Literature DB >> 24500474

Paenibacillus swuensis sp. nov., a bacterium isolated from soil.

Jae-Jin Lee1, Da-Hye Yang, Ye-Sil Ko, Jae-Kyoung Park, Eun-Young Im, Ju-Yeon Kim, Ka-Young Kwon, Yu-Jung Lee, Hyung-Mi Kim, Myung Kyum Kim.   

Abstract

Strain DY6(T), a Gram-positive endospore-forming motile rod-shaped bacterium, was isolated from soil in South Korea and characterized to determine its taxonomic position. Phylogenetic analyses based on the 16S rRNA gene sequence of strain DY6(T) revealed that strain DY6(T) belongs to the genus Paenibacillus in the family Paenibacillaceae in the class Bacilli. The highest degree of sequence similarities of strain DY6(T) were found with Paenibacillus gansuensis B518(T) (97.9%), P. chitinolyticus IFO 15660(T) (95.3%), P. chinjuensis WN9T (94.7%), and P. rigui WPCB173(T) (94.7%). Chemotaxonomic data revealed that the predominant fatty acids were anteiso-C(15:0) (38.7%) and C(16:0) (18.0%). A complex polar lipid profile consisted of major amounts of diphosphatidylglycerol, phosphatidylethanolamine, and phosphatidylglycerol. The predominant respiratory quinone was MK-7. Based on these phylogenetic, chemotaxonomic, and phenotypic data, strain DY6(T) (=KCTC 33026(T) =JCM 18491(T)) should be classified as a type strain of a novel species, for which the name Paenibacillus swuensis sp. nov. is proposed.

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Year:  2014        PMID: 24500474     DOI: 10.1007/s12275-014-3546-x

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  20 in total

1.  Deinococcus aquaticus sp. nov., isolated from fresh water, and Deinococcus caeni sp. nov., isolated from activated sludge.

Authors:  Wan-Taek Im; Hae-Min Jung; Leonid N Ten; Myung Kyum Kim; Nagamani Bora; Michael Goodfellow; Sangyong Lim; Jinwoo Jung; Sung-Taik Lee
Journal:  Int J Syst Evol Microbiol       Date:  2008-10       Impact factor: 2.747

2.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Paenibacillus rigui sp. nov., isolated from a freshwater wetland.

Authors:  Keun Sik Baik; Chae Hong Lim; Han Na Choe; Eun Mi Kim; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2010-04-09       Impact factor: 2.747

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Deinococcus daejeonensis sp. nov., isolated from sludge in a sewage disposal plant.

Authors:  Sathiyaraj Srinivasan; Myung Kyum Kim; Sangyong Lim; Minho Joe; Myungjin Lee
Journal:  Int J Syst Evol Microbiol       Date:  2011-07-15       Impact factor: 2.747

8.  Paenibacillus gansuensis sp. nov., isolated from desert soil of Gansu Province in China.

Authors:  Jee-Min Lim; Che Ok Jeon; Jae-Chan Lee; Li-Hua Xu; Cheng-Lin Jiang; Chang-Jin Kim
Journal:  Int J Syst Evol Microbiol       Date:  2006-09       Impact factor: 2.747

9.  Recurrent isolation of hydrogen peroxide-resistant spores of Bacillus pumilus from a spacecraft assembly facility.

Authors:  Michael J Kempf; Fei Chen; Roger Kern; Kasthuri Venkateswaran
Journal:  Astrobiology       Date:  2005-06       Impact factor: 4.335

10.  Paenibacillus chinjuensis sp. nov., a novel exopolysaccharide-producing bacterium.

Authors:  Jung-Hoon Yoon; Weon-Taek Seo; Yong Kook Shin; Yung Hee Kho; Kook Hee Kang; Yong-Ha Park
Journal:  Int J Syst Evol Microbiol       Date:  2002-03       Impact factor: 2.747

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