Literature DB >> 24487920

Long livestock farming history and human landscape shaping revealed by lake sediment DNA.

Charline Giguet-Covex1, Johan Pansu2, Fabien Arnaud3, Pierre-Jérôme Rey3, Christophe Griggo3, Ludovic Gielly4, Isabelle Domaizon5, Eric Coissac4, Fernand David6, Philippe Choler7, Jérôme Poulenard3, Pierre Taberlet4.   

Abstract

The reconstruction of human-driven, Earth-shaping dynamics is important for understanding past human/environment interactions and for helping human societies that currently face global changes. However, it is often challenging to distinguish the effects of the climate from human activities on environmental changes. Here we evaluate an approach based on DNA metabarcoding used on lake sediments to provide the first high-resolution reconstruction of plant cover and livestock farming history since the Neolithic Period. By comparing these data with a previous reconstruction of erosive event frequency, we show that the most intense erosion period was caused by deforestation and overgrazing by sheep and cowherds during the Late Iron Age and Roman Period. Tracking plants and domestic mammals using lake sediment DNA (lake sedDNA) is a new, promising method for tracing past human practices, and it provides a new outlook of the effects of anthropogenic factors on landscape-scale changes.

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Year:  2014        PMID: 24487920     DOI: 10.1038/ncomms4211

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  32 in total

1.  A comparison of eDNA to camera trapping for assessment of terrestrial mammal diversity.

Authors:  Kevin Leempoel; Trevor Hebert; Elizabeth A Hadly
Journal:  Proc Biol Sci       Date:  2020-01-15       Impact factor: 5.349

Review 2.  Human evolution: a tale from ancient genomes.

Authors:  Bastien Llamas; Eske Willerslev; Ludovic Orlando
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-02-05       Impact factor: 6.237

Review 3.  Strategies for sample labelling and library preparation in DNA metabarcoding studies.

Authors:  Kristine Bohmann; Vasco Elbrecht; Christian Carøe; Iliana Bista; Florian Leese; Michael Bunce; Douglas W Yu; Mathew Seymour; Alex J Dumbrell; Simon Creer
Journal:  Mol Ecol Resour       Date:  2021-10-13       Impact factor: 8.678

Review 4.  Ancient and modern environmental DNA.

Authors:  Mikkel Winther Pedersen; Søren Overballe-Petersen; Luca Ermini; Clio Der Sarkissian; James Haile; Micaela Hellstrom; Johan Spens; Philip Francis Thomsen; Kristine Bohmann; Enrico Cappellini; Ida Bærholm Schnell; Nathan A Wales; Christian Carøe; Paula F Campos; Astrid M Z Schmidt; M Thomas P Gilbert; Anders J Hansen; Ludovic Orlando; Eske Willerslev
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

5.  Ancient DNA, lipid biomarkers and palaeoecological evidence reveals construction and life on early medieval lake settlements.

Authors:  A G Brown; M Van Hardenbroek; T Fonville; K Davies; H Mackay; E Murray; K Head; P Barratt; F McCormick; G F Ficetola; L Gielly; A C G Henderson; A Crone; G Cavers; P G Langdon; N J Whitehouse; D Pirrie; I G Alsos
Journal:  Sci Rep       Date:  2021-06-03       Impact factor: 4.379

Review 6.  Evolutionary Patterns and Processes: Lessons from Ancient DNA.

Authors:  Michela Leonardi; Pablo Librado; Clio Der Sarkissian; Mikkel Schubert; Ahmed H Alfarhan; Saleh A Alquraishi; Khaled A S Al-Rasheid; Cristina Gamba; Eske Willerslev; Ludovic Orlando
Journal:  Syst Biol       Date:  2017-01-01       Impact factor: 9.160

7.  Performance and automation of ancient DNA capture with RNA hyRAD probes.

Authors:  Tomasz Suchan; Mariya A Kusliy; Naveed Khan; Loreleï Chauvey; Laure Tonasso-Calvière; Stéphanie Schiavinato; John Southon; Marcel Keller; Keiko Kitagawa; Johannes Krause; Alexander N Bessudnov; Alexander A Bessudnov; Alexander S Graphodatsky; Silvia Valenzuela-Lamas; Jarosław Wilczyński; Sylwia Pospuła; Krzysztof Tunia; Marek Nowak; Magdalena Moskal-delHoyo; Alexey A Tishkin; Alexander J E Pryor; Alan K Outram; Ludovic Orlando
Journal:  Mol Ecol Resour       Date:  2021-10-15       Impact factor: 8.678

8.  Chemical Analysis of Pottery Demonstrates Prehistoric Origin for High-Altitude Alpine Dairying.

Authors:  Francesco Carrer; André Carlo Colonese; Alexandre Lucquin; Eduardo Petersen Guedes; Anu Thompson; Kevin Walsh; Thomas Reitmaier; Oliver E Craig
Journal:  PLoS One       Date:  2016-04-21       Impact factor: 3.240

9.  High-Throughput DNA sequencing of ancient wood.

Authors:  Stefanie Wagner; Frédéric Lagane; Andaine Seguin-Orlando; Mikkel Schubert; Thibault Leroy; Erwan Guichoux; Emilie Chancerel; Inger Bech-Hebelstrup; Vincent Bernard; Cyrille Billard; Yves Billaud; Matthias Bolliger; Christophe Croutsch; Katarina Čufar; Frédérique Eynaud; Karl Uwe Heussner; Joachim Köninger; Fabien Langenegger; Frédéric Leroy; Christine Lima; Nicoletta Martinelli; Garry Momber; André Billamboz; Oliver Nelle; Antoni Palomo; Raquel Piqué; Marianne Ramstein; Roswitha Schweichel; Harald Stäuble; Willy Tegel; Xavier Terradas; Florence Verdin; Christophe Plomion; Antoine Kremer; Ludovic Orlando
Journal:  Mol Ecol       Date:  2018-03-03       Impact factor: 6.185

Review 10.  Relevance of Crop Biology for Environmental Risk Assessment of Genetically Modified Crops in Africa.

Authors:  Olalekan Akinbo; James F Hancock; Diran Makinde
Journal:  Front Bioeng Biotechnol       Date:  2015-10-09
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