Literature DB >> 24550308

Nuclear compartmentalization of odorant receptor genes.

Lucia M Armelin-Correa1, Luciana M Gutiyama, Débora Y C Brandt, Bettina Malnic.   

Abstract

Odorants are detected by odorant receptors, which are located on olfactory sensory neurons of the nose. Each olfactory sensory neuron expresses one single odorant receptor gene allele from a large family of odorant receptor genes. To gain insight into the mechanisms underlying this monogenic and monoallelic expression, we examined the 3D nuclear organization of olfactory sensory neurons and determined the positions of homologous odorant receptor gene alleles in relation to different nuclear compartments. Our results show that olfactory neurons exhibit a singular nuclear architecture that is characterized by a large centrally localized constitutive heterochromatin block and by the presence of prominent facultative heterochromatin domains that are localized around this constitutive heterochromatin block. We also found that the two homologous alleles of a given odorant receptor gene are frequently segregated to separate compartments in the nucleus, with one of the alleles localized to the constitutive heterochromatin block and the other one localized to the more plastic facultative heterochromatin, or next to it. Our findings suggest that this nuclear compartmentalization may play a critical role in the expression of odorant receptor genes.

Keywords:  H3K27me3; OR gene choice; chromatin

Mesh:

Substances:

Year:  2014        PMID: 24550308      PMCID: PMC3932893          DOI: 10.1073/pnas.1317036111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Combinatorial receptor codes for odors.

Authors:  B Malnic; J Hirono; T Sato; L B Buck
Journal:  Cell       Date:  1999-03-05       Impact factor: 41.582

2.  Gene switching and the stability of odorant receptor gene choice.

Authors:  Benjamin M Shykind; S Christy Rohani; Sean O'Donnell; Adriana Nemes; Monica Mendelsohn; Yonghua Sun; Richard Axel; Gilad Barnea
Journal:  Cell       Date:  2004-06-11       Impact factor: 41.582

3.  Epigenetic ontogeny of the Igk locus during B cell development.

Authors:  Maya Goldmit; Yanhong Ji; Jane Skok; Esther Roldan; Steffen Jung; Howard Cedar; Yehudit Bergman
Journal:  Nat Immunol       Date:  2004-12-26       Impact factor: 25.606

Review 4.  Regulation of odorant receptors: one allele at a time.

Authors:  Benjamin M Shykind
Journal:  Hum Mol Genet       Date:  2005-04-15       Impact factor: 6.150

5.  Non-random chromosome positioning in mammalian sperm nuclei, with migration of the sex chromosomes during late spermatogenesis.

Authors:  Helen A Foster; Lalantha R Abeydeera; Darren K Griffin; Joanna M Bridger
Journal:  J Cell Sci       Date:  2005-04-12       Impact factor: 5.285

6.  Interchromosomal interactions and olfactory receptor choice.

Authors:  Stavros Lomvardas; Gilad Barnea; David J Pisapia; Monica Mendelsohn; Jennifer Kirkland; Richard Axel
Journal:  Cell       Date:  2006-07-28       Impact factor: 41.582

7.  Visualizing an olfactory sensory map.

Authors:  P Mombaerts; F Wang; C Dulac; S K Chao; A Nemes; M Mendelsohn; J Edmondson; R Axel
Journal:  Cell       Date:  1996-11-15       Impact factor: 41.582

8.  Spatial segregation of odorant receptor expression in the mammalian olfactory epithelium.

Authors:  R Vassar; J Ngai; R Axel
Journal:  Cell       Date:  1993-07-30       Impact factor: 41.582

9.  Allelic inactivation regulates olfactory receptor gene expression.

Authors:  A Chess; I Simon; H Cedar; R Axel
Journal:  Cell       Date:  1994-09-09       Impact factor: 41.582

10.  Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs.

Authors:  Janet M Young; Ralf M Luche; Barbara J Trask
Journal:  BMC Genomics       Date:  2011-11-15       Impact factor: 3.969

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  24 in total

Review 1.  Viewing Nuclear Architecture through the Eyes of Nocturnal Mammals.

Authors:  Yana Feodorova; Martin Falk; Leonid A Mirny; Irina Solovei
Journal:  Trends Cell Biol       Date:  2020-01-22       Impact factor: 20.808

2.  Nuclear architecture and gene silencing in olfactory sensory neurons.

Authors:  Lucia M Armelin-Correa; Maíra H Nagai; Artur G Leme Silva; Bettina Malnic
Journal:  Bioarchitecture       Date:  2014

Review 3.  Histone and DNA Modifications as Regulators of Neuronal Development and Function.

Authors:  Stavros Lomvardas; Tom Maniatis
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-07-01       Impact factor: 10.005

4.  Olfactory receptor genes expressed in distinct lineages are sequestered in different nuclear compartments.

Authors:  Kyoung-Hye Yoon; Tobias Ragoczy; Zhonghua Lu; Kunio Kondoh; Donghui Kuang; Mark Groudine; Linda B Buck
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

Review 5.  Monoallelic expression of olfactory receptors.

Authors:  Kevin Monahan; Stavros Lomvardas
Journal:  Annu Rev Cell Dev Biol       Date:  2015-09-10       Impact factor: 13.827

Review 6.  Three-dimensional chromosome architecture and drug addiction.

Authors:  Javed M Chitaman; Peter Fraser; Jian Feng
Journal:  Curr Opin Neurobiol       Date:  2019-07-02       Impact factor: 6.627

7.  Enhancer interaction networks as a means for singular olfactory receptor expression.

Authors:  Eirene Markenscoff-Papadimitriou; William E Allen; Bradley M Colquitt; Tracie Goh; Karl K Murphy; Kevin Monahan; Colleen P Mosley; Nadav Ahituv; Stavros Lomvardas
Journal:  Cell       Date:  2014-10-23       Impact factor: 41.582

8.  Odorant Receptor Gene Choice.

Authors:  Timothy S McClintock
Journal:  ChemoSense       Date:  2015-03

9.  Lysine-specific demethylase-1 (LSD1) is compartmentalized at nuclear chromocenters in early post-mitotic cells of the olfactory sensory neuronal lineage.

Authors:  Seda Kilinc; Alyssa Savarino; Julie H Coleman; James E Schwob; Robert P Lane
Journal:  Mol Cell Neurosci       Date:  2016-03-04       Impact factor: 4.314

Review 10.  Olfactory receptor genes make the case for inter-chromosomal interactions.

Authors:  Elizaveta Bashkirova; Stavros Lomvardas
Journal:  Curr Opin Genet Dev       Date:  2019-09-03       Impact factor: 5.578

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