| Literature DB >> 24416614 |
Abstract
The aim of this work is to select filamentous fungal strains isolated from saw dust, soil, and decaying wood with the potential to produce xylanase and cellulase enzymes. A total of 110 fungi were isolated. Fifty-seven (57) of these fungi were isolated from soil samples, 32 from sawdust, and 19 from decaying wood. Trichoderma and Aspergillus had the highest relative occurrence of 42.6% and 40.8%, respectively. Trichoderma viride Fd18 showed the highest specific activity of 1.30 U mg(-1) protein for xylanase, while the highest cellulase activity of 1.23 U mg(-1) was shown by Trichoderma sp. F4. The isolated fungi demonstrated potential for synthesizing the hydrolytic enzymes.Entities:
Year: 2013 PMID: 24416614 PMCID: PMC3876719 DOI: 10.1155/2013/283423
Source DB: PubMed Journal: ISRN Microbiol
Relative occurrence (%) of fungi isolated from soil, saw dust, and decaying wood.
| Probable identity | Source/occurrence | |||
|---|---|---|---|---|
| Saw dust | Soil | Decaying wood | Total | |
|
| 2 (1.8%)* | 7 (6.4%) | 3 (2.7%) | 12 (10.9%) |
|
| 1 (0.9%) | 1 (0.9%) | — | 2 (1.8%) |
|
| — | 1 (0.9%) | — | 1 (0.9%) |
|
| 7 (6.4%) | 8 (7.3%) | 3 (2.7%) | 18 (16.3%) |
|
| 6 (5.5%) | 4 (3.6%) | 2 (1.8%) | 12 (10.9%) |
|
| 1 (0.9%) | 3 (2.7%) | — | 4 (3.6%) |
|
| 7 (6.4%) | 9 (8.2%) | 6 (5.5%) | 22 (20.0%) |
|
| 1 (0.9%) | 2 (1.8%) | 1 (0.9%) | 4 (3.6%) |
|
| 1 (0.9%) | 3 (2.7%) | — | 4 (3.6%) |
|
| — | 2 (1.8%) | — | 2 (1.8%) |
|
| 5 (4.5%) | 7 (6.4%) | 3 (2.7%) | 15 (13.6%) |
|
| — | 6 (5.5%) | 3 (2.7%) | 9 (8%) |
|
| 1 (0.9%) | 2 (1.8%) | — | 3 (2.7%) |
|
| — | 2 (1.8%) | — | 2 (1.8%) |
|
| ||||
| Total | 32 (29.0%) | 57 (52%) | 21 (19.0%) | 110 (100%) |
*Figure in parenthesis represent the relative occurrence of the fungi in percentages.
Reducing sugar (mg/mL) produced during screening of fungi isolated from decaying logs of wood for cellulase and xylanase production.
| Fungal isolate | Substrate/reducing sugar (mg/mL) | |
|---|---|---|
| Oat-spelt xylan | CMC | |
| FF1 | 0.55 ± 0.00hi | 0.20 ± 0.00gh |
| FF2 | 1.20 ± 0.14a | 0.35 ± 0.07de |
| FF3 | 0.50 ± 0.07i | 0.10 ± 0.00i |
| FF4 | 0.90 ± 0.00bc | 0.30 ± 0.00ef |
| FF5 | 0.65 ± 0.00fgh | 0.28 ± 0.01f |
| FF6 | 1.00 ± 0.14b | 0.15 ± 0.07hi |
| FF7 | 0.90 ± 0.07bc | 0.35 ± 0.00de |
| FF8 | 0.85 ± 0.00cd | 0.30 ± 0.00ef |
| FF9 | 0.90 ± 0.00bc | 0.60 ± 0.03a |
| FF10 | 0.80 ± 0.07cde | 0.40 ± 0.04cd |
| FF11 | 0.85 ± 0.04cd | 0.45 ± 0.07bc |
| FF12 | 1.02 ± 0.03b | 0.40 ± 0.00cd |
| FF13 | 0.35 ± 0.00j | 0.10 ± 0.00i |
| FF14 | 0.75 ± 0.00def | 0.25 ± 0.00fg |
| FF15 | 0.60 ± 0.00ghi | 0.15 ± 0.00hi |
| FF16 | 0.90 ± 0.03bc | 0.50 ± 0.03b |
| FF17 | 0.60 ± 0.01ghi | 0.15 ± 0.03hi |
| FF18 | 0.75 ± 0.03 | 0.35 ± 0.00de |
| FF19 | 0.65 ± 0.00fgh | 0.40 ± 0.01cd |
| FF20 | 0.70 ± 0.01efg | 0.10 ± 0.00i |
| FF21 | 0.85 ± 0.00cd | 0.45 ± 0.00bc |
∗Each value is a mean of two replicates; ± stands for standard deviation among replicates; means followed by different letters within each column differ significantly at P ≤ 0.05; CMC: carboxymethyl cellulose.
Reducing sugar (mg/mL) produced during screening of fungi isolated from saw dust for cellulase and xylanase production.
| Fungal isolate | Substrate/reducing sugar (mg/mL) | |
|---|---|---|
| Oat-spelt xylan | CMC | |
| FD1 | *0.75 ± 0.00gh | 0.35 ± 0.01gh |
| FD2 | 0.90 ± 0.00e | 0.40 ± 0.01fg |
| FD3 | 0.80 ± 0.03fg | 0.40 ± 0.00fg |
| FD4 | 0.90 ± 0.00e | 0.85 ± 0.00a |
| FD5 | 0.33 ± 0.02lm | 0.01 ± 0.01n |
| FD6 | 0.90 ± 0.01e | 0.50 ± 0.01de |
| FD7 | 1.25 ± 0.00bc | 0.85 ± 0.07a |
| FD8 | 0.65 ± 0.00ij | 0.05 ± 0.01mn |
| FD9 | 0.65 ± 0.00ij | 0.25 ± 0.00ij |
| FD10 | 0.85 ± 0.17gh | 0.15 ± 0.00kl |
| FD11 | 0.80 ± 0.00fg | 0.60 ± 0.03c |
| FD12 | 1.20 ± 0.03c | 0.55 ± 0.01cd |
| FD13 | 0.80 ± 0.00fg | 0.40 ± 0.01fg |
| FD14 | 0.70 ± 0.00hi | 0.75 ± 0.03b |
| FD15 | 0.45 ± 0.07k | 0.20 ± 0.03jk |
| FD16 | 1.00 ± 0.00d | 0.35 ± 0.03gh |
| FD17 | 0.75 ± 0.00gh | 0.35 ± 0.00gh |
| FD18 | 1.30 ± 0.00ab | 0.85 ± 0.07a |
| FD19 | 0.60 ± 0.00j | 0.35 ± 0.00gh |
| FD20 | 0.50 ± 0.01k | 0.10 ± 0.00lm |
| FD21 | 0.75 ± 0.06gh | 0.30 ± 0.01hi |
| FD22 | 0.65 ± 0.65ij | 0.30 ± 0.00hi |
| FD23 | 1.00 ± 0.00d | 0.10 ± 0.00lm |
| FD24 | 0.70 ± 0.00hi | 0.05 ± 0.00mn |
| FD25 | 1.00 ± 0.00d | 0.10 ± 0.00lm |
| FD26 | 1.35 ± 0.00a | 0.70 ± 0.00b |
| FD27 | 0.85 ± 0.03ef | 0.45 ± 0.00ef |
| FD28 | 0.15 ± 0.00n | 0.10 ± 0.00lm |
| FD29 | 0.25 ± 0.00m | 0.10 ± 0.00lm |
| FD30 | 0.35 ± 0.01l | 0.15 ± 0.07kl |
| FD31 | 0.75 ± 0.01gh | 0.30 ± 0.04hi |
| FD32 | 0.85 ± 0.07ef | 0.28 ± 0.04i |
*Each value is a mean of two replicates; ± stands for standard deviation among replicates; means followed by different letters within each column differ significantly at P ≤ 0.05; CMC: carboxymethyl cellulose.
Reducing sugar (mg/mL) produced during screening of fungi isolated from soil for cellulase and xylanase production.
| Fungal isolate | Substrate/reducing sugar (mg/mL) | |
|---|---|---|
| Oat-spelt xylan | CMC | |
| FS1 | *0.30 ± 0.00k | 0.05 ± 0.00k |
| FS2 | 0.70 ± 0.00gh | 0.20 ± 0.00hi |
| FS3 | 1.30 ± 0.07a | 0.35 ± 0.03ef |
| FS4 | 0.10 ± 0.00m | 0.15 ± 0.04ij |
| FS5 | 0.90 ± 0.03cde | 0.30 ± 0.01fg |
| FS6 | 0.94 ± 0.04cd | 0.35 ± 0.01ef |
| FS7 | 1.15 ± 0.21b | 0.45 ± 0.00cd |
| FS8 | 0.80 ± 0.00efg | 0.25 ± 0.01gh |
| FS9 | 0.70 ± 0.00gh | 0.40 ± 0.00de |
| FS10 | 1.00 ± 0.00c | 0.45 ± 0.00cd |
| FS11 | 0.85 ± 0.07 | 0.30 ± 0.04fg |
| FS12 | 0.60 ± 0.00hi | 0.20 ± 0.00hi |
| FS13 | 0.85 ± 0.06 | 0.35 ± 0.03ef |
| FS14 | 0.55 ± 0.00i | 0.15 ± 0.00ij |
| FS15 | 0.40 ± 0.00j | 0.20 ± 0.07hi |
| FS16 | 0.20 ± 0.00l | 0.15 ± 0.03ij |
| FS17 | 0.10 ± 0.03m | 0.05 ± 0.00k |
| FS18 | 0.50 ± 0.00ij | 0.10 ± 0.00jk |
| FS19 | 0.50 ± 0.00ij | 0.10 ± 0.01jk |
| FS20 | 0.95 ± 0.07cd | 0.30 ± 0.00fg |
| FS21 | 0.95 ± 0.00cd | 0.20 ± 0.03hi |
| FS22 | 0.90 ± 0.00cde | 0.45 ± 0.07cd |
| FS23 | 0.55 ± 0.03i | 0.15 ± 0.03ij |
| FS24 | 0.70 ± 0.00gh | 0.20 ± 0.00hi |
| FS25 | 0.80 ± 0.01efg | 0.35 ± 0.00ef |
| FS26 | 0.50 ± 0.00ij | 0.35 ± 0.04ef |
| FS27 | 0.80 ± 0.00efg | 0.35 ± 0.03ef |
| FS28 | 0.60 ± 0.00hi | 0.20 ± 0.00hi |
| FS29 | 0.70 ± 0.03gh | 0.25 ± 0.00gh |
| FS30 | 0.80 ± 0.01efg | 0.40 ± 0.03de |
| FS31 | 0.60 ± 0.00hi | 0.30 ± 0.03fg |
| FS32 | 0.75 ± 0.00fg | 0.65 ± 0.07a |
| FS33 | 0.70 ± 0.01gh | 0.30 ± 0.03fg |
| FS34 | 1.20 ± 0.14b | 0.55 ± 0.00b |
| FS35 | 1.00 ± 0.00c | 0.10 ± 0.00jk |
| FS36 | 0.40 ± 0.00j | 0.35 ± 0.00ef |
| FS37 | 0.70 ± 0.00gh | 0.35 ± 0.00ef |
| FS38 | 0.50 ± 0.03ij | 0.10 ± 0.00jk |
| FS39 | 0.90 ± 0.00cde | 0.55 ± 0.03b |
| FS40 | 0.75 ± 0.00fg | 0.25 ± 0.00gh |
| FS41 | 0.70 ± 0.00gh | 0.50 ± 0.01bc |
| FS42 | 0.60 ± 0.00hi | 0.40 ± 0.03de |
| FS43 | 0.50 ± 0.03ij | 0.20 ± 0.03hi |
| FS44 | 0.70 ± 0.00gh | 0.10 ± 0.00jk |
| FS45 | 0.35 ± 0.00l | 0.40 ± 0.00fg |
| FS46 | 0.75 ± 0.00gh | 0.10 ± 0.00lm |
| FS47 | 0.75 ± 0.03c | 0.60 ± 0.00bc |
| FS48 | 1.20 ± 0.00a | 0.75 ± 0.00a |
| FS49 | 0.60 ± 0.00de | 0.50 ± 0.00bc |
| FS50 | 1.00 ± 0.01b | 0.30 ± 0.00fg |
| FS51 | 0.50 ± 0.07f | 0.55 ± 0.14b |
| FS52 | 0.65 ± 0.00d | 0.15 ± 0.07ij |
| FS53 | 0.50 ± 0.00f | 0.50 ± 0.00bc |
| FS54 | 0.55 ± 0.03ef | 0.30 ± 0.14fg |
| FS55 | 0.20 ± 0.00h | 0.50 ± 0.00bc |
| FS56 | 0.65 ± 0.03d | 0.10 ± 0.00lm |
| FB57 | 0.35 ± 0.00g | 0.30 ± 0.00c |
*Each value is a mean of two replicates; ± stands for standard deviation among replicates; means followed by different letters within each column differ significantly at P ≤ 0.05; CMC: carboxymethyl cellulose.
Specific activities of xylanase produced by fungal isolates.
| Fungal isolates | Xylanase (U mL−1) | Protein (mg mL−1) | Specific activity (U mg−1 protein) |
|---|---|---|---|
| FS3 | *338 ± 2.83ab | 380 ± 0.00dc | 0.89 ± 0.00 |
| FS7 | 300 ± 8.28dc | 310 ± 4.14de | 0.97 ± 0.01cd |
| FS10 | 260 ± 0.00e | 400 ± 13.14 | 0.65 ± 0.03h |
| FS34 | 312 ± 6.97bcd | 420 ± 8.28abc | 0.74 ± 0.00g |
| FS35 | 260 ± 2.43de | 288 ± 1.31e | 0.90 ± 0.01def |
| FD7 | 330 ± 7.07abc | 270 ± 7.07e | 1.22 ± 0.01a |
| FD12 | 312 ± 6.97bcd | 288 ± 8.28e | 1.08 ± 0.03b |
| FD16 | 260 ± 4.14e | 305 ± 1.21de | 0.85 ± 0.03ef |
| FD18 | 338 ± 1.31ab | 261 ± 4.14e | 1.30 ± 0.03a |
| FD23 | 260 ± 4.14e | 282 ± 5.66e | 0.94 ± 0.03de |
| FD25 | 260 ± 7.07e | 410 ± 0.00abc | 0.63 ± 0.01h |
| FD26 | 352 ± 4.14a | 400 ± 7.07 | 0.88 ± 0.11 |
| FF2 | 312 ± 0.00bcd | 460 ± 1.21ab | 0.68 ± 0.03gh |
| FF6 | 260 ± 2.83e | 480 ± 9.90a | 0.54 ± 0.03i |
| FF12 | 265.2 ± 0.00e | 395 ± 7.07bc | 0.67 ± 0.03gh |
| FS48 | 318 ± 8.49abcd | 298 ± 2.83e | 1.05 ± 0.07bc |
| FS50 | 260 ± 0.00e | 310 ± 2.83de | 0.84 ± 0.03f |
*Each value is a mean of two replicates; ± stands for standard deviation among replicates; means followed by different letters within each column differ significantly at P ≤ 0.05.
Specific activities of cellulase produced by fungal isolates.
| Fungal isolates | Cellulase (U mL−1) | Protein (mg mL−1) | Specific activity (U mg−1 protein) |
|---|---|---|---|
| FS48 | *195 ± 2.83b | 298 ± 2.83a | 0.65 ± 0.01cd |
| FD4 | 221 ± 0.00a | 180 ± 2.83d | 1.23 ± 0.01a |
| FD7 | 221 ± 2.83a | 260 ± 2.83b | 0.85 ± 0.04b |
| FD11 | 156 ± 8.49c | 210 ± 2.83c | 0.74 ± 0.01c |
| FD14 | 195 ± 7.07b | 270 ± 2.83b | 0.72 ± 0.03c |
| FD18 | 221 ± 8.49b | 261 ± 8.49b | 0.85 ± 0.07b |
| FD26 | 182 ± 2.83b | 298 ± 3.83a | 0.61 ± 0.01d |
*Each value is a mean of two replicates; ± stands for standard deviation among replicates; means followed by different letters within each column differ significantly at P ≤ 0.05.