| Literature DB >> 24386569 |
Ganna Chornokur1, Ernest K Amankwah2, Stacy N Davis3, Catherine M Phelan1, Jong Y Park2, Julio Pow-Sang4, Nagi B Kumar1.
Abstract
Background. Prostate cancer (PCa) racial disparity is multifactorial, involving biological, sociocultural, and lifestyle determinants. We investigated the association between selected potentially functional polymorphisms (SNPs) and prostate cancer (PCa) risk in Black (AAM) and White (EAM) men. We further explored if these associations varied by the body mass index (BMI) and height. Methods. Age-matched DNA samples from 259 AAM and 269 EAM were genotyped for 10 candidate SNPs in 7 genes using the TaqMan allelic differentiation analysis. The dominant, recessive, and additive age-adjusted unconditional logistic regression models were fitted. Results. Three SNPs showed statistically significant associations with PCa risk: in AAM, HNF1B rs7501939 (OR = 2.42, P = 0.0046) and rs4430796 (OR = 0.57, P = 0.0383); in EAM, CTBP2 rs4962416 (OR = 1.52, P = 0.0384). In addition, high BMI in AAM (OR = 1.06, P = 0.022) and height in EAM (OR = 0.92, P = 0.0434) showed significant associations. Interestingly, HNF1B rs7501939 was associated with PCa exclusively in obese AAM (OR = 2.14, P = 0.0103). Conclusion. Our results suggest that variation in the HNF1B may influence PCa risk in obese AAM.Entities:
Year: 2013 PMID: 24386569 PMCID: PMC3872424 DOI: 10.1155/2013/384594
Source DB: PubMed Journal: Prostate Cancer ISSN: 2090-312X
Selected characteristics of the study participants by case/control status.
| AAM: 259 total | EAM: 269 total | Total sample combined | ||||
|---|---|---|---|---|---|---|
| No. of cases (%) | No. of controls (%) | No. of cases (%) | No. of controls (%) | No. of cases (%) | No. of controls (%) | |
| Age | ||||||
| <50 | 11 (8) | 12 (8) | 19 (16) | 30 (24) | 30 (12) | 42 (16) |
| 50–64 | 74 (54) | 80 (54) | 85 (70) | 73 (59) | 159 (62) | 153 (56.5) |
| ≥65 | 51 (38) | 55 (38) | 18 (14) | 17 (14) | 69 (26) | 72 (26) |
| Missing | NA | NA | NA | 3 (3) | NA | 3 (1.5) |
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| BMI | ||||||
| ≤24.9 normal weight | 9 (7) | 25 (17) | 28 (23) | 26 (21) | 37 (15) | 51 (19) |
| 25.0–29.9 overweight | 47 (34.5) | 70 (48) | 47 (38) | 46 (37) | 94 (36) | 116 (42.5) |
| ≥30.0 obese | 71 (52) | 48 (33) | 46 (38) | 51 (42) | 58.5 (45) | 49.5 (37.5) |
| Missing | 9 (6.5) | 4 (2) | 1 (1) | NA | 10 (3.5) | 4 (1) |
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| Height | ||||||
| ≤67 | 30 (22) | 26 (17.5) | 22 (18) | 21 (17) | 52 (20) | 47 (17) |
| 68–72 | 65 (48) | 98 (66.5) | 79 (65) | 74 (60) | 144 (56.5) | 172 (63) |
| ≥73 | 32 (23.5) | 19 (13) | 21 (17) | 28 (23) | 53 (20) | 47 (18) |
| Missing | 9 (6.5) | 4 (3) | NA | NA | 9 (3) | 4 (1.5) |
Age-adjusted odds ratios (OR) and 95% confidence intervals (95% CI) for PCa in AAM and EAM and combined.
| Rs# and gene; minor allele and its frequency | Dominant model | Recessive model | Additive model |
|---|---|---|---|
| rs4612601; EPHB2 | AAM: 1.09 (0.63–1.9); 0.749 | 0.86 (0.46–1.61); 0.638 | 0.99 (0.69–1.41); 0.951 |
| EAM: 1.18 (0.67–2.10); 0.564 | 0.9 (0.52–1.56); 0.709 | 1.02 (0.73–1.43); 0.912 | |
| All: 1.13 (0.76–1.69); 0.537 | 0.89 (0.59–1.34); 0.565 | 1.00 (0.79–1.28); 0.969 | |
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| rs4263970; EPHB2 | AAM: 0.98 (0.57–1.68); 0.932 | 0.88 (0.44–1.75); 0.711 | 0.95 (0.66–1.38); 0.797 |
| EAM: 1.08 (0.61–1.9); 0.795 | 0.76 (0.44–1.33); 0.334 | 0.93 (0.66–1.30); 0.665 | |
| All: 1.02 (0.69–1.5); 0.918 | 0.81 (0.53–1.25); 0.343 | 0.94 (0.73–1.21); 0.630 | |
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| rs822396; ADIPOQ | AAM: 0.89 (0.52–1.52); 0.671 | 1.64 (0.37–7.21); 0.511 | 0.96 (0.6–1.54); 0.878 |
| EAM: 0.75 (0.44–1.27); 0.288 | 1.1 (0.29–4.09); 0.094 | 0.82 (0.53–1.29); 0.392 | |
| All: 0.82 (0.56–1.19); 0.285 | 1.29 (0.49–3.48); 0.601 | 0.88 (0.64–1.22); 0.456 | |
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| rs10993994; MSMB | AAM: 0.82 (0.48–1.4); 0.472 | 1.04 (0.51–2.10); 0.919 | 0.92 (0.63–1.33); 0.657 |
| EAM: 1.04 (0.54–2.00); 0.899 | 0.61 (0.36–1.05); 0.077 | 0.81 (0.56–1.17); 0.258 | |
| All: 0.9 (0.6–1.35); 0.611 | 0.75 (0.49–1.14); 0.177 | 0.87 (0.67–1.11); 0.261 | |
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| rs1859962; HNF1B | AAM: 1.03 (0.61–1.74); 0.905 | 1.23 (0.54–2.81); 0.626 | 1.06 (0.72–1.56); 0.752 |
| EAM: 1.38 (0.77–2.45); 0.278 | 1.00 (0.57–1.76); 0.997 | 1.13 (0.79–1.6); 0.508 | |
| All: 1.16 (0.8–1.69); 0.431 | 1.06 (0.67–1.69); 0.790 | 1.09 (0.85–1.4); 0.503 | |
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| rs7501939; HNF1B | AAM: 1.34 (0.73–2.47); 0.343 |
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| EAM: 0.82 (0.5–1.35); 0.439 | 1.13 (0.54–2.38); 0.742 | 0.93 (0.65–1.33); 0.692 | |
| All: 0.99 (0.68–1.45); 0.981 |
| 1.18 (0.92–1.52); 0.187 | |
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| rs4430796; HNF1B | AAM: | 0.64 (0.29–1.42); 0.272 |
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| EAM: 1.27 (0.7–2.3); 0.439 | 0.98 (0.57–1.68); 0.946 | 1.07 (0.76–1.51); 0.689 | |
| All: 0.81 (0.55–1.18); 0.273 | 0.86 (0.59–1.33); 0.500 | 0.87 (0.69–1.12); 0.279 | |
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| rs2070874; IL4 | AAM: 0.94 (0.54–1.64); 0.824 | 1.45 (0.7–3.0); 0.314 | 1.08 (0.73–1.59); 0.700 |
| EAM: 0.65 (0.38–1.11); 0.115 | 0.92 (0.22–3.93); 0.916 | 0.72 (0.45–1.14); 0.161 | |
| All: 0.82 (0.57–1.17); 0.275 | 1.32 (0.7–2.49); 0.386 | 0.94 (0.71–1.24); 0.649 | |
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| rs627839; RNASEL | AAM: 1.2 (0.7–2.06); 0.511 | 1.63 (0.78–3.42); 0.192 | 1.24 (0.85–1.83); 0.252 |
| EAM: 0.86 (0.5–1.47); 0.571 | 0.99 (0.55–1.8); 0.986 | 0.94 (0.67–1.32); 0.710 | |
| All: 1.01 (0.69–1.48); 0.952 | 1.21 (0.76–1.91); 0.427 | 1.06 (0.83–1.37); 0.632 | |
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| rs4962416; CTBP2 | AAM: 0.9 (0.5–1.59); 0.709 | 5.65 (0.62–51.7); 0.125 | 1.05 (0.63–1.74); 0.861 |
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| 1.72 (0.68–4.31); 0.251 |
| |
| All: 1.28 (0.88–1.85); 0.198 | 2.12 (0.92–4.9); 0.0784 | 1.31 (0.97–1.78); 0.083 | |
Bolded values denote statistically significant associations.
Age-adjusted association between selected anthropometric variables and PCa in men stratifying by race and combined.
| AAM | EAM | |
|---|---|---|
| OR (95% CI); | OR (95% CI); | |
| Height (inches) | 0.98 (0.9–1.05); 0.54 |
|
| BMI (kg/m2) |
| 0.98 (0.93–1.023); 0.33 |
| <30 (nonobese) | 1.0 | 1.0 |
| ≥30 (obese) |
| 0.90 (0.54–1.51); 0.69 |
Bold denotes statistically significant associations.
rs7501939 and rs4430796 as PCa risk factors in AAM stratified by BMI.
| Nonobese AAM | Obese AAM | All AAM | |
|---|---|---|---|
| rs7501939 | 1.09 (0.65–1.83); 0.75 |
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| rs4430796 | 0.84 (0.49–1.43); 0.52 | 0.67 (0.37–1.20); 0.18 |
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Statistically significant associations are shown in bold. Data is age adjusted.
SNPs reported to be in LD regions with our SNPs of interest.
| SNP of interest |
|
| Disease and comments |
|---|---|---|---|
| rs7501939 in AAM | None | rs11657964 ( | None reported to be associated with prostate cancer or any other disease |
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| rs4430796 in AAM | None | None | NA |
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| rs4962416 in EAM | rs4962720 ( | 14 additional SNPs | rs12769019: slightly increased risk for prostate cancer in EAM (OR = 1.1) [ |