Literature DB >> 24388790

Regulation of transcription factor activity by interconnected post-translational modifications.

Theresa M Filtz1, Walter K Vogel2, Mark Leid3.   

Abstract

Transcription factors comprise just over 7% of the human proteome and serve as gatekeepers of cellular function, integrating external signal information into gene expression programs that reconfigure cellular physiology at the most basic levels. Surface-initiated cell signaling pathways converge on transcription factors, decorating these proteins with an array of post-translational modifications (PTMs) that are often interdependent, being linked in time, space, and combinatorial function. These PTMs orchestrate every activity of a transcription factor over its entire lifespan--from subcellular localization to protein-protein interactions, sequence-specific DNA binding, transcriptional regulatory activity, and protein stability--and play key roles in the epigenetic regulation of gene expression. The multitude of PTMs of transcription factors also offers numerous potential points of intervention for development of therapeutic agents to treat a wide spectrum of diseases. We review PTMs most commonly targeting transcription factors, focusing on recent reports of sequential and linked PTMs of individual factors.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24388790      PMCID: PMC3954851          DOI: 10.1016/j.tips.2013.11.005

Source DB:  PubMed          Journal:  Trends Pharmacol Sci        ISSN: 0165-6147            Impact factor:   14.819


  88 in total

Review 1.  Regulation of transcription factor function by phosphorylation.

Authors:  A J Whitmarsh; R J Davis
Journal:  Cell Mol Life Sci       Date:  2000-08       Impact factor: 9.261

2.  Coordinated regulation of transcription factor Bcl11b activity in thymocytes by the mitogen-activated protein kinase (MAPK) pathways and protein sumoylation.

Authors:  Ling-juan Zhang; Walter K Vogel; Xiao Liu; Acharawan Topark-Ngarm; Brian L Arbogast; Claudia S Maier; Theresa M Filtz; Mark Leid
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

3.  The folding energy landscape and phosphorylation: modeling the conformational switch of the NFAT regulatory domain.

Authors:  Tongye Shen; Chenghang Zong; Donald Hamelberg; J Andrew McCammon; Peter G Wolynes
Journal:  FASEB J       Date:  2005-09       Impact factor: 5.191

Review 4.  Concepts in sumoylation: a decade on.

Authors:  Ruth Geiss-Friedlander; Frauke Melchior
Journal:  Nat Rev Mol Cell Biol       Date:  2007-12       Impact factor: 94.444

Review 5.  The fast-growing business of SUMO chains.

Authors:  Helle D Ulrich
Journal:  Mol Cell       Date:  2008-11-07       Impact factor: 17.970

Review 6.  Transcriptional regulation by calcium, calcineurin, and NFAT.

Authors:  Patrick G Hogan; Lin Chen; Julie Nardone; Anjana Rao
Journal:  Genes Dev       Date:  2003-09-15       Impact factor: 11.361

7.  Regulation of MEF2 by histone deacetylase 4- and SIRT1 deacetylase-mediated lysine modifications.

Authors:  Xuan Zhao; Thomas Sternsdorf; Timothy A Bolger; Ronald M Evans; Tso-Pang Yao
Journal:  Mol Cell Biol       Date:  2005-10       Impact factor: 4.272

Review 8.  ABL tyrosine kinases: evolution of function, regulation, and specificity.

Authors:  John Colicelli
Journal:  Sci Signal       Date:  2010-09-14       Impact factor: 8.192

9.  Tunable signal processing through modular control of transcription factor translocation.

Authors:  Nan Hao; Bogdan A Budnik; Jeremy Gunawardena; Erin K O'Shea
Journal:  Science       Date:  2013-01-25       Impact factor: 47.728

10.  SUMOhydro: a novel method for the prediction of sumoylation sites based on hydrophobic properties.

Authors:  Yong-Zi Chen; Zhen Chen; Yu-Ai Gong; Guoguang Ying
Journal:  PLoS One       Date:  2012-06-14       Impact factor: 3.240

View more
  73 in total

1.  Opening a SWATH Window on Posttranslational Modifications: Automated Pursuit of Modified Peptides.

Authors:  Andrew Keller; Samuel L Bader; Ulrike Kusebauch; David Shteynberg; Leroy Hood; Robert L Moritz
Journal:  Mol Cell Proteomics       Date:  2015-12-24       Impact factor: 5.911

2.  Gene regulatory network reconstruction using single-cell RNA sequencing of barcoded genotypes in diverse environments.

Authors:  Christopher A Jackson; Dayanne M Castro; Richard Bonneau; David Gresham; Giuseppe-Antonio Saldi
Journal:  Elife       Date:  2020-01-27       Impact factor: 8.140

3.  Protein Kinase C-Mediated Phosphorylation of BCL11B at Serine 2 Negatively Regulates Its Interaction with NuRD Complexes during CD4+ T-Cell Activation.

Authors:  Marion Dubuissez; Ingrid Loison; Sonia Paget; Han Vorng; Saliha Ait-Yahia; Olivier Rohr; Anne Tsicopoulos; Dominique Leprince
Journal:  Mol Cell Biol       Date:  2016-06-15       Impact factor: 4.272

Review 4.  Phosphorylation regulates the activity of INDETERMINATE-DOMAIN (IDD/BIRD) proteins in response to diverse environmental conditions.

Authors:  Ronny Völz; Naganand Rayapuram; Heribert Hirt
Journal:  Plant Signal Behav       Date:  2019-07-17

Review 5.  A conserved role for transcription factor sumoylation in binding-site selection.

Authors:  Emanuel Rosonina
Journal:  Curr Genet       Date:  2019-05-15       Impact factor: 3.886

6.  Chromatin Association of Gcn4 Is Limited by Post-translational Modifications Triggered by its DNA-Binding in Saccharomyces cerevisiae.

Authors:  Akhi Akhter; Emanuel Rosonina
Journal:  Genetics       Date:  2016-10-21       Impact factor: 4.562

7.  Nuclear FAK and Runx1 Cooperate to Regulate IGFBP3, Cell-Cycle Progression, and Tumor Growth.

Authors:  Marta Canel; Adam Byron; Andrew H Sims; Jessy Cartier; Hitesh Patel; Margaret C Frame; Valerie G Brunton; Bryan Serrels; Alan Serrels
Journal:  Cancer Res       Date:  2017-08-14       Impact factor: 12.701

8.  Estimating the Distribution of Protein Post-Translational Modification States by Mass Spectrometry.

Authors:  Philip D Compton; Neil L Kelleher; Jeremy Gunawardena
Journal:  J Proteome Res       Date:  2018-07-10       Impact factor: 4.466

Review 9.  A potential role for genome structure in the translation of mechanical force during immune cell development.

Authors:  Elsie Jacobson; Jo K Perry; David S Long; Mark H Vickers; Justin M O'Sullivan
Journal:  Nucleus       Date:  2016-09-27       Impact factor: 4.197

Review 10.  Vertebrate GAF/ThPOK: emerging functions in chromatin architecture and transcriptional regulation.

Authors:  Avinash Srivastava; Amitha Sampath Kumar; Rakesh K Mishra
Journal:  Cell Mol Life Sci       Date:  2017-08-30       Impact factor: 9.261

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.