Literature DB >> 24419635

Measurement of the intrinsic variability within protein crystals: implications for sample-evaluation and data-collection strategies.

Michael G Bowler1, Matthew W Bowler2.   

Abstract

The advent of micro-focused X-ray beams has led to the development of a number of advanced methods of sample evaluation and data collection. In particular, multiple-position data-collection and helical oscillation strategies are now becoming commonplace in order to alleviate the problems associated with radiation damage. However, intra-crystal and inter-crystal variation means that it is not always obvious on which crystals or on which region or regions of a crystal these protocols should be performed. For the automation of this process for large-scale screening, and to provide an indication of the best strategy for data collection, a metric of crystal variability could be useful. Here, measures of the intrinsic variability within protein crystals are presented and their implications for optimal data-collection strategies are discussed.

Entities:  

Keywords:  automation; macromolecular crystallography; microfocus; sample evaluation

Mesh:

Substances:

Year:  2013        PMID: 24419635      PMCID: PMC3943112          DOI: 10.1107/S2053230X13032007

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  38 in total

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Review 4.  Small is beautiful: protein micro-crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-09-08

6.  The structure and catalytic cycle of a sodium-pumping pyrophosphatase.

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Review 7.  Micro-crystallography comes of age.

Authors:  Janet L Smith; Robert F Fischetti; Masaki Yamamoto
Journal:  Curr Opin Struct Biol       Date:  2012-09-26       Impact factor: 6.809

8.  Inducing phase changes in crystals of macromolecules: status and perspectives for controlled crystal dehydration.

Authors:  Silvia Russi; Douglas H Juers; Juan Sanchez-Weatherby; Erika Pellegrini; Estelle Mossou; V Trevor Forsyth; Julien Huet; Alexandre Gobbo; Franck Felisaz; Raphael Moya; Sean M McSweeney; Stephen Cusack; Florent Cipriani; Matthew W Bowler
Journal:  J Struct Biol       Date:  2011-03-06       Impact factor: 2.867

9.  Optimization of data collection taking radiation damage into account.

Authors:  Gleb P Bourenkov; Alexander N Popov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  The use of workflows in the design and implementation of complex experiments in macromolecular crystallography.

Authors:  Sandor Brockhauser; Olof Svensson; Matthew W Bowler; Max Nanao; Elspeth Gordon; Ricardo M F Leal; Alexander Popov; Matthew Gerring; Andrew A McCarthy; Andy Gotz
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-07-17
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  1 in total

1.  Structural Basis for the Subversion of MAP Kinase Signaling by an Intrinsically Disordered Parasite Secreted Agonist.

Authors:  Erika Pellegrini; Andrés Palencia; Laurence Braun; Ulrike Kapp; Alexandre Bougdour; Hassan Belrhali; Matthew W Bowler; Mohamed-Ali Hakimi
Journal:  Structure       Date:  2016-11-23       Impact factor: 5.006

  1 in total

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