Literature DB >> 24593935

Sparse regularization for fiber ODF reconstruction: from the suboptimality of ℓ2 and ℓ1 priors to ℓ0.

Alessandro Daducci1, Dimitri Van De Ville2, Jean-Philippe Thiran3, Yves Wiaux4.   

Abstract

Diffusion MRI is a well established imaging modality providing a powerful way to probe the structure of the white matter non-invasively. Despite its potential, the intrinsic long scan times of these sequences have hampered their use in clinical practice. For this reason, a large variety of methods have been recently proposed to shorten the acquisition times. Among them, spherical deconvolution approaches have gained a lot of interest for their ability to reliably recover the intra-voxel fiber configuration with a relatively small number of data samples. To overcome the intrinsic instabilities of deconvolution, these methods use regularization schemes generally based on the assumption that the fiber orientation distribution (FOD) to be recovered in each voxel is sparse. The well known Constrained Spherical Deconvolution (CSD) approach resorts to Tikhonov regularization, based on an ℓ(2)-norm prior, which promotes a weak version of sparsity. Also, in the last few years compressed sensing has been advocated to further accelerate the acquisitions and ℓ(1)-norm minimization is generally employed as a means to promote sparsity in the recovered FODs. In this paper, we provide evidence that the use of an ℓ(1)-norm prior to regularize this class of problems is somewhat inconsistent with the fact that the fiber compartments all sum up to unity. To overcome this ℓ(1) inconsistency while simultaneously exploiting sparsity more optimally than through an ℓ(2) prior, we reformulate the reconstruction problem as a constrained formulation between a data term and a sparsity prior consisting in an explicit bound on the ℓ(0)norm of the FOD, i.e. on the number of fibers. The method has been tested both on synthetic and real data. Experimental results show that the proposed ℓ(0) formulation significantly reduces modeling errors compared to the state-of-the-art ℓ(2) and ℓ(1) regularization approaches.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Compressed sensing; Diffusion MRI; HARDI; Reconstruction

Mesh:

Year:  2014        PMID: 24593935     DOI: 10.1016/j.media.2014.01.011

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  19 in total

1.  Multi-Tissue Decomposition of Diffusion MRI Signals via Sparse-Group Estimation.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2016-07-07       Impact factor: 10.856

2.  Histologically derived fiber response functions for diffusion MRI vary across white matter fibers-An ex vivo validation study in the squirrel monkey brain.

Authors:  Kurt G Schilling; Yurui Gao; Iwona Stepniewska; Vaibhav Janve; Bennett A Landman; Adam W Anderson
Journal:  NMR Biomed       Date:  2019-03-25       Impact factor: 4.044

3.  Estimation of white matter fiber parameters from compressed multiresolution diffusion MRI using sparse Bayesian learning.

Authors:  Pramod Kumar Pisharady; Stamatios N Sotiropoulos; Julio M Duarte-Carvajalino; Guillermo Sapiro; Christophe Lenglet
Journal:  Neuroimage       Date:  2017-06-29       Impact factor: 6.556

4.  A Bayesian approach to distinguishing interdigitated tongue muscles from limited diffusion magnetic resonance imaging.

Authors:  Chuyang Ye; Emi Murano; Maureen Stone; Jerry L Prince
Journal:  Comput Med Imaging Graph       Date:  2015-07-21       Impact factor: 4.790

5.  PROBABILISTIC FIBER TRACKING USING A MODIFIED LASSO BOOTSTRAP METHOD.

Authors:  Chuyang Ye; Jeffrey Glaister; Jerry L Prince
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2015-04

6.  Fiber Orientation Estimation Guided by a Deep Network.

Authors:  Chuyang Ye; Jerry L Prince
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

7.  Estimating fiber orientation distribution from diffusion MRI with spherical needlets.

Authors:  Hao Yan; Owen Carmichael; Debashis Paul; Jie Peng
Journal:  Med Image Anal       Date:  2018-02-08       Impact factor: 8.545

8.  Brain Tissue Segmentation Based on Diffusion MRI Using ℓ0 Sparse-Group Representation Classification.

Authors:  Pew-Thian Yap; Yong Zhang; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2015-11-18

9.  Probabilistic tractography using Lasso bootstrap.

Authors:  Chuyang Ye; Jerry L Prince
Journal:  Med Image Anal       Date:  2016-09-16       Impact factor: 8.545

10.  Estimation of fiber orientations using neighborhood information.

Authors:  Chuyang Ye; Jiachen Zhuo; Rao P Gullapalli; Jerry L Prince
Journal:  Med Image Anal       Date:  2016-05-16       Impact factor: 8.545

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