Literature DB >> 24526995

(2E)-2-(1,3-Benzo-thia-zol-2-yl)-3-(di-methyl-amino)-prop-2-ene-nitrile.

Shaaban K Mohamed1, Mehmet Akkurt2, Benson M Kariuki3, Ali M Ali4, Mustafa R Albayati5.   

Abstract

The mol-ecular conformation of title compound, C12H11N3S, is almost planar [maximum deviation = 0.063 (2) Å]; an intra-molecular C-H⋯N hydrogen bond is noted. In the crystal, mol-ecules inter-act with each other via π-π stacking inter-actions between thia-zole rings [centroid-centroid distance = 3.7475 (9) Å] and methyl-H⋯π(C6) inter-actions, forming columns along the a axis.

Entities:  

Year:  2013        PMID: 24526995      PMCID: PMC3914091          DOI: 10.1107/S1600536813033266

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For various biological activities (e.g. anti-tumour, anti-inflammatory, anti-viral, etc.) of benzo­thia­zole compounds, see: Selvam et al. (2011 ▶); Sanja & Cvetkovic (2011 ▶); Alang et al. (2010 ▶); Pal et al. (2011 ▶); Sharma et al. (2010 ▶); El-Shaaer et al. (1997 ▶); Gupta & Raat (2010 ▶); Hutchinson et al. (2002 ▶); Gong et al. (2004 ▶); Hutchinson et al. (2003 ▶); Geronikaki & Theophilidis (1992 ▶); Vicini et al. (1990 ▶); Das et al. (2003 ▶); Klose et al. (1983 ▶); Satsangi et al. (1983 ▶).

Experimental

Crystal data

C12H11N3S M = 229.31 Monoclinic, a = 7.3785 (2) Å b = 20.1801 (4) Å c = 8.2706 (2) Å β = 112.947 (4)° V = 1134.03 (6) Å3 Z = 4 Cu Kα radiation μ = 2.32 mm−1 T = 293 K 0.26 × 0.20 × 0.09 mm

Data collection

Oxford Diffraction SuperNova (Dual, Cu at zero, Atlas) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2013 ▶) T min = 0.584, T max = 0.818 4062 measured reflections 2195 independent reflections 1971 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.107 S = 1.05 2195 reflections 147 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2013 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813033266/tk5279sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813033266/tk5279Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813033266/tk5279Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C12H11N3SF(000) = 480
Mr = 229.31Dx = 1.343 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 1971 reflections
a = 7.3785 (2) Åθ = 4.4–72.7°
b = 20.1801 (4) ŵ = 2.32 mm1
c = 8.2706 (2) ÅT = 293 K
β = 112.947 (4)°Block, purple
V = 1134.03 (6) Å30.26 × 0.20 × 0.09 mm
Z = 4
Oxford Diffraction SuperNova (Dual, Cu at zero, Atlas) diffractometer2195 independent reflections
Radiation source: SuperNova (Cu) X-ray Source1971 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.016
ω scansθmax = 72.7°, θmin = 4.4°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2013)h = −7→9
Tmin = 0.584, Tmax = 0.818k = −16→25
4062 measured reflectionsl = −10→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0678P)2 + 0.1211P] where P = (Fo2 + 2Fc2)/3
2195 reflections(Δ/σ)max = 0.002
147 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.11365 (6)0.50492 (2)0.23607 (5)0.0475 (1)
N10.24456 (18)0.46002 (6)0.55620 (16)0.0427 (4)
N20.3152 (3)0.66200 (8)0.3024 (2)0.0704 (6)
N30.5370 (2)0.62896 (8)0.81666 (18)0.0544 (4)
C10.0527 (2)0.42447 (7)0.26748 (18)0.0417 (4)
C20.1371 (2)0.40931 (7)0.44773 (19)0.0403 (4)
C30.1078 (2)0.34624 (8)0.5022 (2)0.0491 (5)
C4−0.0040 (3)0.30080 (8)0.3794 (2)0.0518 (5)
C5−0.0886 (2)0.31692 (9)0.2020 (2)0.0516 (5)
C6−0.0608 (2)0.37875 (9)0.1440 (2)0.0501 (5)
C70.2450 (2)0.51233 (7)0.46445 (18)0.0388 (4)
C80.3437 (2)0.57454 (7)0.53589 (19)0.0411 (4)
C90.4385 (2)0.57944 (8)0.7160 (2)0.0459 (5)
C100.5596 (3)0.69358 (10)0.7510 (3)0.0643 (6)
C110.6221 (4)0.62098 (14)1.0073 (3)0.0817 (8)
C120.3318 (2)0.62455 (8)0.4120 (2)0.0491 (5)
H30.163400.334900.620500.0590*
H4−0.023200.258700.415700.0620*
H5−0.164800.285700.121500.0620*
H6−0.116700.389500.025300.0600*
H90.432100.541400.777000.0550*
H10A0.626400.689100.672500.0960*
H10B0.635100.721600.847500.0960*
H10C0.432200.712900.689200.0960*
H11A0.606700.575901.036600.1230*
H11B0.556000.649901.058900.1230*
H11C0.759500.632001.051800.1230*
U11U22U33U12U13U23
S10.0628 (3)0.0411 (2)0.0349 (2)−0.0012 (2)0.0150 (2)0.0049 (1)
N10.0501 (7)0.0382 (6)0.0408 (6)0.0023 (5)0.0188 (5)0.0008 (5)
N20.0975 (13)0.0468 (8)0.0584 (9)−0.0053 (8)0.0213 (8)0.0088 (7)
N30.0544 (7)0.0575 (8)0.0464 (7)−0.0001 (6)0.0144 (6)−0.0116 (6)
C10.0489 (7)0.0408 (7)0.0378 (7)0.0023 (6)0.0194 (6)0.0037 (6)
C20.0457 (7)0.0413 (7)0.0365 (7)0.0036 (6)0.0189 (6)0.0014 (5)
C30.0618 (9)0.0453 (8)0.0428 (8)0.0007 (7)0.0231 (7)0.0065 (6)
C40.0642 (9)0.0417 (8)0.0567 (9)−0.0033 (7)0.0315 (7)0.0019 (7)
C50.0575 (9)0.0502 (8)0.0518 (9)−0.0093 (7)0.0263 (7)−0.0104 (7)
C60.0576 (9)0.0546 (9)0.0377 (7)−0.0041 (7)0.0180 (6)−0.0027 (6)
C70.0443 (7)0.0394 (7)0.0336 (7)0.0066 (5)0.0162 (6)0.0018 (5)
C80.0457 (7)0.0369 (7)0.0412 (7)0.0041 (6)0.0175 (6)−0.0008 (6)
C90.0486 (8)0.0454 (8)0.0432 (8)0.0039 (6)0.0173 (6)−0.0026 (6)
C100.0652 (10)0.0537 (10)0.0699 (11)−0.0082 (8)0.0219 (9)−0.0178 (9)
C110.0848 (15)0.0984 (17)0.0464 (10)−0.0053 (13)0.0087 (9)−0.0160 (11)
C120.0570 (9)0.0379 (7)0.0485 (8)0.0002 (6)0.0165 (7)−0.0029 (6)
S1—C11.7311 (15)C7—C81.456 (2)
S1—C71.7612 (14)C8—C91.380 (2)
N1—C21.3878 (19)C8—C121.416 (2)
N1—C71.3008 (19)C3—H30.9300
N2—C121.150 (2)C4—H40.9300
N3—C91.322 (2)C5—H50.9300
N3—C101.447 (3)C6—H60.9300
N3—C111.461 (3)C9—H90.9300
C1—C21.407 (2)C10—H10A0.9600
C1—C61.389 (2)C10—H10B0.9600
C2—C31.395 (2)C10—H10C0.9600
C3—C41.378 (2)C11—H11A0.9600
C4—C51.391 (2)C11—H11B0.9600
C5—C61.381 (3)C11—H11C0.9600
C1—S1—C789.15 (7)C2—C3—H3120.00
C2—N1—C7110.61 (12)C4—C3—H3120.00
C9—N3—C10124.08 (15)C3—C4—H4120.00
C9—N3—C11119.72 (17)C5—C4—H4119.00
C10—N3—C11116.13 (18)C4—C5—H5120.00
S1—C1—C2109.23 (10)C6—C5—H5120.00
S1—C1—C6129.06 (12)C1—C6—H6121.00
C2—C1—C6121.71 (14)C5—C6—H6121.00
N1—C2—C1115.46 (13)N3—C9—H9114.00
N1—C2—C3125.84 (13)C8—C9—H9115.00
C1—C2—C3118.70 (13)N3—C10—H10A109.00
C2—C3—C4119.52 (14)N3—C10—H10B109.00
C3—C4—C5121.02 (16)N3—C10—H10C109.00
C4—C5—C6120.77 (15)H10A—C10—H10B109.00
C1—C6—C5118.27 (14)H10A—C10—H10C109.00
S1—C7—N1115.55 (11)H10B—C10—H10C110.00
S1—C7—C8119.17 (10)N3—C11—H11A109.00
N1—C7—C8125.28 (13)N3—C11—H11B109.00
C7—C8—C9117.55 (13)N3—C11—H11C109.00
C7—C8—C12116.15 (13)H11A—C11—H11B109.00
C9—C8—C12126.30 (14)H11A—C11—H11C110.00
N3—C9—C8131.03 (15)H11B—C11—H11C109.00
N2—C12—C8175.21 (17)
C7—S1—C1—C2−0.33 (12)S1—C1—C2—N10.48 (18)
C7—S1—C1—C6179.26 (16)S1—C1—C2—C3−179.33 (12)
C1—S1—C7—C8−179.85 (13)N1—C2—C3—C4179.54 (17)
C1—S1—C7—N10.14 (13)C1—C2—C3—C4−0.7 (2)
C2—N1—C7—C8−179.91 (15)C2—C3—C4—C5−0.2 (3)
C7—N1—C2—C3179.41 (16)C3—C4—C5—C60.8 (3)
C2—N1—C7—S10.10 (19)C4—C5—C6—C1−0.4 (3)
C7—N1—C2—C1−0.4 (2)S1—C7—C8—C12−2.3 (2)
C11—N3—C9—C8179.2 (2)N1—C7—C8—C9−2.6 (2)
C10—N3—C9—C82.5 (3)S1—C7—C8—C9177.44 (12)
C6—C1—C2—C31.1 (2)N1—C7—C8—C12177.71 (15)
C6—C1—C2—N1−179.15 (15)C12—C8—C9—N30.5 (3)
S1—C1—C6—C5179.96 (13)C7—C8—C9—N3−179.24 (17)
C2—C1—C6—C5−0.5 (2)
D—H···AD—HH···AD···AD—H···A
C9—H9···N10.932.442.851 (2)106
C10—H10A···Cg1i0.962.773.549 (2)138
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C9—H9⋯N10.932.442.851 (2)106
C10—H10ACg1i 0.962.773.549 (2)138

Symmetry code: (i) .

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