Literature DB >> 2438657

Characterization of a cDNA clone coding for a sea urchin histone H2A variant related to the H2A.F/Z histone protein in vertebrates.

S G Ernst, H Miller, C A Brenner, C Nocente-McGrath, S Francis, R McIsaac.   

Abstract

A cDNA clone coding for a sea urchin histone H2A variant has been isolated. The coding region of the clone has been sequenced and the sequence found to be closely related to the H2A.F sequence in chickens. The nucleotide sequence of the sea urchin H2A.F/Z is 74% conserved when compared to chicken H2A.F and 51% conserved compared to sea urchin H2A early and 60% compared to sea urchin H2A late. The nucleotide-derived amino acid comparisons show that H2A.F/Z is 97% homologous with H2A.F in chickens and 57% and 56% homologous when compared to sea urchin H2A early and late respectively. There are between 3-6 copies of the H2A.F/Z sequence in the S. purpuratus genome. The H2A.F/Z gene sequence codes for the previously identified H2A.Z protein. All embryonic stages and adult tissues tested contain mRNA for H2A.F/Z. The mRNA appears in the poly A+ RNA fraction after chromatography over oligo dT cellulose.

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Year:  1987        PMID： 2438657      PMCID： PMC340885          DOI： 10.1093/nar/15.11.4629

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  30 in total

1.  Cell-free translation analysis of messenger RNA in echinoderm and amphibian early development.

Authors:  J V Ruderman; M L Pardue
Journal:  Dev Biol       Date:  1977-10-01       Impact factor: 3.582

Review 2.  More histone structures.

Authors:  C Von Holt; W N Strickland; W F Brandt; M S Strickland
Journal:  FEBS Lett       Date:  1979-04-15       Impact factor: 4.124

3.  3' non-coding region sequences in eukaryotic messenger RNA.

Authors:  N J Proudfoot; G G Brownlee
Journal:  Nature       Date:  1976-09-16       Impact factor: 49.962

4.  Simultaneous synthesis, translation, and storage of mRNA including histone mRNA in sea urchin eggs.

Authors:  B P Brandhorst
Journal:  Dev Biol       Date:  1980-09       Impact factor: 3.582

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

Review 6.  Nucleosome structure.

Authors:  J D McGhee; G Felsenfeld
Journal:  Annu Rev Biochem       Date:  1980       Impact factor: 23.643

7.  The DNA sequence of sea urchin (S. purpuratus) H2A, H2B and H3 histone coding and spacer regions.

Authors:  I Sures; J Lowry; L H Kedes
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

8.  Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose.

Authors:  H Aviv; P Leder
Journal:  Proc Natl Acad Sci U S A       Date:  1972-06       Impact factor: 11.205

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.

Authors:  J M Chirgwin; A E Przybyla; R J MacDonald; W J Rutter
Journal:  Biochemistry       Date:  1979-11-27       Impact factor: 3.162
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  22 in total

Review 1.  Growth regulation of human variant histone genes and acetylation of the encoded proteins.

Authors:  D Alvelo-Ceron; L Niu; D G Collart
Journal:  Mol Biol Rep       Date:  2000-06       Impact factor: 2.316

2.  Conservation of intron position indicates separation of major and variant H2As is an early event in the evolution of eukaryotes.

Authors:  A van Daal; E M White; S C Elgin; M A Gorovsky
Journal:  J Mol Evol       Date:  1990-05       Impact factor: 2.395

3.  A comprehensive compilation and alignment of histones and histone genes.

Authors:  D Wells; C McBride
Journal:  Nucleic Acids Res       Date:  1989       Impact factor: 16.971

4.  H2A.Z has a function reminiscent of an activator required for preferential binding to intergenic DNA.

Authors:  Marc Larochelle; Luc Gaudreau
Journal:  EMBO J       Date:  2003-09-01       Impact factor: 11.598

5.  A genomic clone encoding a novel proliferation-dependent histone H2A.1 mRNA enriched in the poly(A)+ fraction.

Authors:  L Fecker; P Ekblom; M Kurkinen; M Ekblom
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

6.  The five cleavage-stage (CS) histones of the sea urchin are encoded by a maternally expressed family of replacement histone genes: functional equivalence of the CS H1 and frog H1M (B4) proteins.

Authors:  B Mandl; W F Brandt; G Superti-Furga; P G Graninger; M L Birnstiel; M Busslinger
Journal:  Mol Cell Biol       Date:  1997-03       Impact factor: 4.272

7.  Sequence and properties of the message encoding Tetrahymena hv1, a highly evolutionarily conserved histone H2A variant that is associated with active genes.

Authors:  E M White; D L Shapiro; C D Allis; M A Gorovsky
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

8.  Analysis of a histone H2A variant from fission yeast: evidence for a role in chromosome stability.

Authors:  A M Carr; S M Dorrington; J Hindley; G A Phear; S J Aves; P Nurse
Journal:  Mol Gen Genet       Date:  1994-12-01

9.  Either of the major H2A genes but not an evolutionarily conserved H2A.F/Z variant of Tetrahymena thermophila can function as the sole H2A gene in the yeast Saccharomyces cerevisiae.

Authors:  X Liu; J Bowen; M A Gorovsky
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

10.  Quantitative developmental transcriptomes of the sea urchin Strongylocentrotus purpuratus.

Authors:  Qiang Tu; R Andrew Cameron; Eric H Davidson
Journal:  Dev Biol       Date:  2013-11-26       Impact factor: 3.582
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