Literature DB >> 18842854

Deinococcus aquaticus sp. nov., isolated from fresh water, and Deinococcus caeni sp. nov., isolated from activated sludge.

Wan-Taek Im1, Hae-Min Jung, Leonid N Ten, Myung Kyum Kim, Nagamani Bora, Michael Goodfellow, Sangyong Lim, Jinwoo Jung, Sung-Taik Lee.   

Abstract

The taxonomic positions of two environmental isolates from South Korea were established using a combination of genotypic and phenotypic data. The organisms, designated PB314(T) and Ho-08(T), were Gram-negative, rod-shaped and non-spore-forming and had chemotaxonomic properties consistent with their classification in the genus Deinococcus 16S rRNA gene tree, the highest sequence similarities being shown to the type strains of Deinococcus grandis (96.3-96.7 %) and Deinococcus indicus (96.3-96.4 %). The isolates shared relatively high 16S rRNA gene sequence similarity (98.1 %) but had a DNA-DNA relatedness value of only 22 %. Chemotaxonomic data revealed that both strains possess quinone system MK-8 as the predominant compound, C(16 : 1)omega7c and C(16 : 0) as major fatty acids and ornithine as a diamino acid in the peptidoglycan structure, corroborating our assignment of the strains to the genus Deinococcus. The results of phylogenetic analyses based on 16S rRNA gene sequences, DNA-DNA relatedness values and physiological and biochemical tests clearly demonstrated that the two strains represent distinct species. On the basis of these data, two novel species, Deinococcus aquaticus sp. nov. (type strain PB314(T) =KCTC 12552(T) =NBRC 101311(T)) and Deinococcus caeni sp. nov. (type strain Ho-08(T) =KCTC 12553(T) =NBRC 101312(T)), are proposed.

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Year:  2008        PMID: 18842854     DOI: 10.1099/ijs.0.64082-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  18 in total

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Authors:  Seok-Gwan Choi; Seon Hwa Jeon; Jae-Bong Lee; Eun Sun Joo; Sangyong Lim; Hee-Young Jung; Myung Kyum Kim
Journal:  J Microbiol       Date:  2016-11-26       Impact factor: 3.422

2.  Identification of nitrite-reducing bacteria using sequential mRNA fluorescence in situ hybridization and fluorescence-assisted cell sorting.

Authors:  Cesar R Mota; Mark Jason So; Francis L de los Reyes
Journal:  Microb Ecol       Date:  2012-02-28       Impact factor: 4.552

3.  Paenibacillus swuensis sp. nov., a bacterium isolated from soil.

Authors:  Jae-Jin Lee; Da-Hye Yang; Ye-Sil Ko; Jae-Kyoung Park; Eun-Young Im; Ju-Yeon Kim; Ka-Young Kwon; Yu-Jung Lee; Hyung-Mi Kim; Myung Kyum Kim
Journal:  J Microbiol       Date:  2014-02-01       Impact factor: 3.422

4.  Deinococcus seoulensis sp. nov., a bacterium isolated from sediment at Han River in Seoul, Republic of Korea.

Authors:  Jae-Jin Lee; Yeon-Hee Lee; Su-Jin Park; Sangyong Lim; Sun-Wook Jeong; Seung-Yeol Lee; Young-Je Cho; Myung Kyum Kim; Hee-Young Jung
Journal:  J Microbiol       Date:  2016-08-02       Impact factor: 3.422

5.  Deinococcus sedimenti sp. nov. isolated from river sediment.

Authors:  Jae-Jin Lee; Yeon-Hee Lee; Su-Jin Park; Sangyong Lim; Sun-Wook Jeong; Seung-Yeol Lee; Sangkyu Park; Hyo-Won Choi; Myung Kyum Kim; Hee-Young Jung
Journal:  J Microbiol       Date:  2016-11-26       Impact factor: 3.422

Review 6.  Radiation resistance in thermophiles: mechanisms and applications.

Authors:  Preeti Ranawat; Seema Rawat
Journal:  World J Microbiol Biotechnol       Date:  2017-05-03       Impact factor: 3.312

Review 7.  Oxidative stress resistance in Deinococcus radiodurans.

Authors:  Dea Slade; Miroslav Radman
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

8.  Deinococcus soli sp. nov., a gamma-radiation-resistant bacterium isolated from rice field soil.

Authors:  Seho Cha; Sathiyaraj Srinivasan; Taegun Seo; Myung Kyum Kim
Journal:  Curr Microbiol       Date:  2014-02-20       Impact factor: 2.188

9.  Quorum sensing circuit and reactive oxygen species resistance in Deinococcus sp.

Authors:  G Fernandez-Bunster; C Gonzalez; J Barros; M Martinez
Journal:  Curr Microbiol       Date:  2012-09-11       Impact factor: 2.188

10.  Deinococcus swuensis sp. nov., a gamma-radiation-resistant bacterium isolated from soil.

Authors:  Jae-Jin Lee; Hyun Ji Lee; Gi Seon Jang; Ja Myoung Yu; Ji Yoon Cha; Su Jeong Kim; Eun Bit Lee; Myung Kyum Kim
Journal:  J Microbiol       Date:  2013-06-28       Impact factor: 3.422

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