Literature DB >> 24550265

Molecular assessment of surgical-resection margins of gastric cancer by mass-spectrometric imaging.

Livia S Eberlin1, Robert J Tibshirani, Jialing Zhang, Teri A Longacre, Gerald J Berry, David B Bingham, Jeffrey A Norton, Richard N Zare, George A Poultsides.   

Abstract

Surgical resection is the main curative option for gastrointestinal cancers. The extent of cancer resection is commonly assessed during surgery by pathologic evaluation of (frozen sections of) the tissue at the resected specimen margin(s) to verify whether cancer is present. We compare this method to an alternative procedure, desorption electrospray ionization mass spectrometric imaging (DESI-MSI), for 62 banked human cancerous and normal gastric-tissue samples. In DESI-MSI, microdroplets strike the tissue sample, the resulting splash enters a mass spectrometer, and a statistical analysis, here, the Lasso method (which stands for least absolute shrinkage and selection operator and which is a multiclass logistic regression with L1 penalty), is applied to classify tissues based on the molecular information obtained directly from DESI-MSI. The methodology developed with 28 frozen training samples of clear histopathologic diagnosis showed an overall accuracy value of 98% for the 12,480 pixels evaluated in cross-validation (CV), and 97% when a completely independent set of samples was tested. By applying an additional spatial smoothing technique, the accuracy for both CV and the independent set of samples was 99% compared with histological diagnoses. To test our method for clinical use, we applied it to a total of 21 tissue-margin samples prospectively obtained from nine gastric-cancer patients. The results obtained suggest that DESI-MSI/Lasso may be valuable for routine intraoperative assessment of the specimen margins during gastric-cancer surgery.

Entities:  

Keywords:  biostatistics; intraoperative diagnosis; mass spectrometry imaging; surgical margins

Mesh:

Year:  2014        PMID: 24550265      PMCID: PMC3932851          DOI: 10.1073/pnas.1400274111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Journal:  Mol Cell Biochem       Date:  2005-08       Impact factor: 3.396

5.  Prognostic predictors of patients with carcinoma of the gastric cardia.

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Journal:  Hepatogastroenterology       Date:  2012-05

6.  Intraoperative frozen section margin evaluation in gastric cancer of the cardia surgery.

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Journal:  Hepatogastroenterology       Date:  2006 Nov-Dec

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8.  Intraoperative tissue identification using rapid evaporative ionization mass spectrometry.

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9.  Frozen section and permanent diagnoses of the bile duct margin in gallbladder and bile duct cancer.

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Review 10.  MALDI imaging mass spectrometry: statistical data analysis and current computational challenges.

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  68 in total

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Journal:  Gastric Cancer       Date:  2015-07-28       Impact factor: 7.370

Review 2.  Lipids and cancer: Emerging roles in pathogenesis, diagnosis and therapeutic intervention.

Authors:  Lisa M Butler; Ylenia Perone; Jonas Dehairs; Leslie E Lupien; Vincent de Laat; Ali Talebi; Massimo Loda; William B Kinlaw; Johannes V Swinnen
Journal:  Adv Drug Deliv Rev       Date:  2020-07-23       Impact factor: 15.470

3.  Oral squamous cell carcinoma diagnosed from saliva metabolic profiling.

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Review 4.  Image-Guided Tumor Resection.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-30       Impact factor: 11.205

6.  An Assessment of the Utility of Tissue Smears in Rapid Cancer Profiling with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS).

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7.  DESI-MSI and METASPACE indicates lipid abnormalities and altered mitochondrial membrane components in diabetic renal proximal tubules.

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8.  Intraoperative mass spectrometry of tumor metabolites.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-15       Impact factor: 11.205

9.  Inner workings: Spraying to see cancer cells.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-10       Impact factor: 11.205

10.  Alteration of the lipid profile in lymphomas induced by MYC overexpression.

Authors:  Livia S Eberlin; Meital Gabay; Alice C Fan; Arvin M Gouw; Robert J Tibshirani; Dean W Felsher; Richard N Zare
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-03       Impact factor: 11.205

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