Literature DB >> 24386526

Multiscale Fuzzy C-Means Image Classification for Multiple Weighted MR Images for the Assessment of Photodynamic Therapy in Mice.

Hesheng Wang1, Denise Feyes2, John Mulvihill2, Nancy Oleinick2, Gregory Maclennan3, Baowei Fei4.   

Abstract

We are investigating in vivo small animal imaging and analysis methods for the assessment of photodynamic therapy (PDT), an emerging therapeutic modality for cancer treatment. Multiple weighted MR images were acquired from tumor-bearing mice pre- and post-PDT and 24-hour after PDT. We developed an automatic image classification method to differentiate live, necrotic and intermediate tissues within the treated tumor on the MR images. We used a multiscale diffusion filter to process the MR images before classification. A multiscale fuzzy C-means (FCM) classification method was applied along the scales. The object function of the standard FCM was modified to allow multiscale classification processing where the result from a coarse scale is used to supervise the classification in the next scale. The multiscale fuzzy C-means (MFCM) method takes noise levels and partial volume effects into the classification processing. The method was validated by simulated MR images with various noise levels. For simulated data, the classification method achieved 96.0 ± 1.1% overlap ratio. For real mouse MR images, the classification results of the treated tumors were validated by histologic images. The overlap ratios were 85.6 ± 5.1%, 82.4 ± 7.8% and 80.5 ± 10.2% for the live, necrotic, and intermediate tissues, respectively. The MR imaging and the MFCM classification methods may provide a useful tool for the assessment of the tumor response to photodynamic therapy in vivo.

Entities:  

Keywords:  Fuzzy C-Means; Image classification; Multiscale; Photodynamic Treatment (PDT); magnetic resonance imaging (MRI); small animal imaging

Year:  2007        PMID: 24386526      PMCID: PMC3877232          DOI: 10.1117/12.710188

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  14 in total

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Authors:  D L Pham; J L Prince
Journal:  IEEE Trans Med Imaging       Date:  1999-09       Impact factor: 10.048

2.  A modified fuzzy C-means algorithm for bias field estimation and segmentation of MRI data.

Authors:  Mohamed N Ahmed; Sameh M Yamany; Nevin Mohamed; Aly A Farag; Thomas Moriarty
Journal:  IEEE Trans Med Imaging       Date:  2002-03       Impact factor: 10.048

Review 3.  Photodynamic therapy update.

Authors:  M F Shuler; J L Borrillo; A C Ho
Journal:  Curr Opin Ophthalmol       Date:  2001-06       Impact factor: 3.761

4.  An adaptive spatial fuzzy clustering algorithm for 3-D MR image segmentation.

Authors:  Alan Wee-Chung Liew; Hong Yan
Journal:  IEEE Trans Med Imaging       Date:  2003-09       Impact factor: 10.048

5.  A Convergence Theorem for the Fuzzy ISODATA Clustering Algorithms.

Authors:  J C Bezdek
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1980-01       Impact factor: 6.226

6.  Comparison and validation of tissue modelization and statistical classification methods in T1-weighted MR brain images.

Authors:  Meritxell Bach Cuadra; Leila Cammoun; Torsten Butz; Olivier Cuisenaire; Jean-Philippe Thiran
Journal:  IEEE Trans Med Imaging       Date:  2005-12       Impact factor: 10.048

7.  Deformable and rigid registration of MRI and microPET images for photodynamic therapy of cancer in mice.

Authors:  Baowei Fei; Hesheng Wang; Raymond F Muzic; Chris Flask; David L Wilson; Jeffrey L Duerk; Denise K Feyes; Nancy L Oleinick
Journal:  Med Phys       Date:  2006-03       Impact factor: 4.071

8.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

9.  New phthalocyanine photosensitizers for photodynamic therapy.

Authors:  N L Oleinick; A R Antunez; M E Clay; B D Rihter; M E Kenney
Journal:  Photochem Photobiol       Date:  1993-02       Impact factor: 3.421

Review 10.  Review of MR image segmentation techniques using pattern recognition.

Authors:  J C Bezdek; L O Hall; L P Clarke
Journal:  Med Phys       Date:  1993 Jul-Aug       Impact factor: 4.071

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  9 in total

1.  Automatic Tissue Classification for High-resolution Breast CT Images Based on Bilateral Filtering.

Authors:  Xiaofeng Yang; Ioannis Sechopoulos; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-14

2.  Multiscale segmentation of the skull in MR images for MRI-based attenuation correction of combined MR/PET.

Authors:  Xiaofeng Yang; Baowei Fei
Journal:  J Am Med Inform Assoc       Date:  2013-06-12       Impact factor: 4.497

3.  Automatic Segmentation of Right Ventricle on Ultrasound Images Using Sparse Matrix Transform and Level Set.

Authors:  Xulei Qin; Zhibin Cong; Luma V Halig; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-13

4.  A multiscale and multiblock fuzzy C-means classification method for brain MR images.

Authors:  Xiaofeng Yang; Baowei Fei
Journal:  Med Phys       Date:  2011-06       Impact factor: 4.071

5.  Automatic 3D Segmentation of Ultrasound Images Using Atlas Registration and Statistical Texture Prior.

Authors:  Xiaofeng Yang; David Schuster; Viraj Master; Peter Nieh; Aaron Fenster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-01

6.  Nonrigid Registration and Classification of the Kidneys in 3D Dynamic Contrast Enhanced (DCE) MR Images.

Authors:  Xiaofeng Yang; Pegah Ghafourian; Puneet Sharma; Khalil Salman; Diego Martin; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-13

7.  Biodistribution Study of Nanoparticle Encapsulated Photodynamic Therapy Drugs Using Multispectral Imaging.

Authors:  Luma V Halig; Dongsheng Wang; Andrew Y Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-29

8.  Detection of Cancer Metastasis Using a Novel Macroscopic Hyperspectral Method.

Authors:  Hamed Akbari; Luma V Halig; Hongzheng Zhang; Dongsheng Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-03-23

9.  A MR Brain Classification Method Based on Multiscale and Multiblock Fuzzy C-means.

Authors:  Xiaofeng Yang; Baowei Fei
Journal:  Int Conf Bioinform Biomed Eng       Date:  2011
  9 in total

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