Literature DB >> 24469451

A novel structural unit in the N-terminal region of filamins.

Ritika Sethi1, Jonne Seppälä, Helena Tossavainen, Mikko Ylilauri, Salla Ruskamo, Olli T Pentikäinen, Ulla Pentikäinen, Perttu Permi, Jari Ylänne.   

Abstract

Immunoglobulin-like (Ig) domains are a widely expanded superfamily that act as interaction motifs or as structural spacers in multidomain proteins. Vertebrate filamins (FLNs), which are multifunctional actin-binding proteins, consist of 24 Ig domains. We have recently discovered that in the C-terminal rod 2 region of FLN, Ig domains interact with each other forming functional domain pairs, where the interaction with signaling and transmembrane proteins is mechanically regulated by weak actomyosin contraction forces. Here, we investigated if there are similar inter-domain interactions around domain 4 in the N-terminal rod 1 region of FLN. Protein crystal structures revealed a new type of domain organization between domains 3, 4, and 5. In this module, domains 4 and 5 interact rather tightly, whereas domain 3 has a partially flexible interface with domain 4. NMR peptide titration experiments showed that within the three-domain module, domain 4 is capable for interaction with a peptide derived from platelet glycoprotein Ib. Crystal structures of FLN domains 4 and 5 in complex with the peptide revealed a typical β sheet augmentation interaction observed for many FLN ligands. Domain 5 was found to stabilize domain 4, and this could provide a mechanism for the regulation of domain 4 interactions.

Keywords:  Cell Signaling; Filamin; Immunogloblulin-like Domain; Microfilaments; NMR; Platelet Glycoprotein Ib; Protein-Protein Interactions; Structural Biology; X-ray Crystallography; X-ray Scattering

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Substances:

Year:  2014        PMID: 24469451      PMCID: PMC3961682          DOI: 10.1074/jbc.M113.537456

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  58 in total

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Journal:  J Biomol Screen       Date:  2001-12

3.  Determination of domain structure of proteins from X-ray solution scattering.

Authors:  D I Svergun; M V Petoukhov; M H Koch
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

Review 4.  Structural and functional aspects of filamins.

Authors:  A van der Flier; A Sonnenberg
Journal:  Biochim Biophys Acta       Date:  2001-04-23

5.  A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.

Authors:  Yong Duan; Chun Wu; Shibasish Chowdhury; Mathew C Lee; Guoming Xiong; Wei Zhang; Rong Yang; Piotr Cieplak; Ray Luo; Taisung Lee; James Caldwell; Junmei Wang; Peter Kollman
Journal:  J Comput Chem       Date:  2003-12       Impact factor: 3.376

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7.  Refinement of macromolecular structures by the maximum-likelihood method.

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9.  Filamin A binding to the cytoplasmic tail of glycoprotein Ibalpha regulates von Willebrand factor-induced platelet activation.

Authors:  Shuju Feng; Julio C Reséndiz; Xin Lu; Michael H Kroll
Journal:  Blood       Date:  2003-06-05       Impact factor: 22.113

10.  Interaction between platelet glycoprotein Ibalpha and filamin-1 is essential for glycoprotein Ib/IX receptor anchorage at high shear.

Authors:  David Williamson; Inna Pikovski; Susan L Cranmer; Pierre Mangin; Nayna Mistry; Teresa Domagala; Sam Chehab; Francois Lanza; Hatem H Salem; Shaun P Jackson
Journal:  J Biol Chem       Date:  2001-11-07       Impact factor: 5.157

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  12 in total

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Authors:  Tatu J K Haataja; Romain Capoulade; Simon Lecointe; Maarit Hellman; Jean Merot; Perttu Permi; Ulla Pentikäinen
Journal:  Biophys J       Date:  2019-08-31       Impact factor: 4.033

2.  Combining theoretical and experimental data to decipher CFTR 3D structures and functions.

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3.  Non-syndromic Mitral Valve Dysplasia Mutation Changes the Force Resilience and Interaction of Human Filamin A.

Authors:  Tatu J K Haataja; Rafael C Bernardi; Simon Lecointe; Romain Capoulade; Jean Merot; Ulla Pentikäinen
Journal:  Structure       Date:  2018-10-18       Impact factor: 5.006

4.  Conformational plasticity and evolutionary analysis of the myotilin tandem Ig domains.

Authors:  Vid Puž; Miha Pavšič; Brigita Lenarčič; Kristina Djinović-Carugo
Journal:  Sci Rep       Date:  2017-06-21       Impact factor: 4.379

5.  Skeletal Dysplasia Mutations Effect on Human Filamins' Structure and Mechanosensing.

Authors:  Jonne Seppälä; Rafael C Bernardi; Tatu J K Haataja; Maarit Hellman; Olli T Pentikäinen; Klaus Schulten; Perttu Permi; Jari Ylänne; Ulla Pentikäinen
Journal:  Sci Rep       Date:  2017-06-26       Impact factor: 4.379

6.  Clinical exome sequencing revealed that FLNC variants contribute to the early diagnosis of cardiomyopathies in infant patients.

Authors:  Feifan Xiao; Qiufen Wei; Bingbing Wu; Xu Liu; Aiyao Mading; Lin Yang; Yan Li; Fang Liu; Xinnian Pan; Huijun Wang
Journal:  Transl Pediatr       Date:  2020-02

7.  Flexible Structure of Peptide-Bound Filamin A Mechanosensor Domain Pair 20-21.

Authors:  Jonne Seppälä; Helena Tossavainen; Nebojsa Rodic; Perttu Permi; Ulla Pentikäinen; Jari Ylänne
Journal:  PLoS One       Date:  2015-08-31       Impact factor: 3.240

8.  Small-angle X-ray scattering reveals compact domain-domain interactions in the N-terminal region of filamin C.

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9.  MVP-Associated Filamin A Mutations Affect FlnA-PTPN12 (PTP-PEST) Interactions.

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Journal:  J Cardiovasc Dev Dis       Date:  2015-09-08

Review 10.  Structure and Function of Filamin C in the Muscle Z-Disc.

Authors:  Zhenfeng Mao; Fumihiko Nakamura
Journal:  Int J Mol Sci       Date:  2020-04-13       Impact factor: 5.923

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