Literature DB >> 24454269

2,2'-[(1,3,4-Thia-diazole-2,5-di-yl)bis-(sulfanedi-yl)]diaceto-nitrile.

Joel T Mague1, Mehmet Akkurt2, Shaaban K Mohamed3, Ahmed M M El-Saghier4, Mustafa R Albayati5.   

Abstract

In the title compound, C6H4N4S3, the 1,3,4-thia-diazole ring is essentially planar, with an r.m.s. deviation of 0.001 Å. The two N-C-S-C torsion angles in the mol-ecule are -23.41 (15) and 0.62 (14)°. One aceto-nitrile group is above the plane of the 1,3,4-thia-diazole ring and the other is below it, indicating syn and anti orientations. In the crystal, C-H⋯N hydrogen bonds link the molecules into ribbons along [010].

Entities:  

Year:  2013        PMID: 24454269      PMCID: PMC3885093          DOI: 10.1107/S1600536813032194

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the broad spectrum of biological activities of thia­diazole-containing compounds, see: Padmavathi et al. (2009 ▶); Karegoudar et al. (2008 ▶); Wei et al. (2009 ▶); Gupta et al. (2009 ▶); Pattanayak et al. (2009 ▶); Cressier et al. (2009 ▶).

Experimental

Crystal data

C6H4N4S3 M = 228.34 Monoclinic, a = 8.5305 (7) Å b = 14.2102 (11) Å c = 7.8803 (6) Å β = 104.3810 (11)° V = 925.32 (13) Å3 Z = 4 Mo Kα radiation μ = 0.76 mm−1 T = 150 K 0.24 × 0.08 × 0.06 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.82, T max = 0.96 16625 measured reflections 2450 independent reflections 2155 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.074 S = 1.05 2450 reflections 118 parameters H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXT (Sheldrick, 2008) ▶; program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008) ▶; molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813032194/hg5363sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813032194/hg5363Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813032194/hg5363Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H4N4S3F(000) = 464
Mr = 228.34Dx = 1.639 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9961 reflections
a = 8.5305 (7) Åθ = 2.9–29.1°
b = 14.2102 (11) ŵ = 0.76 mm1
c = 7.8803 (6) ÅT = 150 K
β = 104.3810 (11)°Column, pale gold
V = 925.32 (13) Å30.24 × 0.08 × 0.06 mm
Z = 4
Bruker SMART APEX CCD diffractometer2450 independent reflections
Radiation source: fine-focus sealed tube2155 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
Detector resolution: 8.3660 pixels mm-1θmax = 29.1°, θmin = 2.5°
φ and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −19→19
Tmin = 0.82, Tmax = 0.96l = −10→10
16625 measured reflections
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H-atom parameters constrained
wR(F2) = 0.074 W = 1/[Σ2(FO2) + (0.0348P)2 + 0.4414P] Where P = (FO2 + 2FC2)/3
S = 1.05(Δ/σ)max < 0.001
2450 reflectionsΔρmax = 0.56 e Å3
118 parametersΔρmin = −0.24 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.24557 (4)0.24679 (2)0.77612 (5)0.0199 (1)
S20.35261 (4)0.45127 (3)0.80614 (5)0.0225 (1)
S3−0.02136 (4)0.11179 (3)0.59651 (5)0.0217 (1)
N10.07063 (16)0.38153 (9)0.61222 (18)0.0246 (4)
N2−0.01784 (15)0.29982 (9)0.56140 (18)0.0232 (4)
N30.31454 (18)0.46664 (10)0.33409 (18)0.0286 (4)
N4−0.40861 (18)0.23221 (12)0.5806 (2)0.0370 (5)
C10.20800 (17)0.36440 (10)0.72254 (19)0.0188 (4)
C20.05731 (17)0.22555 (10)0.63639 (18)0.0178 (4)
C30.29143 (18)0.53720 (10)0.6312 (2)0.0223 (4)
C40.30417 (18)0.49844 (10)0.4636 (2)0.0222 (4)
C5−0.20837 (18)0.14204 (11)0.4383 (2)0.0240 (4)
C6−0.32061 (18)0.19370 (11)0.5168 (2)0.0247 (4)
H3A0.178300.556700.622400.0270*
H3B0.361000.593700.659200.0270*
H5A−0.182800.180800.344200.0290*
H5B−0.261400.083600.384200.0290*
U11U22U33U12U13U23
S10.0170 (2)0.0195 (2)0.0210 (2)−0.0004 (1)0.0001 (1)0.0025 (1)
S20.0207 (2)0.0212 (2)0.0224 (2)−0.0041 (1)−0.0007 (1)0.0015 (1)
S30.0205 (2)0.0189 (2)0.0243 (2)−0.0020 (1)0.0029 (1)−0.0006 (1)
N10.0195 (6)0.0210 (6)0.0302 (7)−0.0028 (5)0.0006 (5)0.0037 (5)
N20.0185 (6)0.0212 (6)0.0274 (7)−0.0031 (5)0.0012 (5)0.0025 (5)
N30.0310 (7)0.0273 (7)0.0261 (7)−0.0034 (6)0.0042 (6)0.0016 (6)
N40.0244 (7)0.0490 (9)0.0352 (8)0.0019 (7)0.0031 (6)−0.0032 (7)
C10.0195 (7)0.0175 (6)0.0194 (7)−0.0010 (5)0.0050 (5)0.0017 (5)
C20.0156 (6)0.0217 (7)0.0164 (6)−0.0014 (5)0.0043 (5)0.0004 (5)
C30.0232 (7)0.0173 (7)0.0260 (8)0.0014 (5)0.0051 (6)0.0023 (6)
C40.0202 (7)0.0180 (7)0.0265 (8)−0.0026 (5)0.0025 (6)0.0041 (6)
C50.0233 (7)0.0272 (8)0.0187 (7)−0.0049 (6)0.0000 (5)−0.0028 (6)
C60.0187 (7)0.0299 (8)0.0215 (7)−0.0047 (6)−0.0026 (6)0.0009 (6)
S1—C11.7340 (15)N3—C41.140 (2)
S1—C21.7333 (15)N4—C61.142 (2)
S2—C11.7538 (15)C3—C41.460 (2)
S2—C31.8184 (15)C5—C61.460 (2)
S3—C21.7486 (15)C3—H3A0.9900
S3—C51.8155 (16)C3—H3B0.9900
N1—N21.3885 (19)C5—H5A0.9900
N1—C11.297 (2)C5—H5B0.9900
N2—C21.2984 (19)
C1—S1—C285.82 (7)S3—C5—C6112.64 (11)
C1—S2—C398.35 (7)N4—C6—C5178.33 (17)
C2—S3—C597.88 (7)S2—C3—H3A109.00
N2—N1—C1111.85 (12)S2—C3—H3B109.00
N1—N2—C2112.14 (13)C4—C3—H3A109.00
S1—C1—S2121.11 (9)C4—C3—H3B109.00
S1—C1—N1115.19 (11)H3A—C3—H3B108.00
S2—C1—N1123.63 (11)S3—C5—H5A109.00
S1—C2—S3121.93 (8)S3—C5—H5B109.00
S1—C2—N2114.99 (11)C6—C5—H5A109.00
S3—C2—N2123.07 (11)C6—C5—H5B109.00
S2—C3—C4111.14 (10)H5A—C5—H5B108.00
N3—C4—C3178.79 (16)
C2—S1—C1—S2−177.61 (10)C5—S3—C2—N20.62 (14)
C2—S1—C1—N1−0.51 (12)C2—S3—C5—C6−68.78 (12)
C1—S1—C2—S3179.01 (10)C1—N1—N2—C20.16 (19)
C1—S1—C2—N20.61 (12)N2—N1—C1—S10.32 (17)
C3—S2—C1—S1153.44 (9)N2—N1—C1—S2177.33 (11)
C3—S2—C1—N1−23.41 (15)N1—N2—C2—S1−0.57 (17)
C1—S2—C3—C4−60.50 (12)N1—N2—C2—S3−178.96 (11)
C5—S3—C2—S1−177.66 (9)
D—H···AD—HH···AD···AD—H···A
C3—H3A···N1i0.992.603.407 (2)139
C5—H5B···N3ii0.992.353.267 (2)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3A⋯N1i 0.992.603.407 (2)139
C5—H5B⋯N3ii 0.992.353.267 (2)153

Symmetry codes: (i) ; (ii) .

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