Literature DB >> 27563391

PROBABILISTIC FIBER TRACKING USING A MODIFIED LASSO BOOTSTRAP METHOD.

Chuyang Ye1, Jeffrey Glaister1, Jerry L Prince1.   

Abstract

Diffusion MRI (dMRI) provides a noninvasive tool for investigating white matter tracts. Probabilistic fiber tracking has been proposed to represent the fiber structures as 3D streamlines while taking the uncertainty introduced by noise into account. In this paper, we propose a probabilistic fiber tracking method based on bootstrapping a multi-tensor model with a fixed tensor basis. The fiber orientation (FO) estimation is formulated as a Lasso problem. Then by resampling the residuals calculated using a modified Lasso estimator to create synthetic diffusion signals, a distribution of FOs is estimated. Probabilistic fiber tracking can then be performed by sampling from the FO distribution. Experiments were performed on a digital crossing phantom and brain dMRI for validation.

Entities:  

Keywords:  Diffusion MRI; Lasso bootstrap; probabilistic fiber tracking

Year:  2015        PMID: 27563391      PMCID: PMC4994892          DOI: 10.1109/ISBI.2015.7164026

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  11 in total

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Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
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Authors:  David S Tuch; Timothy G Reese; Mette R Wiegell; Nikos Makris; John W Belliveau; Van J Wedeen
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3.  Comparison of bootstrap approaches for estimation of uncertainties of DTI parameters.

Authors:  SungWon Chung; Ying Lu; Roland G Henry
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4.  Using the wild bootstrap to quantify uncertainty in diffusion tensor imaging.

Authors:  Brandon Whitcher; David S Tuch; Jonathan J Wisco; A Gregory Sorensen; Liqun Wang
Journal:  Hum Brain Mapp       Date:  2008-03       Impact factor: 5.038

5.  Probabilistic streamline q-ball tractography using the residual bootstrap.

Authors:  Jeffrey I Berman; SungWon Chung; Pratik Mukherjee; Christopher P Hess; Eric T Han; Roland G Henry
Journal:  Neuroimage       Date:  2007-08-25       Impact factor: 6.556

6.  Resolution of crossing fibers with constrained compressed sensing using diffusion tensor MRI.

Authors:  Bennett A Landman; John A Bogovic; Hanlin Wan; Fatma El Zahraa ElShahaby; Pierre-Louis Bazin; Jerry L Prince
Journal:  Neuroimage       Date:  2011-10-14       Impact factor: 6.556

7.  Tractography gone wild: probabilistic fibre tracking using the wild bootstrap with diffusion tensor MRI.

Authors:  Derek K Jones
Journal:  IEEE Trans Med Imaging       Date:  2008-09       Impact factor: 10.048

8.  Probabilistic fiber tracking using the residual bootstrap with constrained spherical deconvolution.

Authors:  Ben Jeurissen; Alexander Leemans; Derek K Jones; Jacques-Donald Tournier; Jan Sijbers
Journal:  Hum Brain Mapp       Date:  2011-03       Impact factor: 5.038

9.  Sparse regularization for fiber ODF reconstruction: from the suboptimality of ℓ2 and ℓ1 priors to ℓ0.

Authors:  Alessandro Daducci; Dimitri Van De Ville; Jean-Philippe Thiran; Yves Wiaux
Journal:  Med Image Anal       Date:  2014-02-17       Impact factor: 8.545

10.  A Bayesian Approach to Distinguishing Interdigitated Muscles in the Tongue from Limited Diffusion Weighted Imaging.

Authors:  Chuyang Ye; Aaron Carass; Emi Murano; Maureen Stone; Jerry L Prince
Journal:  Bayesian Graph Models Biomed Imaging (2014)       Date:  2014
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  1 in total

1.  Probabilistic tractography using Lasso bootstrap.

Authors:  Chuyang Ye; Jerry L Prince
Journal:  Med Image Anal       Date:  2016-09-16       Impact factor: 8.545

  1 in total

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