Literature DB >> 24523851

PROBABILISTIC PREDICTION OF NEUROLOGICAL DISORDERS WITH A STATISTICAL ASSESSMENT OF NEUROIMAGING DATA MODALITIES.

M Filippone1, A F Marquand2, C R V Blain3, S C R Williams4, J Mourão-Miranda5, M Girolami6.   

Abstract

For many neurological disorders, prediction of disease state is an important clinical aim. Neuroimaging provides detailed information about brain structure and function from which such predictions may be statistically derived. A multinomial logit model with Gaussian process priors is proposed to: (i) predict disease state based on whole-brain neuroimaging data and (ii) analyze the relative informativeness of different image modalities and brain regions. Advanced Markov chain Monte Carlo methods are employed to perform posterior inference over the model. This paper reports a statistical assessment of multiple neuroimaging modalities applied to the discrimination of three Parkinsonian neurological disorders from one another and healthy controls, showing promising predictive performance of disease states when compared to nonprobabilistic classifiers based on multiple modalities. The statistical analysis also quantifies the relative importance of different neuroimaging measures and brain regions in discriminating between these diseases and suggests that for prediction there is little benefit in acquiring multiple neuroimaging sequences. Finally, the predictive capability of different brain regions is found to be in accordance with the regional pathology of the diseases as reported in the clinical literature.

Entities:  

Keywords:  Gaussian process; Markov chain Monte Carlo; Multi-modality multinomial logit model; Parkinsonian diseases; hierarchical model; high-dimensional data; prediction of disease state

Year:  2012        PMID: 24523851      PMCID: PMC3918662          DOI: 10.1214/12-aoas562

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   2.083


  12 in total

Review 1.  Diffusion-tensor MRI: theory, experimental design and data analysis - a technical review.

Authors:  Peter J Basser; Derek K Jones
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

2.  Movement Disorders Society Scientific Issues Committee report: SIC Task Force appraisal of clinical diagnostic criteria for Parkinsonian disorders.

Authors:  Irene Litvan; Kailash P Bhatia; David J Burn; Christopher G Goetz; Anthony E Lang; Ian McKeith; Niall Quinn; Kapil D Sethi; Cliff Shults; Gregor K Wenning
Journal:  Mov Disord       Date:  2003-05       Impact factor: 10.338

3.  Construction of a 3D probabilistic atlas of human cortical structures.

Authors:  David W Shattuck; Mubeena Mirza; Vitria Adisetiyo; Cornelius Hojatkashani; Georges Salamon; Katherine L Narr; Russell A Poldrack; Robert M Bilder; Arthur W Toga
Journal:  Neuroimage       Date:  2007-11-26       Impact factor: 6.556

4.  Measuring brain stem and cerebellar damage in parkinsonian syndromes using diffusion tensor MRI.

Authors:  C R V Blain; G J Barker; J M Jarosz; N A Coyle; S Landau; R G Brown; K R Chaudhuri; A Simmons; D K Jones; S C R Williams; P N Leigh
Journal:  Neurology       Date:  2006-12-26       Impact factor: 9.910

5.  Automatic classification of patients with Alzheimer's disease from structural MRI: a comparison of ten methods using the ADNI database.

Authors:  Rémi Cuingnet; Emilie Gerardin; Jérôme Tessieras; Guillaume Auzias; Stéphane Lehéricy; Marie-Odile Habert; Marie Chupin; Habib Benali; Olivier Colliot
Journal:  Neuroimage       Date:  2010-06-11       Impact factor: 6.556

6.  Individual voxel-based subtype prediction can differentiate progressive supranuclear palsy from idiopathic Parkinson syndrome and healthy controls.

Authors:  Niels K Focke; Gunther Helms; Sebstian Scheewe; Pia M Pantel; Cornelius G Bachmann; Peter Dechent; Jens Ebentheuer; Alexander Mohr; Walter Paulus; Claudia Trenkwalder
Journal:  Hum Brain Mapp       Date:  2011-01-18       Impact factor: 5.038

Review 7.  Preliminary NINDS neuropathologic criteria for Steele-Richardson-Olszewski syndrome (progressive supranuclear palsy).

Authors:  J J Hauw; S E Daniel; D Dickson; D S Horoupian; K Jellinger; P L Lantos; A McKee; M Tabaton; I Litvan
Journal:  Neurology       Date:  1994-11       Impact factor: 9.910

8.  Neuroanatomy of verbal working memory as a diagnostic biomarker for depression.

Authors:  Andre F Marquand; Janaina Mourão-Miranda; Michael J Brammer; Anthony J Cleare; Cynthia H Y Fu
Journal:  Neuroreport       Date:  2008-10-08       Impact factor: 1.837

9.  Early pathological changes in the parkinsonian brain demonstrated by diffusion tensor MRI.

Authors:  K Yoshikawa; Y Nakata; K Yamada; M Nakagawa
Journal:  J Neurol Neurosurg Psychiatry       Date:  2004-03       Impact factor: 10.154

Review 10.  MRI for the differential diagnosis of neurodegenerative parkinsonism in clinical practice.

Authors:  Klaus Seppi
Journal:  Parkinsonism Relat Disord       Date:  2007       Impact factor: 4.891

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  12 in total

1.  Atlas-Based Classification Algorithms for Identification of Informative Brain Regions in fMRI Data.

Authors:  Juan E Arco; Paloma Díaz-Gutiérrez; Javier Ramírez; María Ruz
Journal:  Neuroinformatics       Date:  2020-04

2.  Investigating the effect of changing parameters when building prediction models for post-stroke aphasia.

Authors:  Ajay D Halai; Anna M Woollams; Matthew A Lambon Ralph
Journal:  Nat Hum Behav       Date:  2020-04-20

3.  Predicting the Naturalistic Course of Major Depressive Disorder Using Clinical and Multimodal Neuroimaging Information: A Multivariate Pattern Recognition Study.

Authors:  Lianne Schmaal; Andre F Marquand; Didi Rhebergen; Marie-José van Tol; Henricus G Ruhé; Nic J A van der Wee; Dick J Veltman; Brenda W J H Penninx
Journal:  Biol Psychiatry       Date:  2014-11-29       Impact factor: 13.382

4.  Multimodal prediction of conversion to Alzheimer's disease based on incomplete biomarkers.

Authors:  Kerstin Ritter; Julia Schumacher; Martin Weygandt; Ralph Buchert; Carsten Allefeld; John-Dylan Haynes
Journal:  Alzheimers Dement (Amst)       Date:  2015-04-30

5.  Decoding post-stroke motor function from structural brain imaging.

Authors:  Jane M Rondina; Maurizio Filippone; Mark Girolami; Nick S Ward
Journal:  Neuroimage Clin       Date:  2016-08-02       Impact factor: 4.881

6.  Decoding intracranial EEG data with multiple kernel learning method.

Authors:  Jessica Schrouff; Janaina Mourão-Miranda; Christophe Phillips; Josef Parvizi
Journal:  J Neurosci Methods       Date:  2015-12-12       Impact factor: 2.390

7.  Embedding Anatomical or Functional Knowledge in Whole-Brain Multiple Kernel Learning Models.

Authors:  Jessica Schrouff; J M Monteiro; L Portugal; M J Rosa; C Phillips; J Mourão-Miranda
Journal:  Neuroinformatics       Date:  2018-01

8.  Towards a brain-based predictome of mental illness.

Authors:  Barnaly Rashid; Vince Calhoun
Journal:  Hum Brain Mapp       Date:  2020-05-06       Impact factor: 5.038

9.  Bayesian multi-task learning for decoding multi-subject neuroimaging data.

Authors:  Andre F Marquand; Michael Brammer; Steven C R Williams; Orla M Doyle
Journal:  Neuroimage       Date:  2014-02-13       Impact factor: 6.556

10.  Multivariate decoding of brain images using ordinal regression.

Authors:  O M Doyle; J Ashburner; F O Zelaya; S C R Williams; M A Mehta; A F Marquand
Journal:  Neuroimage       Date:  2013-05-17       Impact factor: 6.556

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