| Literature DB >> 24512637 |
Yuping Zhang1, Renu Nandakumar, Shannon L Bartelt-Hunt, Daniel D Snow, Laurie Hodges, Xu Li.
Abstract
Human pathogens can internalize food crops through root and surface uptake and persist inside crop plants. The goal of the study was to elucidate the global modulation of bacteria and plant protein expression after Salmonella internalizes lettuce. A quantitative proteomic approach was used to analyse the protein expression of Salmonella enterica serovar Infantis and lettuce cultivar Green Salad Bowl 24 h after infiltrating S. Infantis into lettuce leaves. Among the 50 differentially expressed proteins identified by comparing internalized S. Infantis against S. Infantis grown in Luria Broth, proteins involved in glycolysis were down-regulated, while one protein involved in ascorbate uptake was up-regulated. Stress response proteins, especially antioxidant proteins, were up-regulated. The modulation in protein expression suggested that internalized S. Infantis might utilize ascorbate as a carbon source and require multiple stress response proteins to cope with stresses encountered in plants. On the other hand, among the 20 differentially expressed lettuce proteins, proteins involved in defense response to bacteria were up-regulated. Moreover, the secreted effector PipB2 of S. Infantis and R proteins of lettuce were induced after bacterial internalization into lettuce leaves, indicating human pathogen S. Infantis triggered the defense mechanisms of lettuce, which normally responds to plant pathogens.Entities:
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Year: 2014 PMID: 24512637 PMCID: PMC4265081 DOI: 10.1111/1751-7915.12114
Source DB: PubMed Journal: Microb Biotechnol ISSN: 1751-7915 Impact factor: 5.813
Proteins that were differentially expressed in S. Infantis after internalization into lettuce
| Protein name | Uniprot Accession | Gene | Fold change | # of unique peptides | |
|---|---|---|---|---|---|
| Putative PTS system, ascorbate-specific IIB component | D0ZQJ7 | 37.0 | <1.0E-04 | 2 | |
| Alcohol dehydrogenase | D0ZXP4 | −5.9 | <1.0E-04 | 7 | |
| Phosphopyruvate hydratase | D0ZVP5 | −8.8 | <1.0E-04 | 7 | |
| Tryptophan synthase subunit alpha | D0ZIZ5 | 20.6 | <1.0E-04 | 1 | |
| Aspartate-semialdehyde dehydrogenase | D0ZJH4 | 5.3 | <1.0E-04 | 1 | |
| Putative aspartate racemase | D0ZU78 | 5.0 | <1.0E-04 | 1 | |
| Allantoinase | D0ZP18 | 3.5 | 3.4E-02 | 2 | |
| Cytidylate kinase | D0ZSI5 | 6.5 | 5.1E-04 | 1 | |
| Dihydroorotase | D0ZUK7 | 20.5 | <1.0E-04 | 1 | |
| Acyl carrier protein | D0ZUP3 | 2.0 | <1.0E-04 | 3 | |
| Adenosylcobinamide kinase | D0ZMB8 | 4.0 | 1.7E-02 | 1 | |
| 50S Ribosomal protein L13 | D0ZY47 | 4.5 | 8.8E-03 | 2 | |
| Transcriptional regulator | D0ZR74 | 10.5 | <1.0E-04 | 1 | |
| tRNA-dihydrouridine synthase C | D0ZNJ3 | 6.0 | 1.1E-03 | 2 | |
| DNA binding protein | D0ZU24 | 4.0 | 1.7E-02 | 1 | |
| 23S rRNA 5-methyluridine methyltransferase | D0ZVQ3 | 4.0 | 1.7E-02 | 1 | |
| 30S Ribosomal subunit S22 | D0ZXP1 | -5.7 | 1.9E-02 | 3 | |
| Flagellin | D0ZL85 | -6.0 | 1.2E-02 | 4 | |
| Elongation factor Tu | D0ZIM1 | -2.1 | 3.2E-03 | 9 | |
| Lipid A biosynthesis lauroyl acyltransferase | D0ZUJ8 | 5.8 | <1.0E-04 | 1 | |
| Superoxide dismutase | D0ZWV7 | 7.0 | 2.4E-04 | 1 | |
| Superoxide dismutase | D0ZWW6 | 2.5 | 6.3E-03 | 2 | |
| Putative thiol-alkyl hydroperoxide reductase | D0ZMY2 | 2.0 | 2.7E-03 | 3 | |
| Bacterioferritin, iron storage and detoxification protein | D0ZIL8 | 7.0 | 2.4E-04 | 1 | |
| NAD(P)H dehydrogenase (quinone) | D0ZTQ2 | 3.3 | 1.2E-02 | 3 | |
| Putative intracellular proteinase | D0ZXW4 | −25.0 | <1.0E-04 | 4 | |
| Chaperonin | D0ZS62 | −2.5 | 2.6E-02 | ||
| Thioredoxin | D0ZNP5 | −8.7 | 1.3E-04 | 7 | |
| Transcriptional regulator HU subunit alpha | D0ZQX4 | −2.5 | <1.0E-04 | 5 | |
| Hypothetical protein STM14_1832 | D0ZXI6 | −11.0 | <1.0E-04 | 3 | |
| dTDP-Glucose 4,6-dehydratase | D0ZNQ1 | 5.5 | 2.2E-03 | 1 | |
| Hypothetical protein STM14_1021 | D0ZS98 | 6.0 | 1.1E-03 | 3 | |
| Sodium/panthothenate symporter | D0ZIF6 | 4.5 | 8.8E-03 | 2 | |
| Low affinity gluconate transporter | D0ZJH7 | 2.0 | 5.7E-03 | 1 | |
| Putative ABC-type multidrug transport system ATPase component | D0ZKD9 | 3.5 | 3.4E-02 | 1 | |
| Hypothetical protein STM14_0531 | D0ZN35 | 5.5 | 2.2E-03 | 1 | |
| Phage tail component H-like protein | D0ZST4 | 2.2 | 1.9E-02 | 2 | |
| Putative cytoplasmic protein | D0ZXI3 | 6.5 | <1.0E-04 | 1 | |
| Putative cytoplasmic protein | D0ZIZ8 | 2.0 | <1.0E-04 | 9 | |
| Hypothetical protein STM14_2884 | D0ZQJ3 | 6.0 | 1.1E-03 | 1 | |
| Hypothetical protein STM14_3293 | D0ZTU4 | 4.0 | 1.7E-02 | 1 | |
| Hypothetical protein STM14_4694 | D0ZMW1 | 2.4 | 1.7E-02 | 1 | |
| Putative type II restriction enzyme methylase subunit | D0ZU54 | 5.5 | 2.2E-03 | 1 | |
| Hypothetical protein STM14_0428 | D0ZM36 | −5.7 | 1.9E-02 | 2 | |
| Hypothetical protein STM14_0454 | D0ZM62 | −3.9 | 7.5E-04 | 4 | |
| Putative cytoplasmic protein | D0ZVJ6 | −14.0 | 1.0E-04 | 2 | |
| Hypothetical protein STM14_1588 | D0ZW41 | −5.4 | 2.8E-02 | 3 | |
| Putative cytoplasmic protein | D0ZJ87 | −6.3 | 7.9E-03 | 1 | |
| Hypothetical protein STM14_4278 | D0ZJJ1 | −8.8 | 2.1E-04 | 2 | |
Fig 1Changes in selective metabolic pathways (i.e. glycolysis, amino acid metabolism, ascorbate metabolism and TCA) of Salmonella internalized in lettuce leaves compared to Salmonella grown in LB. Proteins shown are: (1) 6-phosphofructokinase; (2) phosphoglycerate kinase; (3) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; (4) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; (5) phosphopyruvate hydratase; (6) alcohol dehydrogenase; (7) putative PTS system, ascorbate-specific IIB component; (8) tryptophan synthase subunit alpha; (9) L-asparaginase; (10) putative aspartate racemase; (11) aspartate kinase; (12) aspartate-semialdehyde dehydrogenase; (13) malate dehydrogenase.
Proteins that were differentially expressed in lettuce after internalization of S. infantis
| Protein name | Uniprot Accession | Gene | Fold change | # of unique peptides | |
|---|---|---|---|---|---|
| Pyruvate dehydrogenase E1 subunit beta-1 | Q38799 | PDH2 | 7.5 | <1.0E-04 | 2 |
| Triosephosphate isomerase | P48491 | CTIMC | 2.3 | 1.9E-02 | 2 |
| Fructose-bisphosphate aldolase 1 | F4IGL7 | FBA1 | −7.2 | 5.8E-03 | 1 |
| 2-cys Peroxiredoxin | Q96291 | BAS1 | 10.0 | 5.5E-04 | 1 |
| Actin 4 | P53497 | ACT12 | 3.5 | 2.4E-02 | 1 |
| Nucleoside diphosphate kinase | P39207 | NDPK1 | 2.9 | 2.8E-02 | 1 |
| Ribulose bisphosphate carboxylase/oxygenase activase | F4IVZ7 | RCA | −4.8 | 4.1E-02 | 2 |
| Selenoprotein, Rdx type | Q8W1E5 | AT5G58640 | 4.0 | 3.6E-03 | 1 |
| Superoxide dismutase [Cu-Zn] 1 | P24704 | CSD1 | 4.3 | 1.2E-02 | 2 |
| calmodulin 5 | P59220 | CAM7 | 5.7 | 2.4E-02 | 1 |
| Plasma membrane-associated cation-binding protein 1 | Q96262 | PCAP1 | 3.3 | 3.0E-02 | 1 |
| Oxygen-evolving enhancer protein 3-2 | Q41932 | PSBQ2 | 2.9 | <1.0E-04 | 3 |
| Oxygen-evolving enhancer protein 1–2 | Q9S841 | PSBO2 | 3.5 | 2.4E-02 | 2 |
| Two-component response regulator-like APRR2 | Q6LA43 | APRR2 | 2.3 | 4.5E-03 | 1 |
| 30S Ribosomal protein S31, chloroplastic | O80439 | RPS31 | 3.9 | 2.3E-03 | 1 |
| Ferredoxin-NADP reductase, leaf-type isozyme 2 | Q8W493 | LFNR2 | 2.7 | 6.8E-04 | 2 |
| 40S Ribosomal protein S8-2 | Q9FIF3 | RPS8B | 6.0 | 5.5E-04 | 1 |
| photosystem I reaction center subunit 2-2 | Q9S714 | PSAE2 | 4.0 | 1.2E-02 | 2 |
| 50S Ribosomal protein L12-1, chloroplastic | P36210 | RPL12A | 4.1 | 4.8E-02 | 2 |
| Purple acid phosphatase 13 | Q9SIV9 | PAP10 | −4.8 | <1.0E-04 | 1 |