Literature DB >> 24514385

Toward unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron lasers.

Hyung Joo Park, N Duane Loh, Raymond G Sierra, Christina Y Hampton, Dmitri Starodub, Andrew V Martin, Anton Barty, Andrew Aquila, Joachim Schulz, Jan Steinbrener, Robert L Shoeman, Lukas Lomb, Stephan Kassemeyer, Christoph Bostedt, John Bozek, Sascha W Epp, Benjamin Erk, Robert Hartmann, Daniel Rolles, Artem Rudenko, Benedikt Rudek, Lutz Foucar, Nils Kimmel, Georg Weidenspointner, Guenter Hauser, Peter Holl, Emanuele Pedersoli, Mengning Liang, Mark S Hunter, Lars Gumprecht, Nicola Coppola, Cornelia Wunderer, Heinz Graafsma, Filipe R N C Maia, Tomas Ekeberg, Max Hantke, Holger Fleckenstein, Helmut Hirsemann, Karol Nass, Herbert J Tobias, George R Farquar, W Henry Benner, Stefan Hau-Riege, Christian Reich, Andreas Hartmann, Heike Soltau, Stefano Marchesini, Sasa Bajt, Miriam Barthelmess, Lothar Strueder, Joachim Ullrich, Philip Bucksbaum, Matthias Frank, Ilme Schlichting, Henry N Chapman, Michael J Bogan, Veit Elser.   

Abstract

Single shot diffraction imaging experiments via X-ray free-electron lasers can generate as many as hundreds of thousands of diffraction patterns of scattering objects. Recovering the real space contrast of a scattering object from these patterns currently requires a reconstruction process with user guidance in a number of steps, introducing severe bottlenecks in data processing. We present a series of measures that replace user guidance with algorithms that reconstruct contrasts in an unsupervised fashion. We demonstrate the feasibility of automating the reconstruction process by generating hundreds of contrasts obtained from soot particle diffraction experiments.

Year:  2013        PMID: 24514385     DOI: 10.1364/OE.21.028729

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  9 in total

Review 1.  Methods and application of coherent X-ray diffraction imaging of noncrystalline particles.

Authors:  Masayoshi Nakasako; Amane Kobayashi; Yuki Takayama; Kenta Asakura; Mao Oide; Koji Okajima; Tomotaka Oroguchi; Masaki Yamamoto
Journal:  Biophys Rev       Date:  2020-03-16

2.  Data processing software suite SITENNO for coherent X-ray diffraction imaging using the X-ray free-electron laser SACLA.

Authors:  Yuki Sekiguchi; Tomotaka Oroguchi; Yuki Takayama; Masayoshi Nakasako
Journal:  J Synchrotron Radiat       Date:  2014-03-15       Impact factor: 2.616

3.  The 3D-architecture of individual free silver nanoparticles captured by X-ray scattering.

Authors:  Ingo Barke; Hannes Hartmann; Daniela Rupp; Leonie Flückiger; Mario Sauppe; Marcus Adolph; Sebastian Schorb; Christoph Bostedt; Rolf Treusch; Christian Peltz; Stephan Bartling; Thomas Fennel; Karl-Heinz Meiwes-Broer; Thomas Möller
Journal:  Nat Commun       Date:  2015-02-04       Impact factor: 14.919

4.  A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser.

Authors:  Chun Hong Yoon; Mikhail V Yurkov; Evgeny A Schneidmiller; Liubov Samoylova; Alexey Buzmakov; Zoltan Jurek; Beata Ziaja; Robin Santra; N Duane Loh; Thomas Tschentscher; Adrian P Mancuso
Journal:  Sci Rep       Date:  2016-04-25       Impact factor: 4.379

5.  Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.

Authors:  Ruslan P Kurta; Jeffrey J Donatelli; Chun Hong Yoon; Peter Berntsen; Johan Bielecki; Benedikt J Daurer; Hasan DeMirci; Petra Fromme; Max Felix Hantke; Filipe R N C Maia; Anna Munke; Carl Nettelblad; Kanupriya Pande; Hemanth K N Reddy; Jonas A Sellberg; Raymond G Sierra; Martin Svenda; Gijs van der Schot; Ivan A Vartanyants; Garth J Williams; P Lourdu Xavier; Andrew Aquila; Peter H Zwart; Adrian P Mancuso
Journal:  Phys Rev Lett       Date:  2017-10-12       Impact factor: 9.161

6.  The linac coherent light source single particle imaging road map.

Authors:  A Aquila; A Barty; C Bostedt; S Boutet; G Carini; D dePonte; P Drell; S Doniach; K H Downing; T Earnest; H Elmlund; V Elser; M Gühr; J Hajdu; J Hastings; S P Hau-Riege; Z Huang; E E Lattman; F R N C Maia; S Marchesini; A Ourmazd; C Pellegrini; R Santra; I Schlichting; C Schroer; J C H Spence; I A Vartanyants; S Wakatsuki; W I Weis; G J Williams
Journal:  Struct Dyn       Date:  2015-04-21       Impact factor: 2.920

7.  CFEL-ASG Software Suite (CASS): usage for free-electron laser experiments with biological focus.

Authors:  Lutz Foucar
Journal:  J Appl Crystallogr       Date:  2016-06-23       Impact factor: 3.304

8.  WavePropaGator: interactive framework for X-ray free-electron laser optics design and simulations.

Authors:  Liubov Samoylova; Alexey Buzmakov; Oleg Chubar; Harald Sinn
Journal:  J Appl Crystallogr       Date:  2016-07-06       Impact factor: 3.304

9.  Communication: X-ray coherent diffractive imaging by immersion in nanodroplets.

Authors:  Rico Mayro P Tanyag; Charles Bernando; Curtis F Jones; Camila Bacellar; Ken R Ferguson; Denis Anielski; Rebecca Boll; Sebastian Carron; James P Cryan; Lars Englert; Sascha W Epp; Benjamin Erk; Lutz Foucar; Luis F Gomez; Robert Hartmann; Daniel M Neumark; Daniel Rolles; Benedikt Rudek; Artem Rudenko; Katrin R Siefermann; Joachim Ullrich; Fabian Weise; Christoph Bostedt; Oliver Gessner; Andrey F Vilesov
Journal:  Struct Dyn       Date:  2015-10-14       Impact factor: 2.920

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.