Literature DB >> 24459723

Towards a mechanism for histone chaperones.

Simon J Elsässer1, Sheena D'Arcy2.   

Abstract

Histone chaperones can be broadly defined as histone-binding proteins that influence chromatin dynamics in an ATP-independent manner. Their existence reflects the importance of chromatin homeostasis and the unique and unusual biochemistry of the histone proteins. Histone supply and demand at chromatin is regulated by a network of structurally and functionally diverse histone chaperones. At the core of this network is a mechanistic variability that is only beginning to be appreciated. In this review, we highlight the challenges in determining histone chaperone mechanism and discuss possible mechanisms in the context of nucleosome thermodynamics. We discuss how histone chaperones prevent promiscuous histone interactions, and consider if this activity represents the full extent of histone chaperone function in governing chromatin dynamics. This article is part of a Special Issue entitled: Histone chaperones and Chromatin assembly.

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Year:  2013        PMID: 24459723      PMCID: PMC3315836          DOI: 10.1016/j.bbagrm.2011.07.007

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  106 in total

1.  A role for nucleosome assembly protein 1 in the nuclear transport of histones H2A and H2B.

Authors:  Nima Mosammaparast; Courtney S Ewart; Lucy F Pemberton
Journal:  EMBO J       Date:  2002-12-02       Impact factor: 11.598

2.  The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3.

Authors:  Pascal Drané; Khalid Ouararhni; Arnaud Depaux; Muhammad Shuaib; Ali Hamiche
Journal:  Genes Dev       Date:  2010-05-26       Impact factor: 11.361

3.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

Review 4.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

5.  On the mechanism of nucleosome assembly by histone chaperone NAP1.

Authors:  Jacek Mazurkiewicz; J Felix Kepert; Karsten Rippe
Journal:  J Biol Chem       Date:  2006-03-12       Impact factor: 5.157

6.  Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

Authors:  R E Sobel; R G Cook; C A Perry; A T Annunziato; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

7.  Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis.

Authors:  Hideaki Tagami; Dominique Ray-Gallet; Geneviève Almouzni; Yoshihiro Nakatani
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

8.  Nucleosome accessibility governed by the dimer/tetramer interface.

Authors:  Vera Böhm; Aaron R Hieb; Andrew J Andrews; Alexander Gansen; Andrea Rocker; Katalin Tóth; Karolin Luger; Jörg Langowski
Journal:  Nucleic Acids Res       Date:  2010-12-21       Impact factor: 16.971

9.  The histone chaperones Nap1 and Vps75 bind histones H3 and H4 in a tetrameric conformation.

Authors:  Andrew Bowman; Richard Ward; Nicola Wiechens; Vijender Singh; Hassane El-Mkami; David George Norman; Tom Owen-Hughes
Journal:  Mol Cell       Date:  2011-02-18       Impact factor: 17.970

10.  Histone chaperone specificity in Rtt109 activation.

Authors:  Young-Jun Park; Keely B Sudhoff; Andrew J Andrews; Laurie A Stargell; Karolin Luger
Journal:  Nat Struct Mol Biol       Date:  2008-09       Impact factor: 15.369

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  34 in total

Review 1.  The right place at the right time: chaperoning core histone variants.

Authors:  Francesca Mattiroli; Sheena D'Arcy; Karolin Luger
Journal:  EMBO Rep       Date:  2015-10-12       Impact factor: 8.807

2.  ASF1 and the SWI/SNF complex interact functionally during nucleosome displacement, while FACT is required for nucleosome reassembly at yeast heat shock gene promoters during sustained stress.

Authors:  Tamara Y Erkina; Alexandre Erkine
Journal:  Cell Stress Chaperones       Date:  2014-11-22       Impact factor: 3.667

3.  Catch me if you can: how the histone chaperone FACT capitalizes on nucleosome breathing.

Authors:  Maria Hondele; Andreas G Ladurner
Journal:  Nucleus       Date:  2013-12-05       Impact factor: 4.197

Review 4.  Epigenetic regulation of genomic integrity.

Authors:  Angela K Deem; Xuan Li; Jessica K Tyler
Journal:  Chromosoma       Date:  2012-01-17       Impact factor: 4.316

5.  Comprehensive analysis of histone-binding proteins with multi-angle light scattering.

Authors:  Prithwijit Sarkar; Noushin Akhavantabib; Sheena D'Arcy
Journal:  Methods       Date:  2020-01-25       Impact factor: 3.608

6.  A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis.

Authors:  Sascha Waidmann; Branislav Kusenda; Juliane Mayerhofer; Karl Mechtler; Claudia Jonak
Journal:  Plant Cell       Date:  2014-11-11       Impact factor: 11.277

7.  Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone.

Authors:  Abhilash Padavannil; Prithwijit Sarkar; Seung Joong Kim; Tolga Cagatay; Jenny Jiou; Chad A Brautigam; Diana R Tomchick; Andrej Sali; Sheena D'Arcy; Yuh Min Chook
Journal:  Elife       Date:  2019-03-11       Impact factor: 8.140

8.  The U4/U6 recycling factor SART3 has histone chaperone activity and associates with USP15 to regulate H2B deubiquitination.

Authors:  Lindsey Long; Joseph P Thelen; Melonnie Furgason; Mahmood Haj-Yahya; Ashraf Brik; Dongmei Cheng; Junmin Peng; Tingting Yao
Journal:  J Biol Chem       Date:  2014-02-13       Impact factor: 5.157

9.  DAXX envelops a histone H3.3-H4 dimer for H3.3-specific recognition.

Authors:  Simon J Elsässer; Hongda Huang; Peter W Lewis; Jason W Chin; C David Allis; Dinshaw J Patel
Journal:  Nature       Date:  2012-10-17       Impact factor: 49.962

Review 10.  Histone modifications and DNA double-strand break repair after exposure to ionizing radiations.

Authors:  Clayton R Hunt; Deepti Ramnarain; Nobuo Horikoshi; Puneeth Iyengar; Raj K Pandita; Jerry W Shay; Tej K Pandita
Journal:  Radiat Res       Date:  2013-02-01       Impact factor: 2.841

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