Literature DB >> 24448657

Defining and detecting structural sensitivity in biological models: developing a new framework.

M W Adamson1, A Yu Morozov.   

Abstract

When we construct mathematical models to represent biological systems, there is always uncertainty with regards to the model specification--whether with respect to the parameters or to the formulation of model functions. Sometimes choosing two different functions with close shapes in a model can result in substantially different model predictions: a phenomenon known in the literature as structural sensitivity, which is a significant obstacle to improving the predictive power of biological models. In this paper, we revisit the general definition of structural sensitivity, compare several more specific definitions and discuss their usefulness for the construction and analysis of biological models. Then we propose a general approach to reveal structural sensitivity with regards to certain system properties, which considers infinite-dimensional neighbourhoods of the model functions: a far more powerful technique than the conventional approach of varying parameters for a fixed functional form. In particular, we suggest a rigorous method to unearth sensitivity with respect to the local stability of systems' equilibrium points. We present a method for specifying the neighbourhood of a general unknown function with [Formula: see text] inflection points in terms of a finite number of local function properties, and provide a rigorous proof of its completeness. Using this powerful result, we implement our method to explore sensitivity in several well-known multicomponent ecological models and demonstrate the existence of structural sensitivity in these models. Finally, we argue that structural sensitivity is an important intrinsic property of biological models, and a direct consequence of the complexity of the underlying real systems.

Mesh:

Year:  2014        PMID: 24448657     DOI: 10.1007/s00285-014-0753-3

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  14 in total

1.  Parametric analysis of the ratio-dependent predator-prey model.

Authors:  F Berezovskaya; G Karev; R Arditi
Journal:  J Math Biol       Date:  2001-09       Impact factor: 2.259

2.  Enrichment and foodchain stability: the impact of different forms of predator-prey interaction.

Authors:  Thilo Gross; Wolfgang Ebenhöh; Ulrike Feudel
Journal:  J Theor Biol       Date:  2004-04-07       Impact factor: 2.691

3.  Emergence of Holling type III zooplankton functional response: bringing together field evidence and mathematical modelling.

Authors:  Andrew Yu Morozov
Journal:  J Theor Biol       Date:  2010-04-18       Impact factor: 2.691

4.  How far details are important in ecosystem modelling: the case of multi-limiting nutrients in phytoplankton-zooplankton interactions.

Authors:  J-C Poggiale; M Baklouti; B Queguiner; S A L M Kooijman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-11-12       Impact factor: 6.237

5.  Community response to enrichment is highly sensitive to model structure.

Authors:  Gregor F Fussmann; Bernd Blasius
Journal:  Biol Lett       Date:  2005-03-22       Impact factor: 3.703

6.  Rapid evolution and ecological host-parasite dynamics.

Authors:  Meghan A Duffy; Lena Sivars-Becker
Journal:  Ecol Lett       Date:  2007-01       Impact factor: 9.492

7.  The invisible niche: weakly density-dependent mortality and the coexistence of species.

Authors:  Thilo Gross; Andrew M Edwards; Ulrike Feudel
Journal:  J Theor Biol       Date:  2009-01-31       Impact factor: 2.691

8.  Impacts of incubation delay on the dynamics of an eco-epidemiological system--a theoretical study.

Authors:  N Bairagi; R R Sarkar; J Chattopadhyay
Journal:  Bull Math Biol       Date:  2008-07-31       Impact factor: 1.758

9.  Dynamic energy budgets in syntrophic symbiotic relationships between heterotrophic hosts and photoautotrophic symbionts.

Authors:  Erik B Muller; Sebastiaan A L M Kooijman; Peter J Edmunds; Francis J Doyle; Roger M Nisbet
Journal:  J Theor Biol       Date:  2009-03-12       Impact factor: 2.691

10.  Structural sensitivity of biological models revisited.

Authors:  Flora Cordoleani; Cordoleani Flora; David Nerini; Nerini David; Mathias Gauduchon; Gauduchon Mathias; Andrew Morozov; Morozov Andrew; Jean-Christophe Poggiale; Poggiale Jean-Christophe
Journal:  J Theor Biol       Date:  2011-05-30       Impact factor: 2.691

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  4 in total

1.  Community dynamics and sensitivity to model structure: towards a probabilistic view of process-based model predictions.

Authors:  Clement Aldebert; Daniel B Stouffer
Journal:  J R Soc Interface       Date:  2018-12-05       Impact factor: 4.118

2.  Quantifying uncertainty in partially specified biological models: how can optimal control theory help us?

Authors:  M W Adamson; A Y Morozov; O A Kuzenkov
Journal:  Proc Math Phys Eng Sci       Date:  2016-09       Impact factor: 2.704

Review 3.  Generalized Structural Kinetic Modeling: A Survey and Guide.

Authors:  Jana C Massing; Thilo Gross
Journal:  Front Mol Biosci       Date:  2022-04-29

4.  Bifurcation analysis of the predator-prey model with the Allee effect in the predator.

Authors:  Deeptajyoti Sen; Saktipada Ghorai; Malay Banerjee; Andrew Morozov
Journal:  J Math Biol       Date:  2021-12-30       Impact factor: 2.259

  4 in total

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