Literature DB >> 24556411

Long noncoding RNAs in innate and adaptive immunity.

Katherine A Fitzgerald1, Daniel R Caffrey2.   

Abstract

The differentiation and activation of both innate and adaptive immune cells is highly dependent on a coordinated set of transcriptional and post-transcriptional events. Chromatin-modifiers and transcription factors regulate the accessibility and transcription of immune genes, respectively. Immune cells also express miRNA and RNA-binding proteins that provide an additional layer of regulation at the mRNA level. However, long noncoding RNAs (lncRNAs), which have been primarily studied in the context of genomic imprinting, cancer, and cell differentiation, are now emerging as important regulators of immune cell differentiation and activation. In this review, we provide a brief overview of lncRNAs, their known functions in immunity, and discuss their potential to be more broadly involved in other aspects of the immune response.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24556411      PMCID: PMC3932021          DOI: 10.1016/j.coi.2013.12.001

Source DB:  PubMed          Journal:  Curr Opin Immunol        ISSN: 0952-7915            Impact factor:   7.486


  68 in total

1.  ceRNAs: miRNA target mimic mimics.

Authors:  Ignacio Rubio-Somoza; Detlef Weigel; José-Manuel Franco-Zorilla; Juan Antonio García; Javier Paz-Ares
Journal:  Cell       Date:  2011-12-23       Impact factor: 41.582

2.  Genome-wide identification of long noncoding RNAs in CD8+ T cells.

Authors:  Ken C Pang; Marcel E Dinger; Tim R Mercer; Lorenzo Malquori; Sean M Grimmond; Weisan Chen; John S Mattick
Journal:  J Immunol       Date:  2009-06-15       Impact factor: 5.422

Review 3.  Viruses, microRNAs, and host interactions.

Authors:  Rebecca L Skalsky; Bryan R Cullen
Journal:  Annu Rev Microbiol       Date:  2010       Impact factor: 15.500

Review 4.  Regulation of mammalian cell differentiation by long non-coding RNAs.

Authors:  Wenqian Hu; Juan R Alvarez-Dominguez; Harvey F Lodish
Journal:  EMBO Rep       Date:  2012-10-16       Impact factor: 8.807

Review 5.  lincRNAs: genomics, evolution, and mechanisms.

Authors:  Igor Ulitsky; David P Bartel
Journal:  Cell       Date:  2013-07-03       Impact factor: 41.582

6.  Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites.

Authors:  Damien Chaussabel; Roshanak Tolouei Semnani; Mary Ann McDowell; David Sacks; Alan Sher; Thomas B Nutman
Journal:  Blood       Date:  2003-03-27       Impact factor: 22.113

7.  A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition.

Authors:  Manuel Beltran; Isabel Puig; Cristina Peña; José Miguel García; Ana Belén Alvarez; Raúl Peña; Félix Bonilla; Antonio García de Herreros
Journal:  Genes Dev       Date:  2008-03-15       Impact factor: 11.361

8.  Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling.

Authors:  Xinxia Peng; Lisa Gralinski; Christopher D Armour; Martin T Ferris; Matthew J Thomas; Sean Proll; Birgit G Bradel-Tretheway; Marcus J Korth; John C Castle; Matthew C Biery; Heather K Bouzek; David R Haynor; Matthew B Frieman; Mark Heise; Christopher K Raymond; Ralph S Baric; Michael G Katze
Journal:  mBio       Date:  2010-10-26       Impact factor: 7.867

9.  Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase.

Authors:  Mohammad Ali Faghihi; Farzaneh Modarresi; Ahmad M Khalil; Douglas E Wood; Barbara G Sahagan; Todd E Morgan; Caleb E Finch; Georges St Laurent; Paul J Kenny; Claes Wahlestedt
Journal:  Nat Med       Date:  2008-06-29       Impact factor: 53.440

10.  Long non-coding RNAs (lncRNAs) and viral infections.

Authors:  Quan Zhang; Kuan-Teh Jeang
Journal:  Biomed Pharmacother       Date:  2013-03-01       Impact factor: 6.529

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  91 in total

Review 1.  Genetics of immune-mediated disorders: from genome-wide association to molecular mechanism.

Authors:  Vinod Kumar; Cisca Wijmenga; Ramnik J Xavier
Journal:  Curr Opin Immunol       Date:  2014-10-14       Impact factor: 7.486

Review 2.  Long non-coding RNAs (lncRNAs) and their transcriptional control of inflammatory responses.

Authors:  Nicholas W Mathy; Xian-Ming Chen
Journal:  J Biol Chem       Date:  2017-06-14       Impact factor: 5.157

3.  MEG3-4 is a miRNA decoy that regulates IL-1β abundance to initiate and then limit inflammation to prevent sepsis during lung infection.

Authors:  Rongpeng Li; Lizhu Fang; Qinqin Pu; Huimin Bu; Pengcheng Zhu; Zihan Chen; Min Yu; Xuefeng Li; Timothy Weiland; Arvind Bansal; Shui Qing Ye; Yuquan Wei; Jianxin Jiang; Min Wu
Journal:  Sci Signal       Date:  2018-06-26       Impact factor: 8.192

Review 4.  Environmental Health and Long Non-coding RNAs.

Authors:  Oskar Karlsson; Andrea A Baccarelli
Journal:  Curr Environ Health Rep       Date:  2016-09

5.  The NF-κB-Responsive Long Noncoding RNA FIRRE Regulates Posttranscriptional Regulation of Inflammatory Gene Expression through Interacting with hnRNPU.

Authors:  Yajing Lu; Xu Liu; Minghong Xie; Mingjia Liu; Mengling Ye; Mingxuan Li; Xian-Ming Chen; Xiaoqing Li; Rui Zhou
Journal:  J Immunol       Date:  2017-10-09       Impact factor: 5.422

Review 6.  ncRNA-regulated immune response and its role in inflammatory lung diseases.

Authors:  Na Xie; Gang Liu
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2015-10-02       Impact factor: 5.464

Review 7.  Epigenetics in osteoarthritis: Potential of HDAC inhibitors as therapeutics.

Authors:  Nazir M Khan; Tariq M Haqqi
Journal:  Pharmacol Res       Date:  2017-08-18       Impact factor: 7.658

Review 8.  Translating the Untranslated Region.

Authors:  Johannes Schwerk; Ram Savan
Journal:  J Immunol       Date:  2015-10-01       Impact factor: 5.422

9.  Increased expression of long noncoding RNAs LOC100652951 and LOC100506036 in T cells from patients with rheumatoid arthritis facilitates the inflammatory responses.

Authors:  Ming-Chi Lu; Hui-Chun Yu; Chia-Li Yu; Hsien-Bin Huang; Malcolm Koo; Chien-Hsueh Tung; Ning-Sheng Lai
Journal:  Immunol Res       Date:  2016-04       Impact factor: 2.829

10.  Long non-coding RNA ANRIL regulates inflammatory responses as a novel component of NF-κB pathway.

Authors:  Xiao Zhou; Xiaorui Han; Ann Wittfeldt; Jingzhi Sun; Chujun Liu; Xiaoxia Wang; Li-Ming Gan; Huiqing Cao; Zicai Liang
Journal:  RNA Biol       Date:  2016       Impact factor: 4.652

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