenko; Peter G Vekilov
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

2.  Mixing of oxidized and bilayer phospholipids.

Authors:  Jasmeet Singh; Radha Ranganathan
Journal:  Biochim Biophys Acta       Date:  2015-04-01

Review 3.  Nucleation precursors in protein crystallization.

Authors:  Peter G Vekilov; Maria A Vorontsova
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-02-20       Impact factor: 1.056

4.  A charge-sensing region in the stromal interaction molecule 1 luminal domain confers stabilization-mediated inhibition of SOCE in response to S-nitrosylation.

Authors:  Jinhui Zhu; Xiangru Lu; Qingping Feng; Peter B Stathopulos
Journal:  J Biol Chem       Date:  2018-04-16       Impact factor: 5.157

5.  NMR and dynamic light scattering give different diffusion information for short-living protein oligomers. Human serum albumin in water solutions of metal ions.

Authors:  A M Kusova; A K Iskhakova; Yu F Zuev
Journal:  Eur Biophys J       Date:  2022-06-10       Impact factor: 1.733

Review 6.  Protein conformation and biomolecular condensates.

Authors:  Diego S Vazquez; Pamela L Toledo; Alejo R Gianotti; Mario R Ermácora
Journal:  Curr Res Struct Biol       Date:  2022-09-14

7.  Calcium ions promote superoxide dismutase 1 (SOD1) aggregation into non-fibrillar amyloid: a link to toxic effects of calcium overload in amyotrophic lateral sclerosis (ALS)?

Authors:  Sónia S Leal; Isabel Cardoso; Joan S Valentine; Cláudio M Gomes
Journal:  J Biol Chem       Date:  2013-07-16       Impact factor: 5.157

8.  Do protein crystals nucleate within dense liquid clusters?

Authors:  Dominique Maes; Maria A Vorontsova; Marco A C Potenza; Tiziano Sanvito; Mike Sleutel; Marzio Giglio; Peter G Vekilov
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-06-27       Impact factor: 1.056

9.  Combination therapy for tuberculosis treatment: pulmonary administration of ethionamide and booster co-loaded nanoparticles.

Authors:  Joana Costa-Gouveia; Elisabetta Pancani; Samuel Jouny; Arnaud Machelart; Vincent Delorme; Giuseppina Salzano; Raffaella Iantomasi; Catherine Piveteau; Christophe J Queval; Ok-Ryul Song; Marion Flipo; Benoit Deprez; Jean-Paul Saint-André; José Hureaux; Laleh Majlessi; Nicolas Willand; Alain Baulard; Priscille Brodin; Ruxandra Gref
Journal:  Sci Rep       Date:  2017-07-14       Impact factor: 4.379

10.  Silver nanoparticles as a medical device in healthcare settings: a five-step approach for candidate screening of coating agents.

Authors:  Valentina Marassi; Luisana Di Cristo; Stephen G J Smith; Simona Ortelli; Magda Blosi; Anna L Costa; Pierluigi Reschiglian; Yuri Volkov; Adriele Prina-Mello
Journal:  R Soc Open Sci       Date:  2018-01-31       Impact factor: 2.963

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