Literature DB >> 2450333

Rapid extraction of high molecular weight RNA from cultured cells and granulocytes for Northern analysis.

H C Birnboim1.   

Abstract

The study of messenger RNA in mammalian cells by Northern analysis requires the extraction of intact RNA in pure form. Although a number of reliable techniques have been developed for the purpose, most are fairly complex, involving steps such as ultracentrifugation and multiple extractions with large volumes of phenol and chloroform. When the number of cell samples to be analyzed is large, these techniques can be unwieldy. I now describe an RNA purification procedure which is simple enough to allow handling of a large number of cultured cell samples. It uses safe and inexpensive reagents and produces a high yield of pure total cell RNA, essentially free of DNA and ribonuclease, suitable for Northern analysis. The procedure also allows extraction of intact RNA from human granulocytes, cells which are rich in ribonuclease and contain very low amounts of RNA.

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Year:  1988        PMID: 2450333      PMCID: PMC336329          DOI: 10.1093/nar/16.4.1487

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  Purification of functional RNA from human granulocytes.

Authors:  A Yang; D M Miller
Journal:  J Lab Clin Med       Date:  1985-01

2.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

3.  Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes.

Authors:  J C Alwine; D J Kemp; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

4.  Isolation and fractionation of total nucleic acids from tissues and cells.

Authors:  S A Krawetz; J C States; G H Dixon
Journal:  J Biochem Biophys Methods       Date:  1986-01

5.  A method for isolation of intact, translationally active ribonucleic acid.

Authors:  G Cathala; J F Savouret; B Mendez; B L West; M Karin; J A Martial; J D Baxter
Journal:  DNA       Date:  1983

6.  Molecular structure and evolutionary origin of human cardiac muscle actin gene.

Authors:  H Hamada; M G Petrino; T Kakunaga
Journal:  Proc Natl Acad Sci U S A       Date:  1982-10       Impact factor: 11.205

7.  Co-existence of vinculin and a vinculin-like protein of higher molecular weight in smooth muscle.

Authors:  J R Feramisco; J E Smart; K Burridge; D M Helfman; G P Thomas
Journal:  J Biol Chem       Date:  1982-09-25       Impact factor: 5.157

8.  Fibronectin gene expression in polymorphonuclear leukocytes. Accumulation of mRNA in inflammatory cells.

Authors:  M La Fleur; A D Beaulieu; C Kreis; P Poubelle
Journal:  J Biol Chem       Date:  1987-02-15       Impact factor: 5.157

9.  Purification of mouse immunoglobulin heavy-chain messenger RNAs from total myeloma tumor RNA.

Authors:  C Auffray; F Rougeon
Journal:  Eur J Biochem       Date:  1980-06

10.  Quantitative studies of the growth of mouse embryo cells in culture and their development into established lines.

Authors:  G J TODARO; H GREEN
Journal:  J Cell Biol       Date:  1963-05       Impact factor: 10.539

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  29 in total

Review 1.  Molecular detection of pathogen DNA in ticks (Acari: Ixodidae): a review.

Authors:  O A Sparagano; M T Allsopp; R A Mank; S G Rijpkema; J V Figueroa; F Jongejan
Journal:  Exp Appl Acarol       Date:  1999-12       Impact factor: 2.132

2.  Retroposons do jump: a B2 element recently integrated in an 18S rDNA gene.

Authors:  I Oberbäumer
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

3.  Evaluation of mRNA steady-state and protein levels for basement membrane proteins in cultured murine cells.

Authors:  I Oberbäumer; C Speth
Journal:  Cell Tissue Res       Date:  1992-06       Impact factor: 5.249

4.  A human cellular sequence implicated in trk oncogene activation is DNA damage inducible.

Authors:  R Ben-Ishai; R Scharf; R Sharon; I Kapten
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

5.  Transcriptionally active regions in the genome of the archaebacterium Haloferax volcanii.

Authors:  B A Trieselmann; R L Charlebois
Journal:  J Bacteriol       Date:  1992-01       Impact factor: 3.490

6.  Comparative study of renin expression in the coagulating glands of C57BL/6 and Balb/c mice.

Authors:  Y Kon; D Endoh; A Fukamizu; K Murakami; Y Hashimoto; M Sugimura
Journal:  J Anat       Date:  1992-10       Impact factor: 2.610

7.  Simple method of RNA isolation from human leucocytic cell lines.

Authors:  F Vauti; W Siess
Journal:  Nucleic Acids Res       Date:  1993-10-11       Impact factor: 16.971

8.  Chinese hamster fibroblasts overexpressing CuZn-superoxide dismutase undergo a global reduction in antioxidants and an increasing sensitivity of DNA to oxidative damage.

Authors:  H D Teixeira; R Meneghini
Journal:  Biochem J       Date:  1996-05-01       Impact factor: 3.857

9.  E1A + cHa-ras transformed rat embryo fibroblast cells are characterized by high and constitutive DNA binding activities of AP-1 dimers with significantly altered composition.

Authors:  T V Pospelova; A V Medvedev; A N Kukushkin; S B Svetlikova; A J van der Eb; J C Dorsman; V A Pospelov
Journal:  Gene Expr       Date:  1999

10.  Amplification and increased expression of alpha class glutathione S-transferase-encoding genes associated with resistance to nitrogen mustards.

Authors:  A D Lewis; I D Hickson; C N Robson; A L Harris; J D Hayes; S A Griffiths; M M Manson; A E Hall; J E Moss; C R Wolf
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

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