Literature DB >> 24418568

Transmission and evolution of hepatitis C virus in HCV seroconverters in HIV infected subjects.

Chengli Shen1, Phalguni Gupta2, Xiaochuan Xu1, Anwesha Sanyal1, Charles Rinaldo1, Eric Seaberg3, Joseph B Margolick3, Otoniel Martinez-Maza4, Yue Chen5.   

Abstract

HIV/HCV co-infection provides a model to determine the role of immunity on HCV transmission and evolution. In this study HCV transmission and evolution were evaluated in 6 HCV seroconverters in HIV-infected subjects with a wide range of CD4 cell count. The HCV envelope E1/E2 sequences were analyzed for transmission bottleneck, viral diversity/divergence, immune pressure, and mutations of HLA class I/II restricted epitopes. HCV infection started with transmission bottleneck in all HIV-infected individuals. During the 1.0-2.0 years of infection there was a shift of viral quasispecies in majority of the subjects from one to next visit. However, HCV diversity, divergence, mutations in HLA class I/II restricted and virus neutralizing epitopes were similar in all subjects regardless of CD4 cell count at the time of HCV infection. Our results suggest that HCV transmission and evolution in HIV-infected subjects may not be influenced by host CD4 cell count at the time of infection.
© 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CD4 cell count; Evolution; HCV seroconverter; HIV; Transmission

Mesh:

Substances:

Year:  2013        PMID: 24418568      PMCID: PMC4337793          DOI: 10.1016/j.virol.2013.11.001

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  37 in total

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Authors:  Yaron Rotman; T Jake Liang
Journal:  J Virol       Date:  2009-05-06       Impact factor: 5.103

Review 2.  Acute hepatitis C in HIV-positive individuals.

Authors:  Emma Low; Martin Vogel; Jürgen Rockstroh; Mark Nelson
Journal:  AIDS Rev       Date:  2008 Oct-Dec       Impact factor: 2.500

3.  DnaSP v5: a software for comprehensive analysis of DNA polymorphism data.

Authors:  P Librado; J Rozas
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

4.  Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers.

Authors:  Claus Lundegaard; Ole Lund; Morten Nielsen
Journal:  Bioinformatics       Date:  2008-04-14       Impact factor: 6.937

5.  Acceleration of hepatitis C virus envelope evolution in humans is consistent with progressive humoral immune selection during the transition from acute to chronic infection.

Authors:  Lin Liu; Brian E Fisher; Kimberly A Dowd; Jacquie Astemborski; Andrea L Cox; Stuart C Ray
Journal:  J Virol       Date:  2010-03-03       Impact factor: 5.103

6.  Acute hepatitis C in HIV-infected patients: rare spontaneous clearance correlates with weak memory CD4 T-cell responses to hepatitis C virus.

Authors:  Aurélie Schnuriger; Stéphanie Dominguez; Marguerite Guiguet; Sawsan Harfouch; Assia Samri; Zineb Ouazene; Laurence Slama; Anne Simon; Marc-Antoine Valantin; Vincent Thibault; Brigitte Autran
Journal:  AIDS       Date:  2009-10-23       Impact factor: 4.177

7.  Hepatitis C virus infections among HIV-infected men who have sex with men: an expanding epidemic.

Authors:  Anouk T Urbanus; Thijs J van de Laar; Ineke G Stolte; Janke Schinkel; Titia Heijman; Roel A Coutinho; Maria Prins
Journal:  AIDS       Date:  2009-07-31       Impact factor: 4.177

8.  Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing.

Authors:  Jesus F Salazar-Gonzalez; Elizabeth Bailes; Kimmy T Pham; Maria G Salazar; M Brad Guffey; Brandon F Keele; Cynthia A Derdeyn; Paul Farmer; Eric Hunter; Susan Allen; Olivier Manigart; Joseph Mulenga; Jeffrey A Anderson; Ronald Swanstrom; Barton F Haynes; Gayathri S Athreya; Bette T M Korber; Paul M Sharp; George M Shaw; Beatrice H Hahn
Journal:  J Virol       Date:  2008-02-06       Impact factor: 5.103

9.  Selection pressure from neutralizing antibodies drives sequence evolution during acute infection with hepatitis C virus.

Authors:  Kimberly A Dowd; Dale M Netski; Xiao-Hong Wang; Andrea L Cox; Stuart C Ray
Journal:  Gastroenterology       Date:  2009-03-17       Impact factor: 22.682

10.  NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11.

Authors:  Claus Lundegaard; Kasper Lamberth; Mikkel Harndahl; Søren Buus; Ole Lund; Morten Nielsen
Journal:  Nucleic Acids Res       Date:  2008-05-07       Impact factor: 16.971

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  5 in total

1.  Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing.

Authors:  Cynthia K Y Ho; Jayna Raghwani; Sylvie Koekkoek; Richard H Liang; Jan T M Van der Meer; Marc Van Der Valk; Menno De Jong; Oliver G Pybus; Janke Schinkel; Richard Molenkamp
Journal:  J Virol       Date:  2017-02-28       Impact factor: 5.103

2.  HIV-1 and hepatitis C virus selection bottleneck in Chinese people who inject drugs.

Authors:  Fan Li; Liying Ma; Yi Feng; Yuhua Ruan; Jing Hu; Hongshuo Song; Pengtao Liu; Jun Ma; Baolin Rui; Kate Kerpen; Benjamin Scheinfeld; Tuhina Srivastava; David Metzger; Hui Li; Katharine J Bar; Yiming Shao
Journal:  AIDS       Date:  2018-01-28       Impact factor: 4.177

3.  Effect of HIV/HCV Co-Infection on the Protease Evolution of HIV-1B: A Pilot Study in a Pediatric Population.

Authors:  Sara Domínguez-Rodríguez; Patricia Rojas; Carolina Fernández McPhee; Israel Pagán; María Luisa Navarro; José Tomás Ramos; África Holguín
Journal:  Sci Rep       Date:  2018-02-05       Impact factor: 4.379

4.  Quantitative differences between intra-host HCV populations from persons with recently established and persistent infections.

Authors:  Pelin B Icer Baykal; James Lara; Yury Khudyakov; Alex Zelikovsky; Pavel Skums
Journal:  Virus Evol       Date:  2020-12-30

5.  Bottlenecks in the transmission of porcine reproductive and respiratory syndrome virus (PRRSV1) to naïve pigs and the quasi-species variation of the virus during infection in vaccinated pigs.

Authors:  Martí Cortey; Gastón Arocena; Emanuela Pileri; Gerard Martín-Valls; Enric Mateu
Journal:  Vet Res       Date:  2018-10-19       Impact factor: 3.683

  5 in total

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