| Literature DB >> 24526995 |
Shaaban K Mohamed1, Mehmet Akkurt2, Benson M Kariuki3, Ali M Ali4, Mustafa R Albayati5.
Abstract
The mol-ecular conformation of title compound, C12H11N3S, is almost planar [maximum deviation = 0.063 (2) Å]; an intra-molecular C-H⋯N hydrogen bond is noted. In the crystal, mol-ecules inter-act with each other via π-π stacking inter-actions between thia-zole rings [centroid-centroid distance = 3.7475 (9) Å] and methyl-H⋯π(C6) inter-actions, forming columns along the a axis.Entities:
Year: 2013 PMID: 24526995 PMCID: PMC3914091 DOI: 10.1107/S1600536813033266
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H11N3S | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 1971 reflections |
| θ = 4.4–72.7° | |
| µ = 2.32 mm−1 | |
| β = 112.947 (4)° | Block, purple |
| 0.26 × 0.20 × 0.09 mm | |
| Oxford Diffraction SuperNova (Dual, Cu at zero, Atlas) diffractometer | 2195 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 1971 reflections with |
| Mirror monochromator | |
| ω scans | θmax = 72.7°, θmin = 4.4° |
| Absorption correction: multi-scan ( | |
| 4062 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2195 reflections | (Δ/σ)max = 0.002 |
| 147 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| S1 | 0.11365 (6) | 0.50492 (2) | 0.23607 (5) | 0.0475 (1) | |
| N1 | 0.24456 (18) | 0.46002 (6) | 0.55620 (16) | 0.0427 (4) | |
| N2 | 0.3152 (3) | 0.66200 (8) | 0.3024 (2) | 0.0704 (6) | |
| N3 | 0.5370 (2) | 0.62896 (8) | 0.81666 (18) | 0.0544 (4) | |
| C1 | 0.0527 (2) | 0.42447 (7) | 0.26748 (18) | 0.0417 (4) | |
| C2 | 0.1371 (2) | 0.40931 (7) | 0.44773 (19) | 0.0403 (4) | |
| C3 | 0.1078 (2) | 0.34624 (8) | 0.5022 (2) | 0.0491 (5) | |
| C4 | −0.0040 (3) | 0.30080 (8) | 0.3794 (2) | 0.0518 (5) | |
| C5 | −0.0886 (2) | 0.31692 (9) | 0.2020 (2) | 0.0516 (5) | |
| C6 | −0.0608 (2) | 0.37875 (9) | 0.1440 (2) | 0.0501 (5) | |
| C7 | 0.2450 (2) | 0.51233 (7) | 0.46445 (18) | 0.0388 (4) | |
| C8 | 0.3437 (2) | 0.57454 (7) | 0.53589 (19) | 0.0411 (4) | |
| C9 | 0.4385 (2) | 0.57944 (8) | 0.7160 (2) | 0.0459 (5) | |
| C10 | 0.5596 (3) | 0.69358 (10) | 0.7510 (3) | 0.0643 (6) | |
| C11 | 0.6221 (4) | 0.62098 (14) | 1.0073 (3) | 0.0817 (8) | |
| C12 | 0.3318 (2) | 0.62455 (8) | 0.4120 (2) | 0.0491 (5) | |
| H3 | 0.16340 | 0.33490 | 0.62050 | 0.0590* | |
| H4 | −0.02320 | 0.25870 | 0.41570 | 0.0620* | |
| H5 | −0.16480 | 0.28570 | 0.12150 | 0.0620* | |
| H6 | −0.11670 | 0.38950 | 0.02530 | 0.0600* | |
| H9 | 0.43210 | 0.54140 | 0.77700 | 0.0550* | |
| H10A | 0.62640 | 0.68910 | 0.67250 | 0.0960* | |
| H10B | 0.63510 | 0.72160 | 0.84750 | 0.0960* | |
| H10C | 0.43220 | 0.71290 | 0.68920 | 0.0960* | |
| H11A | 0.60670 | 0.57590 | 1.03660 | 0.1230* | |
| H11B | 0.55600 | 0.64990 | 1.05890 | 0.1230* | |
| H11C | 0.75950 | 0.63200 | 1.05180 | 0.1230* |
| S1 | 0.0628 (3) | 0.0411 (2) | 0.0349 (2) | −0.0012 (2) | 0.0150 (2) | 0.0049 (1) |
| N1 | 0.0501 (7) | 0.0382 (6) | 0.0408 (6) | 0.0023 (5) | 0.0188 (5) | 0.0008 (5) |
| N2 | 0.0975 (13) | 0.0468 (8) | 0.0584 (9) | −0.0053 (8) | 0.0213 (8) | 0.0088 (7) |
| N3 | 0.0544 (7) | 0.0575 (8) | 0.0464 (7) | −0.0001 (6) | 0.0144 (6) | −0.0116 (6) |
| C1 | 0.0489 (7) | 0.0408 (7) | 0.0378 (7) | 0.0023 (6) | 0.0194 (6) | 0.0037 (6) |
| C2 | 0.0457 (7) | 0.0413 (7) | 0.0365 (7) | 0.0036 (6) | 0.0189 (6) | 0.0014 (5) |
| C3 | 0.0618 (9) | 0.0453 (8) | 0.0428 (8) | 0.0007 (7) | 0.0231 (7) | 0.0065 (6) |
| C4 | 0.0642 (9) | 0.0417 (8) | 0.0567 (9) | −0.0033 (7) | 0.0315 (7) | 0.0019 (7) |
| C5 | 0.0575 (9) | 0.0502 (8) | 0.0518 (9) | −0.0093 (7) | 0.0263 (7) | −0.0104 (7) |
| C6 | 0.0576 (9) | 0.0546 (9) | 0.0377 (7) | −0.0041 (7) | 0.0180 (6) | −0.0027 (6) |
| C7 | 0.0443 (7) | 0.0394 (7) | 0.0336 (7) | 0.0066 (5) | 0.0162 (6) | 0.0018 (5) |
| C8 | 0.0457 (7) | 0.0369 (7) | 0.0412 (7) | 0.0041 (6) | 0.0175 (6) | −0.0008 (6) |
| C9 | 0.0486 (8) | 0.0454 (8) | 0.0432 (8) | 0.0039 (6) | 0.0173 (6) | −0.0026 (6) |
| C10 | 0.0652 (10) | 0.0537 (10) | 0.0699 (11) | −0.0082 (8) | 0.0219 (9) | −0.0178 (9) |
| C11 | 0.0848 (15) | 0.0984 (17) | 0.0464 (10) | −0.0053 (13) | 0.0087 (9) | −0.0160 (11) |
| C12 | 0.0570 (9) | 0.0379 (7) | 0.0485 (8) | 0.0002 (6) | 0.0165 (7) | −0.0029 (6) |
| S1—C1 | 1.7311 (15) | C7—C8 | 1.456 (2) |
| S1—C7 | 1.7612 (14) | C8—C9 | 1.380 (2) |
| N1—C2 | 1.3878 (19) | C8—C12 | 1.416 (2) |
| N1—C7 | 1.3008 (19) | C3—H3 | 0.9300 |
| N2—C12 | 1.150 (2) | C4—H4 | 0.9300 |
| N3—C9 | 1.322 (2) | C5—H5 | 0.9300 |
| N3—C10 | 1.447 (3) | C6—H6 | 0.9300 |
| N3—C11 | 1.461 (3) | C9—H9 | 0.9300 |
| C1—C2 | 1.407 (2) | C10—H10A | 0.9600 |
| C1—C6 | 1.389 (2) | C10—H10B | 0.9600 |
| C2—C3 | 1.395 (2) | C10—H10C | 0.9600 |
| C3—C4 | 1.378 (2) | C11—H11A | 0.9600 |
| C4—C5 | 1.391 (2) | C11—H11B | 0.9600 |
| C5—C6 | 1.381 (3) | C11—H11C | 0.9600 |
| C1—S1—C7 | 89.15 (7) | C2—C3—H3 | 120.00 |
| C2—N1—C7 | 110.61 (12) | C4—C3—H3 | 120.00 |
| C9—N3—C10 | 124.08 (15) | C3—C4—H4 | 120.00 |
| C9—N3—C11 | 119.72 (17) | C5—C4—H4 | 119.00 |
| C10—N3—C11 | 116.13 (18) | C4—C5—H5 | 120.00 |
| S1—C1—C2 | 109.23 (10) | C6—C5—H5 | 120.00 |
| S1—C1—C6 | 129.06 (12) | C1—C6—H6 | 121.00 |
| C2—C1—C6 | 121.71 (14) | C5—C6—H6 | 121.00 |
| N1—C2—C1 | 115.46 (13) | N3—C9—H9 | 114.00 |
| N1—C2—C3 | 125.84 (13) | C8—C9—H9 | 115.00 |
| C1—C2—C3 | 118.70 (13) | N3—C10—H10A | 109.00 |
| C2—C3—C4 | 119.52 (14) | N3—C10—H10B | 109.00 |
| C3—C4—C5 | 121.02 (16) | N3—C10—H10C | 109.00 |
| C4—C5—C6 | 120.77 (15) | H10A—C10—H10B | 109.00 |
| C1—C6—C5 | 118.27 (14) | H10A—C10—H10C | 109.00 |
| S1—C7—N1 | 115.55 (11) | H10B—C10—H10C | 110.00 |
| S1—C7—C8 | 119.17 (10) | N3—C11—H11A | 109.00 |
| N1—C7—C8 | 125.28 (13) | N3—C11—H11B | 109.00 |
| C7—C8—C9 | 117.55 (13) | N3—C11—H11C | 109.00 |
| C7—C8—C12 | 116.15 (13) | H11A—C11—H11B | 109.00 |
| C9—C8—C12 | 126.30 (14) | H11A—C11—H11C | 110.00 |
| N3—C9—C8 | 131.03 (15) | H11B—C11—H11C | 109.00 |
| N2—C12—C8 | 175.21 (17) | ||
| C7—S1—C1—C2 | −0.33 (12) | S1—C1—C2—N1 | 0.48 (18) |
| C7—S1—C1—C6 | 179.26 (16) | S1—C1—C2—C3 | −179.33 (12) |
| C1—S1—C7—C8 | −179.85 (13) | N1—C2—C3—C4 | 179.54 (17) |
| C1—S1—C7—N1 | 0.14 (13) | C1—C2—C3—C4 | −0.7 (2) |
| C2—N1—C7—C8 | −179.91 (15) | C2—C3—C4—C5 | −0.2 (3) |
| C7—N1—C2—C3 | 179.41 (16) | C3—C4—C5—C6 | 0.8 (3) |
| C2—N1—C7—S1 | 0.10 (19) | C4—C5—C6—C1 | −0.4 (3) |
| C7—N1—C2—C1 | −0.4 (2) | S1—C7—C8—C12 | −2.3 (2) |
| C11—N3—C9—C8 | 179.2 (2) | N1—C7—C8—C9 | −2.6 (2) |
| C10—N3—C9—C8 | 2.5 (3) | S1—C7—C8—C9 | 177.44 (12) |
| C6—C1—C2—C3 | 1.1 (2) | N1—C7—C8—C12 | 177.71 (15) |
| C6—C1—C2—N1 | −179.15 (15) | C12—C8—C9—N3 | 0.5 (3) |
| S1—C1—C6—C5 | 179.96 (13) | C7—C8—C9—N3 | −179.24 (17) |
| C2—C1—C6—C5 | −0.5 (2) |
| H··· | ||||
| C9—H9···N1 | 0.93 | 2.44 | 2.851 (2) | 106 |
| C10—H10 | 0.96 | 2.77 | 3.549 (2) | 138 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C9—H9⋯N1 | 0.93 | 2.44 | 2.851 (2) | 106 |
| C10—H10 | 0.96 | 2.77 | 3.549 (2) | 138 |
Symmetry code: (i) .