Literature DB >> 24454176

2-[(Ferrocen-1-yl)(hy-droxy)meth-yl]prop-2-ene-nitrile.

S Selvanayagam1, K Ravikumar2, S Kathiravan3, R Raghunathan3.   

Abstract

In the title ferrocene derivative, [Fe(C5H5)(C9H8NO)], the dihedral angle between the ene-nitrile group and the substituted cyclo-penta-dienyl ring is 71.2 (1)°. The cyclopentadienyl rings of the ferrocene moiety are arranged in an eclipsed conformation. The hy-droxy group, and the corresponding methine H atom, are disordered over two sets of sites with site-occupancy factors of 0.744 (4) and 0.256 (4). An intra-molecular C-H⋯O close contact is observed. In the crystal, O-H⋯N hydrogen bonds form a C(6) chain along [100].

Entities:  

Year:  2013        PMID: 24454176      PMCID: PMC3885001          DOI: 10.1107/S1600536813031218

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to ferrocene derivatives, see: Li et al. (2013 ▶); Skiba et al. (2012 ▶); Karolyi et al. (2012 ▶). For related structures, see: Leka et al. (2012a ▶,b ▶).

Experimental

Crystal data

[Fe(C5H5)(C9H8NO)] M = 267.10 Triclinic, a = 7.4317 (15) Å b = 8.0137 (16) Å c = 10.083 (2) Å α = 92.09 (3)° β = 93.81 (3)° γ = 101.09 (3)° V = 587.3 (2) Å3 Z = 2 Mo Kα radiation μ = 1.26 mm−1 T = 292 K 0.22 × 0.20 × 0.18 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer 6351 measured reflections 2683 independent reflections 2481 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.112 S = 1.06 2683 reflections 160 parameters 3 restraints H-atom parameters constrained Δρmax = 0.78 e Å−3 Δρmin = −0.51 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL2013 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813031218/zq2212sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813031218/zq2212Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Fe(C5H5)(C9H8NO)]Z = 2
Mr = 267.10F(000) = 276
Triclinic, P1Dx = 1.511 Mg m3
a = 7.4317 (15) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.0137 (16) ÅCell parameters from 5048 reflections
c = 10.083 (2) Åθ = 2.6–24.8°
α = 92.09 (3)°µ = 1.26 mm1
β = 93.81 (3)°T = 292 K
γ = 101.09 (3)°Block, colourless
V = 587.3 (2) Å30.22 × 0.20 × 0.18 mm
Bruker SMART APEX CCD area-detector diffractometerRint = 0.028
Radiation source: fine-focus sealed tubeθmax = 28.1°, θmin = 2.0°
ω scansh = −9→9
6351 measured reflectionsk = −10→10
2683 independent reflectionsl = −13→13
2481 reflections with I > 2σ(I)
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.112w = 1/[σ2(Fo2) + (0.0721P)2 + 0.143P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2683 reflectionsΔρmax = 0.78 e Å3
160 parametersΔρmin = −0.51 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
Fe10.12344 (3)0.78280 (3)0.68844 (3)0.03652 (14)
O10.1780 (3)1.2232 (3)0.8242 (3)0.0630 (7)0.744 (4)
H10.08081.15760.83340.094*0.744 (4)
O1'0.3410 (9)1.0729 (9)0.9630 (6)0.0630 (7)0.256 (4)
H1'0.42041.01450.96530.094*0.256 (4)
N10.7948 (3)1.1554 (3)0.8583 (3)0.0685 (7)
C1−0.0590 (3)0.7684 (3)0.8309 (2)0.0469 (5)
H1A−0.05330.84940.90700.056*
C2−0.1490 (3)0.7765 (3)0.7047 (3)0.0495 (5)
H2−0.21690.86430.67700.059*
C3−0.1239 (4)0.6360 (4)0.6253 (3)0.0580 (7)
H3−0.17110.60940.53230.070*
C4−0.0192 (4)0.5410 (3)0.7013 (3)0.0592 (7)
H40.01910.43640.67130.071*
C50.0208 (4)0.6227 (3)0.8283 (3)0.0529 (6)
H50.09250.58500.90250.063*
C60.3135 (3)0.9999 (3)0.7279 (2)0.0370 (4)
C70.2271 (3)0.9998 (3)0.5987 (2)0.0500 (6)
H70.15741.08400.56590.060*
C80.2586 (4)0.8557 (4)0.5254 (3)0.0637 (8)
H80.21320.82250.43290.076*
C90.3633 (4)0.7675 (4)0.6070 (3)0.0597 (7)
H90.40430.66250.58170.072*
C100.3985 (3)0.8559 (3)0.7331 (3)0.0467 (5)
H100.46850.82320.81040.056*
C110.3231 (3)1.1352 (3)0.8366 (2)0.0400 (4)
H110.32181.08220.92270.048*0.744 (4)
H11'0.21471.18800.82760.048*0.256 (4)
C120.4964 (3)1.2685 (3)0.8351 (2)0.0438 (5)
C130.6643 (3)1.2065 (3)0.8478 (2)0.0464 (5)
C140.5015 (4)1.4309 (4)0.8248 (4)0.0779 (10)
H14A0.61411.50580.82570.093*
H14B0.39271.47190.81650.093*
U11U22U33U12U13U23
Fe10.02602 (18)0.0411 (2)0.03825 (19)−0.00367 (12)0.00291 (12)0.00018 (12)
O10.0324 (11)0.0528 (13)0.103 (2)0.0050 (9)0.0150 (11)−0.0021 (12)
O1'0.0324 (11)0.0528 (13)0.103 (2)0.0050 (9)0.0150 (11)−0.0021 (12)
N10.0404 (12)0.0762 (16)0.0859 (17)0.0112 (11)−0.0096 (11)−0.0092 (13)
C10.0379 (11)0.0524 (13)0.0459 (12)−0.0047 (10)0.0120 (9)0.0006 (9)
C20.0257 (10)0.0587 (14)0.0610 (14)−0.0013 (9)0.0059 (9)0.0095 (11)
C30.0390 (12)0.0699 (17)0.0520 (13)−0.0194 (11)0.0021 (10)−0.0081 (12)
C40.0482 (14)0.0414 (12)0.0826 (18)−0.0087 (10)0.0201 (13)−0.0034 (12)
C50.0424 (12)0.0532 (14)0.0602 (14)−0.0018 (10)0.0081 (10)0.0183 (11)
C60.0262 (9)0.0397 (10)0.0420 (10)−0.0015 (7)0.0018 (7)0.0044 (8)
C70.0408 (12)0.0600 (14)0.0424 (11)−0.0091 (10)0.0014 (9)0.0140 (10)
C80.0546 (16)0.0820 (19)0.0410 (12)−0.0224 (14)0.0153 (11)−0.0083 (12)
C90.0375 (12)0.0615 (16)0.0745 (18)−0.0049 (11)0.0198 (12)−0.0197 (13)
C100.0261 (9)0.0467 (12)0.0640 (14)0.0007 (8)0.0004 (9)−0.0024 (10)
C110.0301 (10)0.0391 (10)0.0482 (11)−0.0006 (8)0.0059 (8)0.0035 (8)
C120.0311 (10)0.0427 (11)0.0547 (12)0.0002 (8)0.0035 (9)−0.0022 (9)
C130.0321 (11)0.0499 (12)0.0521 (12)−0.0022 (9)−0.0008 (9)−0.0052 (9)
C140.0422 (14)0.0460 (15)0.143 (3)−0.0022 (12)0.0181 (17)0.0090 (17)
Fe1—C62.027 (2)C3—H30.9800
Fe1—C52.029 (2)C4—C51.404 (4)
Fe1—C82.029 (3)C4—H40.9800
Fe1—C102.030 (2)C5—H50.9800
Fe1—C12.031 (2)C6—C71.414 (3)
Fe1—C32.032 (2)C6—C101.419 (3)
Fe1—C72.032 (2)C6—C111.501 (3)
Fe1—C22.033 (2)C7—C81.413 (4)
Fe1—C92.034 (3)C7—H70.9800
Fe1—C42.035 (3)C8—C91.397 (5)
O1—C111.399 (3)C8—H80.9800
O1—H10.8200C9—C101.416 (4)
O1'—C111.394 (6)C9—H90.9800
O1'—H1'0.8200C10—H100.9800
N1—C131.124 (3)C11—C121.508 (3)
C1—C21.408 (4)C11—H110.9800
C1—C51.408 (4)C11—H11'0.9800
C1—H1A0.9800C12—C141.303 (4)
C2—C31.406 (4)C12—C131.429 (3)
C2—H20.9800C14—H14A0.9300
C3—C41.402 (4)C14—H14B0.9300
C6—Fe1—C5124.47 (10)C2—C3—H3125.8
C6—Fe1—C868.46 (10)Fe1—C3—H3125.8
C5—Fe1—C8156.88 (14)C3—C4—C5107.7 (2)
C6—Fe1—C1040.94 (9)C3—C4—Fe169.70 (15)
C5—Fe1—C10107.84 (11)C5—C4—Fe169.54 (15)
C8—Fe1—C1068.20 (12)C3—C4—H4126.2
C6—Fe1—C1107.63 (10)C5—C4—H4126.2
C5—Fe1—C140.59 (11)Fe1—C4—H4126.2
C8—Fe1—C1161.02 (14)C4—C5—C1108.4 (2)
C10—Fe1—C1121.84 (11)C4—C5—Fe170.04 (15)
C6—Fe1—C3157.18 (12)C1—C5—Fe169.80 (14)
C5—Fe1—C367.81 (12)C4—C5—H5125.8
C8—Fe1—C3107.91 (11)C1—C5—H5125.8
C10—Fe1—C3160.59 (12)Fe1—C5—H5125.8
C1—Fe1—C368.06 (11)C7—C6—C10107.8 (2)
C6—Fe1—C740.76 (9)C7—C6—C11125.7 (2)
C5—Fe1—C7161.10 (12)C10—C6—C11126.4 (2)
C8—Fe1—C740.73 (12)C7—C6—Fe169.79 (13)
C10—Fe1—C768.59 (11)C10—C6—Fe169.64 (12)
C1—Fe1—C7124.28 (11)C11—C6—Fe1128.96 (15)
C3—Fe1—C7121.75 (11)C8—C7—C6107.6 (2)
C6—Fe1—C2121.64 (10)C8—C7—Fe169.52 (15)
C5—Fe1—C268.07 (11)C6—C7—Fe169.45 (13)
C8—Fe1—C2124.44 (13)C8—C7—H7126.2
C10—Fe1—C2157.38 (11)C6—C7—H7126.2
C1—Fe1—C240.53 (10)Fe1—C7—H7126.2
C3—Fe1—C240.49 (11)C9—C8—C7108.8 (2)
C7—Fe1—C2107.66 (11)C9—C8—Fe170.09 (15)
C6—Fe1—C968.68 (10)C7—C8—Fe169.75 (14)
C5—Fe1—C9121.88 (13)C9—C8—H8125.6
C8—Fe1—C940.22 (13)C7—C8—H8125.6
C10—Fe1—C940.79 (10)Fe1—C8—H8125.6
C1—Fe1—C9157.44 (13)C8—C9—C10108.0 (2)
C3—Fe1—C9124.04 (11)C8—C9—Fe169.69 (16)
C7—Fe1—C968.38 (12)C10—C9—Fe169.46 (14)
C2—Fe1—C9160.49 (12)C8—C9—H9126.0
C6—Fe1—C4160.96 (12)C10—C9—H9126.0
C5—Fe1—C440.42 (12)Fe1—C9—H9126.0
C8—Fe1—C4121.56 (13)C9—C10—C6107.8 (2)
C10—Fe1—C4124.15 (12)C9—C10—Fe169.75 (14)
C1—Fe1—C468.23 (11)C6—C10—Fe169.42 (12)
C3—Fe1—C440.33 (12)C9—C10—H10126.1
C7—Fe1—C4156.93 (13)C6—C10—H10126.1
C2—Fe1—C468.13 (12)Fe1—C10—H10126.1
C9—Fe1—C4107.59 (12)O1'—C11—C6112.5 (4)
C11—O1—H1109.5O1—C11—C6113.0 (2)
C11—O1'—H1'109.5O1'—C11—C12102.2 (3)
C2—C1—C5107.7 (2)O1—C11—C12105.74 (19)
C2—C1—Fe169.80 (13)C6—C11—C12111.08 (18)
C5—C1—Fe169.61 (14)O1—C11—H11109.0
C2—C1—H1A126.2C6—C11—H11109.0
C5—C1—H1A126.2C12—C11—H11109.0
Fe1—C1—H1A126.2O1'—C11—H11'110.3
C3—C2—C1107.8 (2)C6—C11—H11'110.3
C3—C2—Fe169.71 (15)C12—C11—H11'110.3
C1—C2—Fe169.67 (14)C14—C12—C13119.6 (2)
C3—C2—H2126.1C14—C12—C11124.9 (2)
C1—C2—H2126.1C13—C12—C11115.5 (2)
Fe1—C2—H2126.1N1—C13—C12178.9 (3)
C4—C3—C2108.5 (2)C12—C14—H14A120.0
C4—C3—Fe169.98 (15)C12—C14—H14B120.0
C2—C3—Fe169.81 (14)H14A—C14—H14B120.0
C4—C3—H3125.8
C5—C1—C2—C30.0 (3)C7—C8—C9—Fe159.20 (18)
Fe1—C1—C2—C359.52 (17)C8—C9—C10—C60.1 (3)
C5—C1—C2—Fe1−59.55 (17)Fe1—C9—C10—C6−59.20 (16)
C1—C2—C3—C40.0 (3)C8—C9—C10—Fe159.25 (18)
Fe1—C2—C3—C459.50 (18)C7—C6—C10—C9−0.2 (3)
C1—C2—C3—Fe1−59.49 (16)C11—C6—C10—C9−176.6 (2)
C2—C3—C4—C50.0 (3)Fe1—C6—C10—C959.40 (17)
Fe1—C3—C4—C559.42 (18)C7—C6—C10—Fe1−59.58 (16)
C2—C3—C4—Fe1−59.39 (17)C11—C6—C10—Fe1124.0 (2)
C3—C4—C5—C10.0 (3)C7—C6—C11—O1'153.7 (4)
Fe1—C4—C5—C159.47 (17)C10—C6—C11—O1'−30.5 (4)
C3—C4—C5—Fe1−59.51 (18)Fe1—C6—C11—O1'61.8 (4)
C2—C1—C5—C40.0 (3)C7—C6—C11—O126.2 (3)
Fe1—C1—C5—C4−59.62 (18)C10—C6—C11—O1−158.0 (2)
C2—C1—C5—Fe159.66 (16)Fe1—C6—C11—O1−65.7 (3)
C10—C6—C7—C80.2 (3)C7—C6—C11—C12−92.4 (2)
C11—C6—C7—C8176.7 (2)C10—C6—C11—C1283.3 (3)
Fe1—C6—C7—C8−59.26 (17)Fe1—C6—C11—C12175.68 (15)
C10—C6—C7—Fe159.49 (15)O1'—C11—C12—C14−116.6 (4)
C11—C6—C7—Fe1−124.1 (2)O1—C11—C12—C140.3 (4)
C6—C7—C8—C9−0.2 (3)C6—C11—C12—C14123.2 (3)
Fe1—C7—C8—C9−59.41 (19)O1'—C11—C12—C1362.6 (4)
C6—C7—C8—Fe159.21 (16)O1—C11—C12—C13179.5 (2)
C7—C8—C9—C100.1 (3)C6—C11—C12—C13−57.5 (3)
Fe1—C8—C9—C10−59.11 (18)
D—H···AD—HH···AD···AD—H···A
O1—H1···N1i0.822.152.841 (3)141
C14—H14B···O10.932.312.648 (4)101
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N1i 0.822.152.841 (3)141
C14—H14B⋯O10.932.312.648 (4)101

Symmetry code: (i) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Ferrocenyl bioconjugates of ampicillin and 6-aminopenicillinic acid--synthesis, electrochemistry and biological activity.

Authors:  Joanna Skiba; Aleksandra Rajnisz; Kely Navakoski de Oliveira; Ingo Ott; Jolanta Solecka; Konrad Kowalski
Journal:  Eur J Med Chem       Date:  2012-09-23       Impact factor: 6.514

3.  Antimicrobial activity of a ferrocene-substituted carborane derivative targeting multidrug-resistant infection.

Authors:  Shuihong Li; Zhaojin Wang; Yuanfeng Wei; Changyu Wu; Shengping Gao; Hui Jiang; Xinqing Zhao; Hong Yan; Xuemei Wang
Journal:  Biomaterials       Date:  2012-11-19       Impact factor: 12.479

4.  1-Ferrocenyl-3-(4-methyl-anilino)propan-1-one.

Authors:  Zorica Leka; Sladjana B Novaković; Dragana Stevanović; Goran A Bogdanović; Rastko D Vukićević
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-31

5.  3-Anilino-1-ferrocenylpropan-1-one.

Authors:  Zorica Leka; Sladjana B Novaković; Dragana Stevanović; Goran A Bogdanović; Rastko D Vukićević
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-31

6.  Acylated mono-, bis- and tris- cinchona-based amines containing ferrocene or organic residues: synthesis, structure and in vitro antitumor activity on selected human cancer cell lines.

Authors:  Benedek Imre Károlyi; Szilvia Bösze; Erika Orbán; Pál Sohár; László Drahos; Emese Gál; Antal Csámpai
Journal:  Molecules       Date:  2012-02-24       Impact factor: 4.411

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.