Literature DB >> 27371659

Histone and DNA Modifications as Regulators of Neuronal Development and Function.

Stavros Lomvardas1, Tom Maniatis1.   

Abstract

DNA and histone modifications, together with constraints imposed by nuclear architecture, contribute to the transcriptional regulatory landscape of the nervous system. Here, we provide select examples showing how these regulatory layers, often referred to as epigenetic, contribute to neuronal differentiation and function. We describe the interplay between DNA methylation and Polycomb-mediated repression during neuronal differentiation, the role of DNA methylation and long-range enhancer-promoter interactions in Protocadherin promoter choice, and the contribution of heterochromatic silencing and nuclear organization in singular olfactory receptor expression. Finally, we explain how the activity-dependent expression of a histone variant determines the longevity of olfactory sensory neurons.
Copyright © 2016 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2016        PMID: 27371659      PMCID: PMC4930923          DOI: 10.1101/cshperspect.a024208

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  125 in total

Review 1.  Long-Range Chromatin Interactions.

Authors:  Job Dekker; Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-10-01       Impact factor: 10.005

Review 2.  Singular expression of olfactory receptor genes.

Authors:  Ivan Rodriguez
Journal:  Cell       Date:  2013-10-10       Impact factor: 41.582

3.  Protocadherin clusters and cell adhesion kinase regulate dendrite complexity through Rho GTPase.

Authors:  Lun Suo; Huinan Lu; Guoxin Ying; Mario R Capecchi; Qiang Wu
Journal:  J Mol Cell Biol       Date:  2012-06-21       Impact factor: 6.216

4.  Spatial segregation of odorant receptor expression in the mammalian olfactory epithelium.

Authors:  R Vassar; J Ngai; R Axel
Journal:  Cell       Date:  1993-07-30       Impact factor: 41.582

5.  The OMP-lacZ transgene mimics the unusual expression pattern of OR-Z6, a new odorant receptor gene on mouse chromosome 6: implication for locus-dependent gene expression.

Authors:  M Pyrski; Z Xu; E Walters; D J Gilbert; N A Jenkins; N G Copeland; F L Margolis
Journal:  J Neurosci       Date:  2001-07-01       Impact factor: 6.167

6.  A neuronal identity code for the odorant receptor-specific and activity-dependent axon sorting.

Authors:  Shou Serizawa; Kazunari Miyamichi; Haruki Takeuchi; Yuya Yamagishi; Misao Suzuki; Hitoshi Sakano
Journal:  Cell       Date:  2006-12-01       Impact factor: 41.582

7.  Single-cell identity generated by combinatorial homophilic interactions between α, β, and γ protocadherins.

Authors:  Chan Aye Thu; Weisheng V Chen; Rotem Rubinstein; Maxime Chevee; Holly N Wolcott; Klara O Felsovalyi; Juan Carlos Tapia; Lawrence Shapiro; Barry Honig; Tom Maniatis
Journal:  Cell       Date:  2014-08-28       Impact factor: 41.582

Review 8.  Epigenetic mechanisms of drug addiction.

Authors:  Eric J Nestler
Journal:  Neuropharmacology       Date:  2013-04-30       Impact factor: 5.250

9.  CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons.

Authors:  Teruyoshi Hirayama; Etsuko Tarusawa; Yumiko Yoshimura; Niels Galjart; Takeshi Yagi
Journal:  Cell Rep       Date:  2012-07-26       Impact factor: 9.423

10.  The activity-dependent histone variant H2BE modulates the life span of olfactory neurons.

Authors:  Stephen W Santoro; Catherine Dulac
Journal:  Elife       Date:  2012-12-13       Impact factor: 8.140

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  19 in total

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Journal:  Ann N Y Acad Sci       Date:  2018-01-24       Impact factor: 5.691

2.  Alternative RNA Splicing Associated With Mammalian Neuronal Differentiation.

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Journal:  Cereb Cortex       Date:  2018-08-01       Impact factor: 5.357

3.  Dynamics of RNA Polymerase II Pausing and Bivalent Histone H3 Methylation during Neuronal Differentiation in Brain Development.

Authors:  Jiancheng Liu; Xiwei Wu; Heying Zhang; Gerd P Pfeifer; Qiang Lu
Journal:  Cell Rep       Date:  2017-08-08       Impact factor: 9.423

Review 4.  Early-life adversity and neurological disease: age-old questions and novel answers.

Authors:  Annabel K Short; Tallie Z Baram
Journal:  Nat Rev Neurol       Date:  2019-09-17       Impact factor: 42.937

Review 5.  New subtypes of allele-specific epigenetic effects: implications for brain development, function and disease.

Authors:  Stephanie N Kravitz; Christopher Gregg
Journal:  Curr Opin Neurobiol       Date:  2019-05-30       Impact factor: 7.070

6.  A de novo splice site mutation in EHMT1 resulting in Kleefstra syndrome with pharmacogenomics screening and behavior therapy for regressive behaviors.

Authors:  Amit Kumar Mitra; Jessica Dodge; Jody Van Ness; Israel Sokeye; Brian Van Ness
Journal:  Mol Genet Genomic Med       Date:  2016-12-26       Impact factor: 2.183

7.  Regulatory role of G9a and LSD1 in the Transcription of Olfactory Receptors during Leukaemia Cell Differentiation.

Authors:  Hyeonsoo Jung; Yun-Cheol Chae; Ji-Young Kim; Oh-Seok Jeong; Hoon Kook; Sang-Beom Seo
Journal:  Sci Rep       Date:  2017-04-07       Impact factor: 4.379

8.  Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons.

Authors:  Daria Bunina; Nade Abazova; Nichole Diaz; Kyung-Min Noh; Jeroen Krijgsveld; Judith B Zaugg
Journal:  Cell Syst       Date:  2020-06-17       Impact factor: 10.304

9.  Clustered protocadherins methylation alterations in cancer.

Authors:  Ana Florencia Vega-Benedetti; Eleonora Loi; Loredana Moi; Sylvain Blois; Antonio Fadda; Manila Antonelli; Antonella Arcella; Manuela Badiali; Felice Giangaspero; Isabella Morra; Amedeo Columbano; Angelo Restivo; Luigi Zorcolo; Viviana Gismondi; Liliana Varesco; Sara Erika Bellomo; Silvia Giordano; Matteo Canale; Andrea Casadei-Gardini; Luca Faloppi; Marco Puzzoni; Mario Scartozzi; Pina Ziranu; Giuseppina Cabras; Pierluigi Cocco; Maria Grazia Ennas; Giannina Satta; Mariagrazia Zucca; Daniele Canzio; Patrizia Zavattari
Journal:  Clin Epigenetics       Date:  2019-07-09       Impact factor: 6.551

10.  Coordination of two enhancers drives expression of olfactory trace amine-associated receptors.

Authors:  Aimei Fei; Wanqing Wu; Longzhi Tan; Cheng Tang; Zhengrong Xu; Xiaona Huo; Hongqiang Bao; Yalei Kong; Mark Johnson; Griffin Hartmann; Mustafa Talay; Cheng Yang; Clemens Riegler; Kristian J Herrera; Florian Engert; X Sunney Xie; Gilad Barnea; Stephen D Liberles; Hui Yang; Qian Li
Journal:  Nat Commun       Date:  2021-06-18       Impact factor: 14.919

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