Literature DB >> 24557909

RNA-guided genome editing of mammalian cells.

Neena K Pyzocha1, F Ann Ran, Patrick D Hsu, Feng Zhang.   

Abstract

The microbial CRISPR-Cas adaptive immune system can be harnessed to facilitate genome editing in eukaryotic cells (Cong L et al., Science 339, 819-823, 2013; Mali P et al., Science 339, 823-826, 2013). Here we describe a protocol for the use of the RNA-guided Cas9 nuclease from the Streptococcus pyogenes type II CRISPR system to achieve specific, scalable, and cost-efficient genome editing in mammalian cells.

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Year:  2014        PMID: 24557909     DOI: 10.1007/978-1-62703-761-7_17

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

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2.  Pre-T Cell Receptors (Pre-TCRs) Leverage Vβ Complementarity Determining Regions (CDRs) and Hydrophobic Patch in Mechanosensing Thymic Self-ligands.

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Journal:  J Biol Chem       Date:  2016-10-05       Impact factor: 5.157

3.  Repair shielding of platinum-DNA lesions in testicular germ cell tumors by high-mobility group box protein 4 imparts cisplatin hypersensitivity.

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Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

4.  A Simple Method that Combines CRISPR and AID to Quickly Generate Conditional Knockouts for Essential Genes in Various Vertebrate Cell Lines.

Authors:  Kohei Nishimura; Tatsuo Fukagawa
Journal:  Methods Mol Biol       Date:  2022

5.  Multiple UBX proteins reduce the ubiquitin threshold of the mammalian p97-UFD1-NPL4 unfoldase.

Authors:  Ryo Fujisawa; Cristian Polo Rivera; Karim P M Labib
Journal:  Elife       Date:  2022-08-03       Impact factor: 8.713

6.  A Simple Method to Generate Super-sensitive AID (ssAID)-based Conditional Knockouts using CRISPR-based Gene Knockout in Various Vertebrate Cell Lines.

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Journal:  Bio Protoc       Date:  2021-07-20

7.  Definitive localization of intracellular proteins: Novel approach using CRISPR-Cas9 genome editing, with glucose 6-phosphate dehydrogenase as a model.

Authors:  Netanya Y Spencer; Ziying Yan; Le Cong; Yulong Zhang; John F Engelhardt; Robert C Stanton
Journal:  Anal Biochem       Date:  2015-11-11       Impact factor: 3.365

8.  MMEJ-assisted gene knock-in using TALENs and CRISPR-Cas9 with the PITCh systems.

Authors:  Tetsushi Sakuma; Shota Nakade; Yuto Sakane; Ken-Ichi T Suzuki; Takashi Yamamoto
Journal:  Nat Protoc       Date:  2015-12-17       Impact factor: 13.491

9.  NSUN3 methylase initiates 5-formylcytidine biogenesis in human mitochondrial tRNA(Met).

Authors:  Saori Nakano; Takeo Suzuki; Layla Kawarada; Hiroyoshi Iwata; Kana Asano; Tsutomu Suzuki
Journal:  Nat Chem Biol       Date:  2016-05-23       Impact factor: 15.040

Review 10.  Genome-edited human stem cell-derived beta cells: a powerful tool for drilling down on type 2 diabetes GWAS biology.

Authors:  Nicola L Beer; Anna L Gloyn
Journal:  F1000Res       Date:  2016-07-15
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