Literature DB >> 24415470

DNA extraction from herbarium specimens.

Lenka Záveská Drábková1.   

Abstract

With the expansion of molecular techniques, the historical collections have become widely used. Studying plant DNA using modern molecular techniques such as DNA sequencing plays an important role in understanding evolutionary relationships, identification through DNA barcoding, conservation status, and many other aspects of plant biology. Enormous herbarium collections are an important source of material especially for specimens from areas difficult to access or from taxa that are now extinct. The ability to utilize these specimens greatly enhances the research. However, the process of extracting DNA from herbarium specimens is often fraught with difficulty related to such variables as plant chemistry, drying method of the specimen, and chemical treatment of the specimen. Although many methods have been developed for extraction of DNA from herbarium specimens, the most frequently used are modified CTAB and DNeasy Plant Mini Kit protocols. Nine selected protocols in this chapter have been successfully used for high-quality DNA extraction from different kinds of plant herbarium tissues. These methods differ primarily with respect to their requirements for input material (from algae to vascular plants), type of the plant tissue (leaves with incrustations, sclerenchyma strands, mucilaginous tissues, needles, seeds), and further possible applications (PCR-based methods or microsatellites, AFLP).

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Year:  2014        PMID: 24415470     DOI: 10.1007/978-1-62703-767-9_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

1.  Isolation and Purification of DNA from Complicated Biological Samples.

Authors:  Ruslan Kalendar; Svetlana Boronnikova; Mervi Seppänen
Journal:  Methods Mol Biol       Date:  2021

2.  A protocol for obtaining DNA barcodes from plant and insect fragments isolated from forensic-type soils.

Authors:  Kelly A Meiklejohn; Megan L Jackson; Libby A Stern; James M Robertson
Journal:  Int J Legal Med       Date:  2018-02-08       Impact factor: 2.686

3.  Analyses on Flavonoids and Transcriptome Reveals Key MYB Gene for Proanthocyanidins Regulation in Onobrychis Viciifolia.

Authors:  Zhongzhiyue Jin; Wenbo Jiang; Yijing Luo; Haijun Huang; Dengxia Yi; Yongzhen Pang
Journal:  Front Plant Sci       Date:  2022-06-24       Impact factor: 6.627

4.  Ancient DNA extraction methods for herbarium specimens: When is it worth the effort?

Authors:  Pia Marinček; Natascha D Wagner; Salvatore Tomasello
Journal:  Appl Plant Sci       Date:  2022-06-15       Impact factor: 2.511

Review 5.  The Promise of Molecular and Genomic Techniques for Biodiversity Research and DNA Barcoding of the Arabian Peninsula Flora.

Authors:  Kareem A Mosa; Sanjay Gairola; Rahul Jamdade; Ali El-Keblawy; Khawla Ibrahim Al Shaer; Eman Khalid Al Harthi; Hatem A Shabana; Tamer Mahmoud
Journal:  Front Plant Sci       Date:  2019-01-21       Impact factor: 5.753

6.  All that is gold does not glitter? Age, taxonomy, and ancient plant DNA quality.

Authors:  JinHee Choi; HyeJi Lee; Alexey Shipunov
Journal:  PeerJ       Date:  2015-07-23       Impact factor: 2.984

  6 in total

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