Literature DB >> 24575333

Video-rate structured illumination microscopy for high-throughput imaging of large tissue areas.

Tyler C Schlichenmeyer1, Mei Wang1, Katherine N Elfer1, J Quincy Brown1.   

Abstract

We report the development of a structured illumination microscopy instrument specifically designed for the requirements for high-area-throughput, optically-sectioned imaging of large, fluorescently-stained tissue specimens. The system achieves optical sectioning frame-rates of up to 33 Hz (and pixel sampling rates of up to 138.4 MHz), by combining a fast, ferroelectric spatial light modulator for pattern generation with the latest large-format, high frame-rate scientific CMOS camera technology. Using a 10X 0.45 NA objective and a 7 mm/sec scan stage, we demonstrate 4.4 cm(2)/min area-throughput rates in bright tissue-simulating phantoms, and 2 cm(2)/min area-throughput rates in thick, highly-absorbing, fluorescently-stained muscle tissue, with 1.3 μm lateral resolution. We demonstrate high-contrast, high-resolution imaging of a fluorescently-stained 30.4 cm(2) bovine muscle specimen in 15 minutes comprising 7.55 gigapixels, demonstrating the feasibility of the approach for gigapixel imaging of large tissues in short timeframes, such as would be needed for intraoperative imaging of tumor resection specimens.

Entities:  

Keywords:  (170.1610) Clinical applications; (170.2520) Fluorescence microscopy; (170.4730) Optical pathology

Year:  2014        PMID: 24575333      PMCID: PMC3920869          DOI: 10.1364/BOE.5.000366

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  17 in total

1.  Fast optical sectioning obtained by structured illumination microscopy using a digital mirror device.

Authors:  Dongli Xu; Tao Jiang; Anan Li; Bihe Hu; Zhao Feng; Hui Gong; Shaoqun Zeng; Qingming Luo
Journal:  J Biomed Opt       Date:  2013-06       Impact factor: 3.170

Review 2.  Real-time pathology through in vivo microscopy.

Authors:  Jonathan T C Liu; Nathan O Loewke; Michael J Mandella; Steven Y Leigh; Richard M Levenson; James M Crawford; Christopher H Contag
Journal:  Stud Health Technol Inform       Date:  2013

Review 3.  Management of rising prostate-specific antigen after a negative biopsy.

Authors:  David A Levy; J Stephen Jones
Journal:  Curr Urol Rep       Date:  2011-06       Impact factor: 3.092

4.  Optical assessment of tumor resection margins in the breast.

Authors:  J Quincy Brown; Torre M Bydlon; Lisa M Richards; Bing Yu; Stephanie A Kennedy; Joseph Geradts; Lee G Wilke; Marlee Junker; Jennifer Gallagher; William Barry; Nimmi Ramanujam
Journal:  IEEE J Sel Top Quantum Electron       Date:  2010-03-01       Impact factor: 4.544

5.  Imaging inflammation in mouse colon using a rapid stage-scanning confocal fluorescence microscope.

Authors:  Meagan A Saldua; Cory A Olsovsky; Evelyn S Callaway; Robert S Chapkin; Kristen C Maitland
Journal:  J Biomed Opt       Date:  2012-01       Impact factor: 3.170

Review 6.  Positive surgical margins in radical prostatectomy: outlining the problem and its long-term consequences.

Authors:  Ofer Yossepowitch; Anders Bjartell; James A Eastham; Markus Graefen; Bertrand D Guillonneau; Pierre I Karakiewicz; Rodolfo Montironi; Franceso Montorsi
Journal:  Eur Urol       Date:  2008-10-01       Impact factor: 20.096

7.  Feasibility of confocal fluorescence microscopy for real-time evaluation of neoplasia in fresh human breast tissue.

Authors:  Jessica L Dobbs; Hao Ding; Ana Paula Benveniste; Henry M Kuerer; Savitri Krishnamurthy; Wei Yang; Rebecca Richards-Kortum
Journal:  J Biomed Opt       Date:  2013-10       Impact factor: 3.170

8.  Dual modality fluorescence confocal and spectral-domain optical coherence tomography microendoscope.

Authors:  Houssine Makhlouf; Andrew R Rouse; Arthur F Gmitro
Journal:  Biomed Opt Express       Date:  2011-02-22       Impact factor: 3.732

9.  Quantitative sectioning and noise analysis for structured illumination microscopy.

Authors:  Nathan Hagen; Liang Gao; Tomasz S Tkaczyk
Journal:  Opt Express       Date:  2012-01-02       Impact factor: 3.894

10.  Optimization of a widefield structured illumination microscope for non-destructive assessment and quantification of nuclear features in tumor margins of a primary mouse model of sarcoma.

Authors:  Henry L Fu; Jenna L Mueller; Melodi P Javid; Jeffrey K Mito; David G Kirsch; Nimmi Ramanujam; J Quincy Brown
Journal:  PLoS One       Date:  2013-07-23       Impact factor: 3.240

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  24 in total

1.  Rapid staining and imaging of subnuclear features to differentiate between malignant and benign breast tissues at a point-of-care setting.

Authors:  Jenna L Mueller; Jennifer E Gallagher; Rhea Chitalia; Marlee Krieger; Alaattin Erkanli; Rebecca M Willett; Joseph Geradts; Nimmi Ramanujam
Journal:  J Cancer Res Clin Oncol       Date:  2016-04-22       Impact factor: 4.553

2.  Rapid imaging of large tissues using high-resolution stage-scanning microscopy.

Authors:  Tao Yang; Ting Zheng; Zhenhua Shang; Xiaojun Wang; Xiaohua Lv; Jing Yuan; Shaoqun Zeng
Journal:  Biomed Opt Express       Date:  2015-04-23       Impact factor: 3.732

3.  Rapid pathology of lumpectomy margins with open-top light-sheet (OTLS) microscopy.

Authors:  Ye Chen; Weisi Xie; Adam K Glaser; Nicholas P Reder; Chenyi Mao; Suzanne M Dintzis; Joshua C Vaughan; Jonathan T C Liu
Journal:  Biomed Opt Express       Date:  2019-02-19       Impact factor: 3.732

4.  Multi-line fluorescence scanning microscope for multi-focal imaging with unlimited field of view.

Authors:  Leon van der Graaff; Geert J L H van Leenders; Fanny Boyaval; Sjoerd Stallinga
Journal:  Biomed Opt Express       Date:  2019-11-18       Impact factor: 3.732

5.  Partial nephrectomy margin imaging using structured illumination microscopy.

Authors:  Mei Wang; David B Tulman; Andrew B Sholl; Sree H Mandava; Michael M Maddox; Benjamin R Lee; J Quincy Brown
Journal:  J Biophotonics       Date:  2017-10-05       Impact factor: 3.207

6.  Nondestructive Diagnosis of Kidney Cancer on 18-gauge Core Needle Renal Biopsy Using Dual-color Fluorescence Structured Illumination Microscopy.

Authors:  James Liu; Mei Wang; David Tulman; Sree H Mandava; Katherine N Elfer; Andrew Gabrielson; Weil Lai; Caleb Abshire; Andrew B Sholl; J Quincy Brown; Benjamin R Lee
Journal:  Urology       Date:  2016-09-03       Impact factor: 2.649

7.  Artifact-free whole-slide imaging with structured illumination microscopy and Bayesian image reconstruction.

Authors:  Karl A Johnson; Guy M Hagen
Journal:  Gigascience       Date:  2020-04-01       Impact factor: 6.524

8.  Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction.

Authors:  Jakub Pospíšil; Tomáš Lukeš; Justin Bendesky; Karel Fliegel; Kathrin Spendier; Guy M Hagen
Journal:  Gigascience       Date:  2019-01-01       Impact factor: 6.524

9.  High-Resolution Rapid Diagnostic Imaging of Whole Prostate Biopsies Using Video-Rate Fluorescence Structured Illumination Microscopy.

Authors:  Mei Wang; Hillary Z Kimbrell; Andrew B Sholl; David B Tulman; Katherine N Elfer; Tyler C Schlichenmeyer; Benjamin R Lee; Michelle Lacey; J Quincy Brown
Journal:  Cancer Res       Date:  2015-08-17       Impact factor: 12.701

10.  Visualization of podocyte substructure with structured illumination microscopy (SIM): a new approach to nephrotic disease.

Authors:  James M Pullman; Jonathan Nylk; Elaine C Campbell; Frank J Gunn-Moore; Michael B Prystowsky; Kishan Dholakia
Journal:  Biomed Opt Express       Date:  2016-01-06       Impact factor: 3.732

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