Literature DB >> 24584093

Existence and consequences of G-quadruplex structures in DNA.

Pierre Murat1, Shankar Balasubramanian2.   

Abstract

While the discovery of B-form DNA 60 years ago has defined our molecular view of the genetic code, other postulated DNA secondary structures, such as A-DNA, Z-DNA, H-DNA, cruciform and slipped structures have provoked consideration of DNA as a more dynamic structure. Four-stranded G-quadruplex DNA does not use Watson-Crick base pairing and has been subject of considerable speculation and investigation during the past decade, particularly with regard to its potential relevance to genome integrity and gene expression. Here, we discuss recent data that collectively support the formation of G-quadruplexes in genomic DNA and the consequences of formation of this structural motif in biological processes.
Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2013        PMID: 24584093     DOI: 10.1016/j.gde.2013.10.012

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  104 in total

1.  Evidence for the kinetic partitioning of polymerase activity on G-quadruplex DNA.

Authors:  Sarah Eddy; Leena Maddukuri; Amit Ketkar; Maroof K Zafar; Erin E Henninger; Zachary F Pursell; Robert L Eoff
Journal:  Biochemistry       Date:  2015-05-11       Impact factor: 3.162

Review 2.  G4-associated human diseases.

Authors:  Nancy Maizels
Journal:  EMBO Rep       Date:  2015-07-06       Impact factor: 8.807

3.  A mechanism for the extension and unfolding of parallel telomeric G-quadruplexes by human telomerase at single-molecule resolution.

Authors:  Bishnu P Paudel; Aaron Lavel Moye; Hala Abou Assi; Roberto El-Khoury; Scott B Cohen; Jessica K Holien; Monica L Birrento; Siritron Samosorn; Kamthorn Intharapichai; Christopher G Tomlinson; Marie-Paule Teulade-Fichou; Carlos González; Jennifer L Beck; Masad J Damha; Antoine M van Oijen; Tracy M Bryan
Journal:  Elife       Date:  2020-07-29       Impact factor: 8.140

4.  Mapping the affinity landscape of Thrombin-binding aptamers on 2΄F-ANA/DNA chimeric G-Quadruplex microarrays.

Authors:  Jory Lietard; Hala Abou Assi; Irene Gómez-Pinto; Carlos González; Mark M Somoza; Masad J Damha
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

5.  A biochemical and biophysical model of G-quadruplex DNA recognition by positive coactivator of transcription 4.

Authors:  Wezley C Griffin; Jun Gao; Alicia K Byrd; Shubeena Chib; Kevin D Raney
Journal:  J Biol Chem       Date:  2017-04-17       Impact factor: 5.157

6.  Transcriptional control by G-quadruplexes: In vivo roles and perspectives for specific intervention.

Authors:  Pablo Armas; Aldana David; Nora B Calcaterra
Journal:  Transcription       Date:  2016-10-03

7.  A parallel quadruplex DNA is bound tightly but unfolded slowly by pif1 helicase.

Authors:  Alicia K Byrd; Kevin D Raney
Journal:  J Biol Chem       Date:  2015-01-14       Impact factor: 5.157

8.  In Vivo Chemical Probing for G-Quadruplex Formation.

Authors:  Fedor Kouzine; Damian Wojtowicz; Arito Yamane; Rafael Casellas; Teresa M Przytycka; David L Levens
Journal:  Methods Mol Biol       Date:  2019

9.  Human Translesion Polymerase κ Exhibits Enhanced Activity and Reduced Fidelity Two Nucleotides from G-Quadruplex DNA.

Authors:  Sarah Eddy; Magdalena Tillman; Leena Maddukuri; Amit Ketkar; Maroof K Zafar; Robert L Eoff
Journal:  Biochemistry       Date:  2016-09-07       Impact factor: 3.162

10.  Chemical modifications of DNA for study of helicase mechanisms.

Authors:  Kevin D Raney
Journal:  Bioorg Med Chem       Date:  2014-06-02       Impact factor: 3.641

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