| Literature DB >> 24526957 |
Thameur Sahbani1, Wajda Smirani Sta1, Mohamed Rzaigui1.
Abstract
In the title compound, (C5H7N2)2[Ni(H2O)6](SO4)2, the Ni(II) cation is located on an inversion centre and is coordinated by six aqua ligands in a slightly distorted octa-hedral coordination environment. The [Ni(H2O)6](2+) ions are connected through an extensive network of O-H⋯O hydrogen bonds to sulfate anions, leading to the formation of layers parallel to (001). The 4-amino-pyridinium cations are located between these layers and are connected to the anionic framework by N-H⋯O hydrogen bonds. Weak π-π inter-actions between the pyridine rings, with a centroid-centroid distance of 3.754 (9) Å, provide additional stability to the crystal packing.Entities:
Year: 2013 PMID: 24526957 PMCID: PMC3914041 DOI: 10.1107/S1600536813032558
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H7N2)2[Ni(H2O)6](SO4)2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Ag |
| Cell parameters from 25 reflections | |
| θ = 9–11° | |
| µ = 0.64 mm−1 | |
| α = 100.61 (3)° | |
| β = 99.26 (2)° | Block, blue |
| γ = 99.57 (2)° | 0.30 × 0.20 × 0.20 mm |
| Enraf–Nonius TurboCAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 28.0°, θmin = 2.4° |
| Graphite monochromator | |
| ω scans | |
| 5919 measured reflections | |
| 5022 independent reflections | 2 standard reflections every 120 min |
| 3986 reflections with | intensity decay: 5% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5022 reflections | (Δ/σ)max = 0.001 |
| 174 parameters | Δρmax = 0.75 e Å−3 |
| 6 restraints | Δρmin = −1.06 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Ni1 | 0.0000 | 0.0000 | 0.0000 | 0.01654 (6) | |
| O1 | 0.15341 (17) | −0.21342 (15) | −0.07350 (9) | 0.02370 (18) | |
| O2 | 0.28416 (17) | 0.11424 (15) | 0.12233 (10) | 0.0257 (2) | |
| O3 | 0.10291 (17) | 0.16756 (15) | −0.10704 (9) | 0.02297 (18) | |
| C1 | 0.9486 (2) | −0.2906 (2) | 0.45752 (12) | 0.0243 (2) | |
| N2 | 0.9660 (3) | −0.1384 (2) | 0.68016 (12) | 0.0418 (4) | |
| H1 | 0.9714 | −0.0903 | 0.7496 | 0.050* | |
| C3 | 0.7706 (3) | −0.2354 (3) | 0.61472 (15) | 0.0395 (4) | |
| H3 | 0.6434 | −0.2507 | 0.6454 | 0.047* | |
| C5 | 1.1512 (3) | −0.1901 (2) | 0.53005 (15) | 0.0316 (3) | |
| H5 | 1.2830 | −0.1752 | 0.5032 | 0.038* | |
| C4 | 1.1524 (3) | −0.1156 (3) | 0.63905 (16) | 0.0389 (4) | |
| H4 | 1.2856 | −0.0473 | 0.6861 | 0.047* | |
| N1 | 0.9396 (3) | −0.3609 (3) | 0.35006 (12) | 0.0338 (3) | |
| C2 | 0.7559 (3) | −0.3115 (3) | 0.50454 (13) | 0.0305 (3) | |
| H2 | 0.6191 | −0.3773 | 0.4601 | 0.037* | |
| H103 | 0.056 (4) | 0.261 (3) | −0.1106 (18) | 0.030 (5)* | |
| H203 | 0.236 (3) | 0.205 (3) | −0.1029 (16) | 0.023 (4)* | |
| H7 | 1.061 (5) | −0.333 (4) | 0.327 (2) | 0.062 (8)* | |
| H6 | 0.827 (5) | −0.410 (4) | 0.307 (2) | 0.048 (7)* | |
| S1 | 0.62063 (5) | 0.35433 (4) | 0.81367 (3) | 0.02033 (7) | |
| O5 | 0.85539 (16) | 0.44487 (16) | 0.86606 (11) | 0.0306 (2) | |
| O7 | 0.53371 (17) | 0.21768 (17) | 0.88249 (10) | 0.0295 (2) | |
| O4 | 0.48753 (19) | 0.50858 (17) | 0.81131 (13) | 0.0354 (3) | |
| O6 | 0.6085 (2) | 0.2407 (2) | 0.70136 (11) | 0.0420 (3) | |
| H1O1 | 0.257 (3) | −0.228 (3) | −0.0278 (18) | 0.047 (7)* | |
| H2O1 | 0.065 (4) | −0.327 (3) | −0.098 (2) | 0.059 (8)* | |
| H1O2 | 0.363 (4) | 0.225 (2) | 0.129 (2) | 0.047 (7)* | |
| H2O2 | 0.367 (3) | 0.034 (3) | 0.1328 (19) | 0.032 (5)* |
| Ni1 | 0.01578 (10) | 0.01730 (10) | 0.01684 (10) | 0.00301 (7) | 0.00362 (7) | 0.00442 (7) |
| O1 | 0.0239 (4) | 0.0213 (4) | 0.0263 (5) | 0.0059 (3) | 0.0053 (4) | 0.0045 (4) |
| O2 | 0.0219 (4) | 0.0216 (4) | 0.0301 (5) | 0.0031 (3) | −0.0012 (4) | 0.0038 (4) |
| O3 | 0.0195 (4) | 0.0242 (4) | 0.0287 (5) | 0.0051 (3) | 0.0078 (4) | 0.0113 (4) |
| C1 | 0.0253 (6) | 0.0268 (6) | 0.0222 (6) | 0.0068 (5) | 0.0044 (5) | 0.0081 (5) |
| N2 | 0.0545 (10) | 0.0452 (8) | 0.0222 (6) | 0.0137 (7) | 0.0035 (6) | −0.0014 (6) |
| C3 | 0.0401 (9) | 0.0538 (10) | 0.0278 (7) | 0.0136 (8) | 0.0131 (7) | 0.0080 (7) |
| C5 | 0.0255 (6) | 0.0327 (7) | 0.0340 (7) | 0.0020 (5) | 0.0014 (6) | 0.0079 (6) |
| C4 | 0.0395 (8) | 0.0317 (8) | 0.0358 (8) | 0.0025 (6) | −0.0064 (7) | −0.0006 (6) |
| N1 | 0.0303 (6) | 0.0498 (8) | 0.0217 (6) | 0.0093 (6) | 0.0061 (5) | 0.0071 (6) |
| C2 | 0.0256 (6) | 0.0398 (8) | 0.0253 (6) | 0.0043 (6) | 0.0061 (5) | 0.0064 (6) |
| S1 | 0.01526 (12) | 0.02018 (13) | 0.02486 (15) | 0.00201 (10) | 0.00201 (10) | 0.00623 (11) |
| O5 | 0.0164 (4) | 0.0257 (5) | 0.0454 (7) | −0.0001 (3) | −0.0019 (4) | 0.0076 (5) |
| O7 | 0.0222 (4) | 0.0331 (5) | 0.0390 (6) | 0.0067 (4) | 0.0098 (4) | 0.0184 (5) |
| O4 | 0.0231 (5) | 0.0246 (5) | 0.0571 (8) | 0.0068 (4) | −0.0024 (5) | 0.0124 (5) |
| O6 | 0.0400 (7) | 0.0518 (8) | 0.0275 (6) | 0.0023 (6) | 0.0070 (5) | −0.0019 (5) |
| Ni1—O3i | 2.0388 (11) | N2—C4 | 1.336 (3) |
| Ni1—O3 | 2.0388 (11) | N2—C3 | 1.342 (3) |
| Ni1—O1 | 2.0578 (12) | N2—H1 | 0.8600 |
| Ni1—O1i | 2.0578 (12) | C3—C2 | 1.357 (2) |
| Ni1—O2i | 2.0701 (12) | C3—H3 | 0.9300 |
| Ni1—O2 | 2.0701 (12) | C5—C4 | 1.357 (3) |
| O1—H1O1 | 0.818 (15) | C5—H5 | 0.9300 |
| O1—H2O1 | 0.860 (15) | C4—H4 | 0.9300 |
| O2—H1O2 | 0.828 (15) | N1—H7 | 0.85 (3) |
| O2—H2O2 | 0.839 (14) | N1—H6 | 0.79 (3) |
| O3—H103 | 0.77 (2) | C2—H2 | 0.9300 |
| O3—H203 | 0.82 (2) | S1—O6 | 1.4574 (14) |
| C1—N1 | 1.324 (2) | S1—O4 | 1.4686 (12) |
| C1—C2 | 1.412 (2) | S1—O5 | 1.4793 (12) |
| C1—C5 | 1.413 (2) | S1—O7 | 1.4897 (12) |
| O3i—Ni1—O3 | 180.00 (5) | C2—C1—C5 | 117.08 (14) |
| O3i—Ni1—O1 | 92.26 (5) | C4—N2—C3 | 121.02 (15) |
| O3—Ni1—O1 | 87.74 (5) | C4—N2—H1 | 119.5 |
| O3i—Ni1—O1i | 87.74 (5) | C3—N2—H1 | 119.5 |
| O3—Ni1—O1i | 92.26 (5) | N2—C3—C2 | 121.01 (17) |
| O1—Ni1—O1i | 180.00 (7) | N2—C3—H3 | 119.5 |
| O3i—Ni1—O2i | 93.96 (5) | C2—C3—H3 | 119.5 |
| O3—Ni1—O2i | 86.04 (5) | C4—C5—C1 | 119.69 (16) |
| O1—Ni1—O2i | 89.83 (5) | C4—C5—H5 | 120.2 |
| O1i—Ni1—O2i | 90.17 (5) | C1—C5—H5 | 120.2 |
| O3i—Ni1—O2 | 86.04 (5) | N2—C4—C5 | 121.31 (16) |
| O3—Ni1—O2 | 93.96 (5) | N2—C4—H4 | 119.3 |
| O1—Ni1—O2 | 90.17 (5) | C5—C4—H4 | 119.3 |
| O1i—Ni1—O2 | 89.83 (5) | C1—N1—H7 | 115.4 (19) |
| O2i—Ni1—O2 | 180.00 (7) | C1—N1—H6 | 123 (2) |
| Ni1—O1—H1O1 | 109.7 (18) | H7—N1—H6 | 121 (3) |
| Ni1—O1—H2O1 | 112.7 (19) | C3—C2—C1 | 119.88 (16) |
| H1O1—O1—H2O1 | 107.0 (19) | C3—C2—H2 | 120.1 |
| Ni1—O2—H1O2 | 123.5 (17) | C1—C2—H2 | 120.1 |
| Ni1—O2—H2O2 | 114.9 (14) | O6—S1—O4 | 111.02 (9) |
| H1O2—O2—H2O2 | 108.4 (18) | O6—S1—O5 | 109.76 (8) |
| Ni1—O3—H103 | 118.3 (16) | O4—S1—O5 | 110.07 (7) |
| Ni1—O3—H203 | 118.9 (13) | O6—S1—O7 | 108.89 (8) |
| H103—O3—H203 | 103.5 (18) | O4—S1—O7 | 109.07 (8) |
| N1—C1—C2 | 121.41 (14) | O5—S1—O7 | 107.96 (7) |
| N1—C1—C5 | 121.51 (14) |
| H··· | ||||
| N2—H1···O2ii | 0.86 | 2.43 | 3.102 (2) | 136 |
| N2—H1···O3iii | 0.86 | 2.23 | 2.983 (2) | 147 |
| O1—H1 | 0.82 (2) | 2.03 (2) | 2.8231 (16) | 163 (2) |
| O1—H2 | 0.86 (2) | 1.82 (2) | 2.6741 (16) | 172 (2) |
| O2—H1 | 0.83 (2) | 1.90 (2) | 2.6952 (17) | 161 (2) |
| O2—H2 | 0.84 (2) | 1.95 (2) | 2.7480 (16) | 159 (2) |
| N1—H6···O4ii | 0.80 (3) | 2.17 (3) | 2.957 (2) | 173 (3) |
| N1—H7···O5vi | 0.86 (3) | 2.55 (3) | 3.153 (2) | 129 (2) |
| N1—H7···O6vi | 0.86 (3) | 2.15 (3) | 2.998 (2) | 170 (2) |
| O3—H103···O5vii | 0.77 (2) | 1.96 (2) | 2.7072 (15) | 164 (2) |
| O3—H203···O7viii | 0.815 (19) | 1.876 (19) | 2.6682 (15) | 164 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H1⋯O2i | 0.86 | 2.43 | 3.102 (2) | 136 |
| N2—H1⋯O3ii | 0.86 | 2.23 | 2.983 (2) | 147 |
| O1—H1 | 0.82 (2) | 2.03 (2) | 2.8231 (16) | 163 (2) |
| O1—H2 | 0.86 (2) | 1.82 (2) | 2.6741 (16) | 172 (2) |
| O2—H1 | 0.83 (2) | 1.90 (2) | 2.6952 (17) | 161 (2) |
| O2—H2 | 0.84 (2) | 1.95 (2) | 2.7480 (16) | 159 (2) |
| N1—H6⋯O4i | 0.80 (3) | 2.17 (3) | 2.957 (2) | 173 (3) |
| N1—H7⋯O5v | 0.86 (3) | 2.55 (3) | 3.153 (2) | 129 (2) |
| N1—H7⋯O6v | 0.86 (3) | 2.15 (3) | 2.998 (2) | 170 (2) |
| O3—H103⋯O5vi | 0.77 (2) | 1.96 (2) | 2.7072 (15) | 164 (2) |
| O3—H203⋯O7vii | 0.815 (19) | 1.876 (19) | 2.6682 (15) | 164 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .