Literature DB >> 24443875

Mapping the human toxome by systems toxicology.

Mounir Bouhifd1, Helena T Hogberg, Andre Kleensang, Alexandra Maertens, Liang Zhao, Thomas Hartung.   

Abstract

Toxicity testing typically involves studying adverse health outcomes in animals subjected to high doses of toxicants with subsequent extrapolation to expected human responses at lower doses. The low-throughput of current toxicity testing approaches (which are largely the same for industrial chemicals, pesticides and drugs) has led to a backlog of more than 80,000 chemicals to which human beings are potentially exposed whose potential toxicity remains largely unknown. Employing new testing strategies that employ the use of predictive, high-throughput cell-based assays (of human origin) to evaluate perturbations in key pathways, referred as pathways of toxicity, and to conduct targeted testing against those pathways, we can begin to greatly accelerate our ability to test the vast 'storehouses' of chemical compounds using a rational, risk-based approach to chemical prioritization and provide test results that are more predictive of human toxicity than current methods. The NIH Transformative Research Grant project Mapping the Human Toxome by Systems Toxicology aims at developing the tools for pathway mapping, annotation and validation as well as the respective knowledge base to share this information.
© 2014 Nordic Association for the Publication of BCPT (former Nordic Pharmacological Society).

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Year:  2014        PMID: 24443875      PMCID: PMC4051836          DOI: 10.1111/bcpt.12198

Source DB:  PubMed          Journal:  Basic Clin Pharmacol Toxicol        ISSN: 1742-7835            Impact factor:   4.080


  46 in total

1.  Food for thought...on alternative methods for chemical safety testing.

Authors:  Thomas Hartung
Journal:  ALTEX       Date:  2010       Impact factor: 6.043

2.  A roadmap for the development of alternative (non-animal) methods for systemic toxicity testing.

Authors:  David A Basketter; Harvey Clewell; Ian Kimber; Annamaria Rossi; Bas Blaauboer; Robert Burrier; Mardas Daneshian; Chantra Eskes; Alan Goldberg; Nina Hasiwa; Sebastian Hoffmann; Joanna Jaworska; Thomas B Knudsen; Robert Landsiedel; Marcel Leist; Paul Locke; Gavin Maxwell; James McKim; Emily A McVey; Gladys Ouédraogo; Grace Patlewicz; Olavi Pelkonen; Erwin Roggen; Costanza Rovida; Irmela Ruhdel; Michael Schwarz; Andreas Schepky; Greet Schoeters; Nigel Skinner; Kerstin Trentz; Marian Turner; Philippe Vanparys; James Yager; Joanne Zurlo; Thomas Hartung
Journal:  ALTEX       Date:  2012       Impact factor: 6.043

3.  Bisphenol A induces a rapid activation of Erk1/2 through GPR30 in human breast cancer cells.

Authors:  S Dong; S Terasaka; R Kiyama
Journal:  Environ Pollut       Date:  2010-09-27       Impact factor: 8.071

4.  Systems toxicology.

Authors:  Thomas Hartung; Erwin van Vliet; Joanna Jaworska; Leo Bonilla; Nigel Skinner; Russell Thomas
Journal:  ALTEX       Date:  2012       Impact factor: 6.043

5.  Evidence-based toxicology - the toolbox of validation for the 21st century?

Authors:  Thomas Hartung
Journal:  ALTEX       Date:  2010       Impact factor: 6.043

Review 6.  From alternative methods to a new toxicology.

Authors:  Thomas Hartung
Journal:  Eur J Pharm Biopharm       Date:  2010-12-30       Impact factor: 5.571

7.  Food for Thought ... on mapping the human toxome.

Authors:  Thomas Hartung; Mary McBride
Journal:  ALTEX       Date:  2011       Impact factor: 6.043

8.  Integrated cellular network of transcription regulations and protein-protein interactions.

Authors:  Yu-Chao Wang; Bor-Sen Chen
Journal:  BMC Syst Biol       Date:  2010-03-08

9.  The use of biomarkers of toxicity for integrating in vitro hazard estimates into risk assessment for humans.

Authors:  Bas J Blaauboer; Kim Boekelheide; Harvey J Clewell; Mardas Daneshian; Milou M L Dingemans; Alan M Goldberg; Marjoke Heneweer; Joanna Jaworska; Nynke I Kramer; Marcel Leist; Hasso Seibert; Emanuela Testai; Rob J Vandebriel; James D Yager; Joanne Zurlo
Journal:  ALTEX       Date:  2012       Impact factor: 6.043

10.  Endocrine profiling and prioritization of environmental chemicals using ToxCast data.

Authors:  David M Reif; Matthew T Martin; Shirlee W Tan; Keith A Houck; Richard S Judson; Ann M Richard; Thomas B Knudsen; David J Dix; Robert J Kavlock
Journal:  Environ Health Perspect       Date:  2010-09-08       Impact factor: 9.031

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  16 in total

Review 1.  Developmental neurotoxicity - challenges in the 21st century and in vitro opportunities.

Authors:  Lena Smirnova; Helena T Hogberg; Marcel Leist; Thomas Hartung
Journal:  ALTEX       Date:  2014       Impact factor: 6.043

Review 2.  Applying evolutionary genetics to developmental toxicology and risk assessment.

Authors:  Maxwell C K Leung; Andrew C Procter; Jared V Goldstone; Jonathan Foox; Robert DeSalle; Carolyn J Mattingly; Mark E Siddall; Alicia R Timme-Laragy
Journal:  Reprod Toxicol       Date:  2017-03-04       Impact factor: 3.143

3.  MPTP's pathway of toxicity indicates central role of transcription factor SP1.

Authors:  Alexandra Maertens; Thomas Luechtefeld; Andre Kleensang; Thomas Hartung
Journal:  Arch Toxicol       Date:  2015-04-08       Impact factor: 5.153

4.  Technical guide for applications of gene expression profiling in human health risk assessment of environmental chemicals.

Authors:  Julie A Bourdon-Lacombe; Ivy D Moffat; Michelle Deveau; Mainul Husain; Scott Auerbach; Daniel Krewski; Russell S Thomas; Pierre R Bushel; Andrew Williams; Carole L Yauk
Journal:  Regul Toxicol Pharmacol       Date:  2015-05-02       Impact factor: 3.271

Review 5.  A Tox21 Approach to Altered Epigenetic Landscapes: Assessing Epigenetic Toxicity Pathways Leading to Altered Gene Expression and Oncogenic Transformation In Vitro.

Authors:  Craig L Parfett; Daniel Desaulniers
Journal:  Int J Mol Sci       Date:  2017-06-01       Impact factor: 5.923

Review 6.  Organs-on-chips at the frontiers of drug discovery.

Authors:  Eric W Esch; Anthony Bahinski; Dongeun Huh
Journal:  Nat Rev Drug Discov       Date:  2015-03-20       Impact factor: 84.694

7.  Metabolomic network analysis of estrogen-stimulated MCF-7 cells: a comparison of overrepresentation analysis, quantitative enrichment analysis and pathway analysis versus metabolite network analysis.

Authors:  Alexandra Maertens; Mounir Bouhifd; Liang Zhao; Shelly Odwin-DaCosta; Andre Kleensang; James D Yager; Thomas Hartung
Journal:  Arch Toxicol       Date:  2016-04-02       Impact factor: 5.153

8.  Validation of research trajectory 1 of an Exposome framework: Exposure to benzo(a)pyrene confers enhanced susceptibility to bacterial infection.

Authors:  Ryan S Clark; Samuel T Pellom; Burthia Booker; Aramandla Ramesh; Tongwen Zhang; Anil Shanker; Mark Maguire; Paul D Juarez; Matthews-Juarez Patricia; Michael A Langston; Maureen Y Lichtveld; Darryl B Hood
Journal:  Environ Res       Date:  2016-01-05       Impact factor: 6.498

Review 9.  Perspectives on In Vitro to In Vivo Extrapolations.

Authors:  Thomas Hartung
Journal:  Appl In Vitro Toxicol       Date:  2018-12-08

Review 10.  Panomics for Precision Medicine.

Authors:  Charanjit Sandhu; Alia Qureshi; Andrew Emili
Journal:  Trends Mol Med       Date:  2017-12-05       Impact factor: 15.272

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