Literature DB >> 26947098

Lysine-specific demethylase-1 (LSD1) is compartmentalized at nuclear chromocenters in early post-mitotic cells of the olfactory sensory neuronal lineage.

Seda Kilinc1, Alyssa Savarino2, Julie H Coleman3, James E Schwob3, Robert P Lane4.   

Abstract

Mammalian olfaction depends on the development of specialized olfactory sensory neurons (OSNs) that each express one odorant receptor (OR) protein from a large family of OR genes encoded in the genome. The lysine-specific demethylase-1 (LSD1) protein removes activating H3K4 or silencing H3K9 methylation marks at gene promoters and is required for proper OR regulation. We show that LSD1 protein exhibits variable organization within nuclei of developing OSNs, and tends to consolidate into a single dominant compartment at the edges of chromocenters within nuclei of early post-mitotic cells of the mouse olfactory epithelium (MOE). Using an immortalized cell line derived from developing olfactory placode, we show that consolidation of LSD1 appears to be cell-cycle regulated, with a peak occurrence in early G1. LSD1 co-compartmentalizes with CoREST, a protein known to collaborate with LSD1 to carry out a variety of chromatin-modifying functions. We show that LSD1 compartments co-localize with 1-3 OR loci at the exclusion of most OR genes, and commonly associate with Lhx2, a transcription factor involved in OR regulation. Together, our data suggests that LSD1 is sequestered into a distinct nuclear space that might restrict a histone-modifying function to a narrow developmental time window and/or range of OR gene targets.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Chromocenters; Compartmentalization; H3K9 methylation; LSD1/KDM1A; Neurogenin; Olfactory receptor genes; p27(Kip1)

Mesh:

Substances:

Year:  2016        PMID: 26947098      PMCID: PMC4935602          DOI: 10.1016/j.mcn.2016.03.001

Source DB:  PubMed          Journal:  Mol Cell Neurosci        ISSN: 1044-7431            Impact factor:   4.314


  56 in total

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Authors:  Robert Schneider; Rudolf Grosschedl
Journal:  Genes Dev       Date:  2007-12-01       Impact factor: 11.361

2.  Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors.

Authors:  Ivan Garcia-Bassets; Young-Soo Kwon; Francesca Telese; Gratien G Prefontaine; Kasey R Hutt; Christine S Cheng; Bong-Gun Ju; Kenneth A Ohgi; Jianxun Wang; Laure Escoubet-Lozach; David W Rose; Christopher K Glass; Xiang-Dong Fu; Michael G Rosenfeld
Journal:  Cell       Date:  2007-02-09       Impact factor: 41.582

3.  Odorant receptors govern the formation of a precise topographic map.

Authors:  F Wang; A Nemes; M Mendelsohn; R Axel
Journal:  Cell       Date:  1998-04-03       Impact factor: 41.582

4.  Odorant receptors regulate the final glomerular coalescence of olfactory sensory neuron axons.

Authors:  Diego J Rodriguez-Gil; Dianna L Bartel; Austin W Jaspers; Arie S Mobley; Fumiaki Imamura; Charles A Greer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

5.  Mutually exclusive expression of odorant receptor transgenes.

Authors:  S Serizawa; T Ishii; H Nakatani; A Tsuboi; F Nagawa; M Asano; K Sudo; J Sakagami; H Sakano; T Ijiri; Y Matsuda; M Suzuki; T Yamamori; Y Iwakura; H Sakano
Journal:  Nat Neurosci       Date:  2000-07       Impact factor: 24.884

6.  An epigenetic trap stabilizes singular olfactory receptor expression.

Authors:  David B Lyons; William E Allen; Tracie Goh; Lulu Tsai; Gilad Barnea; Stavros Lomvardas
Journal:  Cell       Date:  2013-07-18       Impact factor: 41.582

7.  The LIM-homeodomain protein Lhx2 is required for complete development of mouse olfactory sensory neurons.

Authors:  Junji Hirota; Peter Mombaerts
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-01       Impact factor: 11.205

8.  Odorant receptor (OR) gene choice is biased and non-clonal in two olfactory placode cell lines, and OR RNA is nuclear prior to differentiation of these lines.

Authors:  Nidhi Pathak; Paul Johnson; Michael Getman; Robert P Lane
Journal:  J Neurochem       Date:  2008-11-12       Impact factor: 5.372

9.  Odorant receptor expression as a function of neuronal maturity in the adult rodent olfactory system.

Authors:  Carrie L Iwema; James E Schwob
Journal:  J Comp Neurol       Date:  2003-05-05       Impact factor: 3.215

10.  Active genes dynamically colocalize to shared sites of ongoing transcription.

Authors:  Cameron S Osborne; Lyubomira Chakalova; Karen E Brown; David Carter; Alice Horton; Emmanuel Debrand; Beatriz Goyenechea; Jennifer A Mitchell; Susana Lopes; Wolf Reik; Peter Fraser
Journal:  Nat Genet       Date:  2004-09-07       Impact factor: 38.330

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  7 in total

1.  Dissecting LSD1-Dependent Neuronal Maturation in the Olfactory Epithelium.

Authors:  Julie H Coleman; Brian Lin; James E Schwob
Journal:  J Comp Neurol       Date:  2017-06-29       Impact factor: 3.215

Review 2.  Transcriptional and Epigenetic Control of Mammalian Olfactory Epithelium Development.

Authors:  Godwin Sokpor; Eman Abbas; Joachim Rosenbusch; Jochen F Staiger; Tran Tuoc
Journal:  Mol Neurobiol       Date:  2018-03-12       Impact factor: 5.590

3.  Olfactory receptor coding sequences cause silencing of episomal constructs in multiple cell lines.

Authors:  Ghazia Abbas; Spencer Tang; Joyce Noble; Robert P Lane
Journal:  Mol Cell Neurosci       Date:  2021-11-04       Impact factor: 4.314

4.  Olfactory receptor accessory proteins play crucial roles in receptor function and gene choice.

Authors:  Ruchira Sharma; Yoshiro Ishimaru; Ian Davison; Kentaro Ikegami; Ming-Shan Chien; Helena You; Quiyi Chi; Momoka Kubota; Masafumi Yohda; Michael Ehlers; Hiroaki Matsunami
Journal:  Elife       Date:  2017-03-06       Impact factor: 8.140

5.  Pseudotime analysis reveals novel regulatory factors for multigenic onset and monogenic transition of odorant receptor expression.

Authors:  Sigrun I Korsching; Achim Tresch; Mohammad Hussainy
Journal:  Sci Rep       Date:  2022-09-28       Impact factor: 4.996

6.  Rearrangement of Actin Microfilaments in the Development of Olfactory Receptor Cells in Fish.

Authors:  Igor V Klimenkov; Nikolay P Sudakov; Mikhail V Pastukhov; Mikhail M Svinov; Nikolay S Kositsyn
Journal:  Sci Rep       Date:  2018-02-27       Impact factor: 4.379

7.  Frequent and biased odorant receptor (OR) re-selection in an olfactory placode-derived cell line.

Authors:  J C Noble; Diane Meredith; Robert P Lane
Journal:  PLoS One       Date:  2018-09-26       Impact factor: 3.240

  7 in total

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